Summary ?
GeneID367
SymbolAR
SynonymsAIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM
Descriptionandrogen receptor
ReferenceMIM:313700|HGNC:HGNC:644|Ensembl:ENSG00000169083|HPRD:02437|Vega:OTTHUMG00000021740
Gene typeprotein-coding
Map locationXq12
Fetal beta-0.408

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS
PMID:cooccurHigh-throughput literature-searchSystematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
AssociationA combined odds ratio method (Sun et al. 2008), association studies1Link to SZGene
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: schizophrenia,schizophrenic,schizophrenics,schizotypy,schizophrenias,schizotypalClick to show details
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.1813 

Section I. Genetics and epigenetics annotation


Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression during devlopment (BrainCloud)

Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section III. Gene Ontology annotation

Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005102receptor bindingIPINeurotransmitter (GO term level: 4)11875111 
GO:0004872receptor activityIEA-
GO:0004882androgen receptor activityIEA-
GO:0004882androgen receptor activityNAS10075738 
GO:0004882androgen receptor activityTAS15572661 
GO:0003700transcription factor activityIDA15572661 
GO:0003700transcription factor activityIEA-
GO:0005496steroid bindingIEA-
GO:0005497androgen bindingNAS10075738 
GO:0008270zinc ion bindingIEA-
GO:0046872metal ion bindingIEA-
GO:0043565sequence-specific DNA bindingIEA-
GO:0046983protein dimerization activityNAS10075738 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0001701in utero embryonic developmentIEA-
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0006350transcriptionIEA-
GO:0016049cell growthNAS15572661 
GO:0007267cell-cell signalingTAS10835690 
GO:0007165signal transductionTAS10835690 
GO:0008283cell proliferationNAS10075738 
GO:0008584male gonad developmentIEA-
GO:0007548sex differentiationNAS10075738 
GO:0006810transportTAS10835690 
GO:0030850prostate gland developmentNAS10075738 
GO:0019102male somatic sex determinationIEA-
GO:0030521androgen receptor signaling pathwayIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA15572661 
GO:0005634nucleusIEA-
GO:0005737cytoplasmIDA15572661 

Section IV. Protein-protein interaction annotation

InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
AESAES-1 | AES-2 | ESP1 | GRG | GRG5 | TLE5amino-terminal enhancer of split-HPRD,BioGRID11416139 
AKT1AKT | MGC99656 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHAv-akt murine thymoma viral oncogene homolog 1Akt phosphorylates AR.BIND11404460 |12621049 
AKT1AKT | MGC99656 | PKB | PKB-ALPHA | PRKBA | RAC | RAC-ALPHAv-akt murine thymoma viral oncogene homolog 1Affinity Capture-Western
Reconstituted Complex
BioGRID11404460 
ARAIS | DHTR | HUMARA | KD | NR3C4 | SBMA | SMAX1 | TFMandrogen receptorBiochemical Activity
Co-crystal Structure
Protein-peptide
Two-hybrid
BioGRID11504717 |12612084 
|12682292 |14593076 
|14729952 |14966121 
|14966297 |15062556 
|15256534 |15525515 
BAG1RAP46BCL2-associated athanogene-HPRD,BioGRID11278763 
BRCA1BRCAI | BRCC1 | IRIS | PSCP | RNF53breast cancer 1, early onset-HPRD,BioGRID11016951 |11085509 
CALM1CALML2 | CAMI | DD132 | PHKDcalmodulin 1 (phosphorylase kinase, delta)Affinity Capture-Western
Co-localization
Reconstituted Complex
BioGRID14695896 
CALRCRT | FLJ26680 | RO | SSA | cC1qRcalreticulin-HPRD,BioGRID8107809 
CASP1ICE | IL1BC | P45caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)Androgen Receptor interacts with caspase 1. This interaction was modeled on a demonstrated interaction between human androgen receptor and caspase 1 from an unspecified species.BIND9535906 
CASP3CPP32 | CPP32B | SCA-1caspase 3, apoptosis-related cysteine peptidaseAndrogen Receptor interacts with caspase 3. This interaction was modeled on a demonstrated interaction between human androgen receptor and caspase 3 from an unspecified species.BIND9535906 
CASP7CMH-1 | ICE-LAP3 | MCH3caspase 7, apoptosis-related cysteine peptidaseAndrogen Receptor interacts with caspase 7.BIND9535906 
CASP8ALPS2B | CAP4 | FLICE | FLJ17672 | MACH | MCH5 | MGC78473caspase 8, apoptosis-related cysteine peptidaseAndrogen Receptor interacts with caspase 8.BIND9535906 
CAV1CAV | MSTP085 | VIP21caveolin 1, caveolae protein, 22kDa-HPRD,BioGRID11278309 
CAV1CAV | MSTP085 | VIP21caveolin 1, caveolae protein, 22kDaCaveolin-1 interacts with AR.BIND11278309 
CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D1-HPRD,BioGRID10344732 
CCNE1CCNEcyclin E1-HPRD,BioGRID10953010 
CCNHCAK | p34 | p37cyclin HReconstituted ComplexBioGRID10734072 
CDC25B-cell division cycle 25 homolog B (S. pombe)-HPRD,BioGRID12569365 
CDC37P50CDC37cell division cycle 37 homolog (S. cerevisiae)-HPRD,BioGRID11085988 
CDK7CAK1 | CDKN7 | MO15 | STK1 | p39MO15cyclin-dependent kinase 7Affinity Capture-Western
Reconstituted Complex
BioGRID10734072 
CDK9C-2k | CDC2L4 | CTK1 | PITALRE | TAKcyclin-dependent kinase 9-HPRD,BioGRID11266437 
CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein (C/EBP), alphaReconstituted ComplexBioGRID9817600 
CEBPBC/EBP-beta | CRP2 | IL6DBP | LAP | MGC32080 | NF-IL6 | TCF5CCAAT/enhancer binding protein (C/EBP), betaReconstituted ComplexBioGRID9817600 
COX5BCOXVBcytochrome c oxidase subunit Vb-HPRD,BioGRID11719263 
CREBBPCBP | KAT3A | RSTSCREB binding protein-HPRD,BioGRID9482849 
CTNNB1CTNNB | DKFZp686D02253 | FLJ25606 | FLJ37923catenin (cadherin-associated protein), beta 1, 88kDa-HPRD,BioGRID11916967 
DAP3DAP-3 | DKFZp686G12159 | MGC126058 | MGC126059 | MRP-S29 | MRPS29 | bMRP-10death associated protein 3-HPRD,BioGRID10903152 
DAXXBING2 | DAP6 | EAP1 | MGC126245 | MGC126246death-domain associated proteinAffinity Capture-Western
Reconstituted Complex
Two-hybrid
BioGRID15572661 
DCCCRC18 | CRCR1deleted in colorectal carcinomaAffinity Capture-Western
Reconstituted Complex
Two-hybrid
BioGRID12864730 
EFCAB6DJBP | FLJ23588 | HSCBCIP1 | KIAA1672 | dJ185D5.1EF-hand calcium binding domain 6-HPRD,BioGRID12612053 
EGFRERBB | ERBB1 | HER1 | PIG61 | mENAepidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)Affinity Capture-Western
Co-localization
BioGRID15288768 |15305378 
ESR1DKFZp686N23123 | ER | ESR | ESRA | Era | NR3A1estrogen receptor 1-HPRD,BioGRID12389206 
ETV5ERMets variant 5Reconstituted ComplexBioGRID8798622 
ETV5ERMets variant 5-HPRD11509567 
FGF8AIGF | HBGF-8 | MGC149376fibroblast growth factor 8 (androgen-induced)AR interacts with FGF8 promoter.BIND12140757 
FHL2AAG11 | DRAL | SLIM3four and a half LIM domains 2-HPRD,BioGRID10654935 
FLNAABP-280 | ABPX | DKFZp434P031 | FLN | FLN1 | FMD | MNS | NHBP | OPD | OPD1 | OPD2filamin A, alpha (actin binding protein 280)-HPRD,BioGRID12682292 
FOXA1HNF3A | MGC33105 | TCF3Aforkhead box A1-HPRD,BioGRID12750453 
FOXO1FKH1 | FKHR | FOXO1Aforkhead box O1-HPRD,BioGRID12482965 
GAPDHG3PD | GAPD | MGC88685glyceraldehyde-3-phosphate dehydrogenase-HPRD,BioGRID8872471 
GNB2L1Gnb2-rs1 | H12.3 | HLC-7 | PIG21 | RACK1guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1-HPRD,BioGRID12958311 
GRIP1GRIPglutamate receptor interacting protein 1Two-hybridBioGRID10607837 
GSK3ADKFZp686D0638glycogen synthase kinase 3 alphaAffinity Capture-WesternBioGRID15361837 
GSK3B-glycogen synthase kinase 3 betaAffinity Capture-Western
Reconstituted Complex
BioGRID15178691 
GSNDKFZp313L0718gelsolin (amyloidosis, Finnish type)-HPRD,BioGRID12941811 
GTF2F1BTF4 | RAP74 | TF2F1 | TFIIFgeneral transcription factor IIF, polypeptide 1, 74kDa-HPRD,BioGRID9238003 
GTF2F2BTF4 | RAP30 | TF2F2 | TFIIFgeneral transcription factor IIF, polypeptide 2, 30kDa-HPRD,BioGRID9238003 
GTF2H1BTF2 | TFB1 | TFIIHgeneral transcription factor IIH, polypeptide 1, 62kDa-HPRD,BioGRID10734072 |11266437 
HDAC1DKFZp686H12203 | GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 1-HPRD,BioGRID11994312 
HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 3Reconstituted ComplexBioGRID12943985 
HDAC4HA6116 | HD4 | HDAC-A | HDACA | KIAA0288histone deacetylase 4Reconstituted ComplexBioGRID12943985 
HMGB1DKFZp686A04236 | HMG1 | HMG3 | SBP-1high-mobility group box 1-HPRD,BioGRID9671457 
HMGB2HMG2high-mobility group box 2Reconstituted ComplexBioGRID9671457 
HNF4AFLJ39654 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4, alphaCo-localizationBioGRID12944908 
HSP90AA1FLJ31884 | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP2heat shock protein 90kDa alpha (cytosolic), class A member 1-HPRD,BioGRID1525041 
HSPA1AFLJ54303 | FLJ54370 | FLJ54392 | FLJ54408 | FLJ75127 | HSP70-1 | HSP70-1A | HSP70I | HSP72 | HSPA1 | HSPA1Bheat shock 70kDa protein 1AAffinity Capture-WesternBioGRID1540595 
IDEFLJ35968 | INSULYSINinsulin-degrading enzyme-HPRD8051160 
IL6STCD130 | CDw130 | GP130 | GP130-RAPS | IL6R-betainterleukin 6 signal transducer (gp130, oncostatin M receptor)Affinity Capture-WesternBioGRID15129430 
JUNAP-1 | AP1 | c-Junjun oncogene-HPRD,BioGRID8798722 |9211894 
KAT5ESA1 | HTATIP | HTATIP1 | PLIP | TIP | TIP60 | cPLA2K(lysine) acetyltransferase 5Biochemical Activity
Two-hybrid
BioGRID11994312 
KAT5ESA1 | HTATIP | HTATIP1 | PLIP | TIP | TIP60 | cPLA2K(lysine) acetyltransferase 5-HPRD10364196 
KLK2KLK2A2 | MGC12201 | hK2kallikrein-related peptidase 2AR interacts with p-KLK-2.BIND15542435 
KLK3APS | KLK2A1 | PSA | hK3kallikrein-related peptidase 3AR interacts with p-PSA.BIND15542435 
MAGEA11MAGE-11 | MAGE11 | MAGEA-11 | MGC10511melanoma antigen family A, 11Affinity Capture-Western
Co-localization
Reconstituted Complex
Two-hybrid
BioGRID15684378 
MAPK1ERK | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapkmitogen-activated protein kinase 1Reconstituted ComplexBioGRID10318905 
MDM2HDMX | MGC71221 | hdm2Mdm2 p53 binding protein homolog (mouse)-HPRD12145204 
MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | MGC71488 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 1-HPRD,BioGRID12218053 
MED14CRSP150 | CRSP2 | CSRP | CXorf4 | DRIP150 | EXLM1 | MGC104513 | RGR1 | TRAP170mediator complex subunit 14-HPRD,BioGRID12218053 
MYBBP1AFLJ37886 | P160 | PAP2MYB binding protein (P160) 1a-HPRD11779876 
MYST2HBO1 | HBOA | KAT7MYST histone acetyltransferase 2-HPRD,BioGRID10930412 
NCOA1F-SRC-1 | KAT13A | MGC129719 | MGC129720 | NCoA-1 | RIP160 | SRC-1 | SRC1 | bHLHe42nuclear receptor coactivator 1SRC-1a interacts with AR.BIND10454563 
NCOA1F-SRC-1 | KAT13A | MGC129719 | MGC129720 | NCoA-1 | RIP160 | SRC-1 | SRC1 | bHLHe42nuclear receptor coactivator 1-HPRD,BioGRID10567563 
NCOA1F-SRC-1 | KAT13A | MGC129719 | MGC129720 | NCoA-1 | RIP160 | SRC-1 | SRC1 | bHLHe42nuclear receptor coactivator 1SRC-1e interacts with AR.BIND10454563 
NCOA2GRIP1 | KAT13C | MGC138808 | NCoA-2 | TIF2nuclear receptor coactivator 2Affinity Capture-Western
Protein-peptide
Reconstituted Complex
Two-hybrid
BioGRID12612084 |12810069 
|14593076 |14966121 
NCOA2GRIP1 | KAT13C | MGC138808 | NCoA-2 | TIF2nuclear receptor coactivator 2GRIP1 interacts with AR. This interaction was modeled on a demonstrated interaction between mouse GRIP1 and human AR.BIND10454563 
NCOA2GRIP1 | KAT13C | MGC138808 | NCoA-2 | TIF2nuclear receptor coactivator 2-HPRD9717843 
NCOA2GRIP1 | KAT13C | MGC138808 | NCoA-2 | TIF2nuclear receptor coactivator 2-HPRD9717843 |12588987 
NCOA3ACTR | AIB-1 | AIB1 | CAGH16 | CTG26 | KAT13B | MGC141848 | RAC3 | SRC3 | TNRC14 | TNRC16 | TRAM-1 | pCIPnuclear receptor coactivator 3-HPRD,BioGRID10965917 
NCOA4ARA70 | DKFZp762E1112 | ELE1 | PTC3 | RFGnuclear receptor coactivator 4-HPRD8643607 |9892017 
|10517667 |11818501 
NCOA4ARA70 | DKFZp762E1112 | ELE1 | PTC3 | RFGnuclear receptor coactivator 4Far Western
Protein-peptide
Reconstituted Complex
Two-hybrid
BioGRID8643607 |9636157 
|9892017 |10318905 
|10517667 |11404460 
|11779876 |11818501 
|12612084 |14966297 
NCOA6AIB3 | ANTP | ASC2 | HOX1.1 | HOXA7 | KIAA0181 | NRC | PRIP | RAP250 | TRBPnuclear receptor coactivator 6Affinity Capture-Western
Two-hybrid
BioGRID14645241 
NCOR1KIAA1047 | MGC104216 | N-CoR | TRAC1 | hCIT529I10 | hN-CoRnuclear receptor co-repressor 1-HPRD,BioGRID12089345 
NCOR2CTG26 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC-1 | TRAC1nuclear receptor co-repressor 2Affinity Capture-Western
Co-localization
Reconstituted Complex
Two-hybrid
BioGRID11923464 |12441355 
|14593076 
NFKB1DKFZp686C01211 | EBP-1 | KBF1 | MGC54151 | NF-kappa-B | NFKB-p105 | NFKB-p50 | p105nuclear factor of kappa light polypeptide gene enhancer in B-cells 1-HPRD8798655 
NISCHFLJ14425 | FLJ40413 | FLJ90519 | I-1 | IRAS | KIAA0975nischarin-HPRD,BioGRID15028622 
NONONMT55 | NRB54 | P54 | P54NRBnon-POU domain containing, octamer-binding-HPRD,BioGRID12810069 
NR0B1AHC | AHCH | AHX | DAX-1 | DAX1 | DSS | GTD | HHG | NROB1nuclear receptor subfamily 0, group B, member 1-HPRD,BioGRID11875111 
NR0B2FLJ17090 | SHP | SHP1nuclear receptor subfamily 0, group B, member 2-HPRD,BioGRID11735420 
NR2C1TR2nuclear receptor subfamily 2, group C, member 1-HPRD,BioGRID12949936 
NR2C2TAK1 | TR2R1 | TR4 | hTAK1nuclear receptor subfamily 2, group C, member 2-HPRD,BioGRID10611280 
NR3C1GCCR | GCR | GR | GRLnuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-HPRD,BioGRID9162033 
NSD1ARA267 | DKFZp666C163 | FLJ10684 | FLJ22263 | FLJ44628 | KMT3B | SOTOS | STOnuclear receptor binding SET domain protein 1-HPRD11509567 
NSD1ARA267 | DKFZp666C163 | FLJ10684 | FLJ22263 | FLJ44628 | KMT3B | SOTOS | STOnuclear receptor binding SET domain protein 1-HPRD,BioGRID11266437|11509567 
PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G4, 38kDaAffinity Capture-Western
Reconstituted Complex
BioGRID12165860 
PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G4, 38kDa-HPRD9565586 
PAK6PAK5p21 protein (Cdc42/Rac)-activated kinase 6-HPRD,BioGRID11278661 
PATZ1MAZR | PATZ | RIAZ | ZBTB19 | ZNF278 | ZSG | dJ400N23POZ (BTB) and AT hook containing zinc finger 1Affinity Capture-WesternBioGRID11719514 
PELP1HMX3 | MNAR | P160proline, glutamate and leucine rich protein 1-HPRD,BioGRID12415108 
PIAS1DDXBP1 | GBP | GU/RH-II | MGC141878 | MGC141879 | ZMIZ3protein inhibitor of activated STAT, 1-HPRD11877418 
PIAS1DDXBP1 | GBP | GU/RH-II | MGC141878 | MGC141879 | ZMIZ3protein inhibitor of activated STAT, 1Two-hybridBioGRID11117529 
PIAS2MGC102682 | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4 | mizprotein inhibitor of activated STAT, 2Reconstituted Complex
Two-hybrid
BioGRID9920921 |11117529 
PIAS3FLJ14651 | ZMIZ5protein inhibitor of activated STAT, 3Two-hybridBioGRID11117529 
PIAS4FLJ12419 | MGC35296 | PIASY | Piasg | ZMIZ6protein inhibitor of activated STAT, 4-HPRD,BioGRID11439351 
PNRC1B4-2 | PNAS-145 | PROL2 | PRR2 | RP11-63L7.5proline-rich nuclear receptor coactivator 1-HPRD10428808 
PNRC2FLJ20312 | MGC99541proline-rich nuclear receptor coactivator 2-HPRD10894149 
POU2F1OCT1 | OTF1POU class 2 homeobox 1-HPRD,BioGRID10480874 
POU2F2OCT2 | OTF2 | Oct-2POU class 2 homeobox 2Reconstituted ComplexBioGRID10480874 
PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptideAffinity Capture-MSBioGRID15640154 
PRMT1ANM1 | HCP1 | HRMT1L2 | IR1B4protein arginine methyltransferase 1Reconstituted ComplexBioGRID11050077 
PRPF6ANT-1 | C20orf14 | TOM | U5-102K | hPrp6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)-HPRD,BioGRID12039962 
PSPC1DKFZp566B1447 | FLJ10955 | PSP1paraspeckle component 1Affinity Capture-MSBioGRID12810069 
PTEN10q23del | BZS | MGC11227 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homologAffinity Capture-Western
Reconstituted Complex
BioGRID15205473 
RAC3-ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)-HPRD11747336 
RAD9ARAD9RAD9 homolog A (S. pombe)Two-hybridBioGRID14966297 
RAF1CRAF | NS5 | Raf-1 | c-Rafv-raf-1 murine leukemia viral oncogene homolog 1-HPRD,BioGRID8349631 
RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family-HPRD,BioGRID10400640 
RANBP9RANBPMRAN binding protein 9-HPRD,BioGRID12361945 
RB1OSRC | RB | p105-Rb | pRb | pp110retinoblastoma 1Rb interacts with AR.BIND9675141 
RB1OSRC | RB | p105-Rb | pRb | pp110retinoblastoma 1-HPRD,BioGRID9675141 
RCHY1ARNIP | CHIMP | DKFZp586C1620 | PIRH2 | PRO1996 | RNF199 | ZNF363 | hARNIPring finger and CHY zinc finger domain containing 1-HPRD,BioGRID12200228 
RELAMGC131774 | NFKB3 | p65v-rel reticuloendotheliosis viral oncogene homolog A (avian)-HPRD8798655 
RNF14ARA54 | FLJ26004 | HFB30 | HRIHFB2038 | TRIAD2ring finger protein 14-HPRD,BioGRID10085091 
RNF4RES4-26 | SNURFring finger protein 4-HPRD,BioGRID9710597 |10617653 
|11719514 
SART3DSAP1 | KIAA0156 | MGC138188 | P100 | RP11-13G14 | TIP110 | p110 | p110(nrb)squamous cell carcinoma antigen recognized by T cells 3-HPRD,BioGRID15031286 
SELENBP1FLJ13813 | LPSB | SP56 | hSBP | hSP56selenium binding protein 1Affinity Capture-WesternBioGRID1540595 
SLC25A4AAC1 | ANT | ANT1 | PEO2 | PEO3 | T1solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4-HPRD12039962 
SMAD3DKFZp586N0721 | DKFZp686J10186 | HSPC193 | HsT17436 | JV15-2 | MADH3 | MGC60396SMAD family member 3-HPRD,BioGRID11280774 
SMAD4DPC4 | JIP | MADH4SMAD family member 4-HPRD,BioGRID12226080 
SMARCA4BAF190 | BRG1 | FLJ39786 | SNF2 | SNF2-BETA | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4Affinity Capture-WesternBioGRID14966121 
SMARCC1BAF155 | CRACC1 | Rsc8 | SRG3 | SWI3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1Affinity Capture-WesternBioGRID14966121 
SP1-Sp1 transcription factorAffinity Capture-WesternBioGRID15661808 
SPDEFPDEF | RP11-375E1__A.3 | bA375E1.3SAM pointed domain containing ets transcription factor-HPRD,BioGRID10625666 
SRCASV | SRC1 | c-SRC | p60-Srcv-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)Affinity Capture-Western
Two-hybrid
BioGRID11032808 |15027889 
|15466214 
SRYTDF | TDYsex determining region Y-HPRD,BioGRID11585838 
STAT3APRF | FLJ20882 | HIES | MGC16063signal transducer and activator of transcription 3 (acute-phase response factor)-HPRD,BioGRID11751884 
SVILDKFZp686A17191supervillin-HPRD,BioGRID11792840 
TBPGTF2D | GTF2D1 | MGC117320 | MGC126054 | MGC126055 | SCA17 | TFIIDTATA box binding proteinReconstituted ComplexBioGRID9238003 
TCF4E2-2 | ITF2 | MGC149723 | MGC149724 | PTHS | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | bHLHb19transcription factor 4-HPRD,BioGRID12799378 
TDG-thymine-DNA glycosylaseReconstituted ComplexBioGRID12874288 
TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 1-HPRD11155740 
TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 1The carboxy terminus of ARA55 interacts with the carboxy terminus AR to enhance transcriptional activity.BIND10075738 
TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 1Affinity Capture-Western
Protein-peptide
Reconstituted Complex
Two-hybrid
BioGRID11779876 |11856738 
TMF1ARA160TATA element modulatory factor 1Far Western
Reconstituted Complex
Two-hybrid
BioGRID10428808 
TMF1ARA160TATA element modulatory factor 1-HPRD12165860 
TP53FLJ92943 | LFS1 | TRP53 | p53tumor protein p53Biochemical Activity
Phenotypic Suppression
BioGRID11504717 
TRIM24PTC6 | RNF82 | TF1A | TIF1 | TIF1A | TIF1ALPHA | hTIF1tripartite motif-containing 24-HPRD,BioGRID9115274 
TSG101TSG10 | VPS23tumor susceptibility gene 101-HPRD,BioGRID10508170 
UBE2IC358B7.1 | P18 | UBC9ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)Affinity Capture-Western
Phenotypic Enhancement
Two-hybrid
BioGRID10383460 
UBE2IC358B7.1 | P18 | UBC9ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)-HPRD8798622 
UXTART-27ubiquitously-expressed transcript-HPRD,BioGRID11854421 
XRCC5FLJ39089 | KARP-1 | KARP1 | KU80 | KUB2 | Ku86 | NFIVX-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)Reconstituted ComplexBioGRID15640154 
XRCC6CTC75 | CTCBF | G22P1 | KU70 | ML8 | TLAAX-ray repair complementing defective repair in Chinese hamster cells 6Affinity Capture-WesternBioGRID15640154 
YWHAQ14-3-3 | 1C5 | HS1tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptideReconstituted ComplexBioGRID11266503 
ZMIZ1FLJ13541 | KIAA1224 | MIZ | RAI17 | Zimp10 | hZIMP10zinc finger, MIZ-type containing 1-HPRD,BioGRID14609956 


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
KEGG OOCYTE MEIOSIS 11479All SZGR 2.0 genes in this pathway
KEGG PATHWAYS IN CANCER 328259All SZGR 2.0 genes in this pathway
KEGG PROSTATE CANCER 8975All SZGR 2.0 genes in this pathway
ST ADRENERGIC 3629All SZGR 2.0 genes in this pathway
PID SMAD2 3NUCLEAR PATHWAY 8263All SZGR 2.0 genes in this pathway
PID AR PATHWAY 6146All SZGR 2.0 genes in this pathway
PID AR TF PATHWAY 5338All SZGR 2.0 genes in this pathway
PID AR NONGENOMIC PATHWAY 3127All SZGR 2.0 genes in this pathway
PID BETA CATENIN NUC PATHWAY 8060All SZGR 2.0 genes in this pathway
PID HNF3A PATHWAY 4429All SZGR 2.0 genes in this pathway
PID HES HEY PATHWAY 4839All SZGR 2.0 genes in this pathway
REACTOME GENERIC TRANSCRIPTION PATHWAY 352181All SZGR 2.0 genes in this pathway
REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY 4936All SZGR 2.0 genes in this pathway
CHEMNITZ RESPONSE TO PROSTAGLANDIN E2 DN 391222All SZGR 2.0 genes in this pathway
CHANDRAN METASTASIS TOP50 UP 3827All SZGR 2.0 genes in this pathway
CHARAFE BREAST CANCER LUMINAL VS BASAL UP 380215All SZGR 2.0 genes in this pathway
DOANE BREAST CANCER CLASSES UP 7238All SZGR 2.0 genes in this pathway
DOANE BREAST CANCER ESR1 UP 11272All SZGR 2.0 genes in this pathway
RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED DN 805505All SZGR 2.0 genes in this pathway
GOZGIT ESR1 TARGETS DN 781465All SZGR 2.0 genes in this pathway
ENK UV RESPONSE EPIDERMIS UP 293179All SZGR 2.0 genes in this pathway
CHEBOTAEV GR TARGETS DN 12073All SZGR 2.0 genes in this pathway
OUELLET CULTURED OVARIAN CANCER INVASIVE VS LMP DN 3520All SZGR 2.0 genes in this pathway
RIZ ERYTHROID DIFFERENTIATION 12HR 4335All SZGR 2.0 genes in this pathway
RASHI RESPONSE TO IONIZING RADIATION 3 4831All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER APOCRINE VS LUMINAL 326213All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER APOCRINE VS BASAL 330217All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER BASAL VS LULMINAL 330215All SZGR 2.0 genes in this pathway
FARMER BREAST CANCER CLUSTER 7 2011All SZGR 2.0 genes in this pathway
LIEN BREAST CARCINOMA METAPLASTIC VS DUCTAL DN 11458All SZGR 2.0 genes in this pathway
MOHANKUMAR TLX1 TARGETS UP 414287All SZGR 2.0 genes in this pathway
YANG BREAST CANCER ESR1 LASER UP 3425All SZGR 2.0 genes in this pathway
PUJANA BREAST CANCER LIT INT NETWORK 10173All SZGR 2.0 genes in this pathway
KHETCHOUMIAN TRIM24 TARGETS DN 87All SZGR 2.0 genes in this pathway
SCHAEFFER PROSTATE DEVELOPMENT 48HR DN 428306All SZGR 2.0 genes in this pathway
CHANG IMMORTALIZED BY HPV31 DN 6545All SZGR 2.0 genes in this pathway
KAYO AGING MUSCLE UP 244165All SZGR 2.0 genes in this pathway
BROWNE HCMV INFECTION 48HR DN 504323All SZGR 2.0 genes in this pathway
ZHU CMV 8 HR DN 5340All SZGR 2.0 genes in this pathway
ZHU CMV ALL DN 12893All SZGR 2.0 genes in this pathway
CUI TCF21 TARGETS 2 UP 428266All SZGR 2.0 genes in this pathway
MAHAJAN RESPONSE TO IL1A UP 8152All SZGR 2.0 genes in this pathway
HOWLIN CITED1 TARGETS 1 DN 3722All SZGR 2.0 genes in this pathway
LEIN MEDULLA MARKERS 8148All SZGR 2.0 genes in this pathway
GAVIN FOXP3 TARGETS CLUSTER P6 9144All SZGR 2.0 genes in this pathway
MASSARWEH TAMOXIFEN RESISTANCE UP 578341All SZGR 2.0 genes in this pathway
OUYANG PROSTATE CANCER MARKERS 1916All SZGR 2.0 genes in this pathway
SMID BREAST CANCER RELAPSE IN BRAIN DN 8558All SZGR 2.0 genes in this pathway
SMID BREAST CANCER ERBB2 UP 14783All SZGR 2.0 genes in this pathway
SMID BREAST CANCER BASAL DN 701446All SZGR 2.0 genes in this pathway
IZADPANAH STEM CELL ADIPOSE VS BONE DN 10868All SZGR 2.0 genes in this pathway
MATZUK MALE REPRODUCTION SERTOLI 2823All SZGR 2.0 genes in this pathway
LEE LIVER CANCER SURVIVAL UP 185112All SZGR 2.0 genes in this pathway
CHIANG LIVER CANCER SUBCLASS CTNNB1 UP 176110All SZGR 2.0 genes in this pathway
CHIANG LIVER CANCER SUBCLASS PROLIFERATION DN 17997All SZGR 2.0 genes in this pathway
HOSHIDA LIVER CANCER SURVIVAL DN 11376All SZGR 2.0 genes in this pathway
YAGI AML WITH INV 16 TRANSLOCATION 422277All SZGR 2.0 genes in this pathway
LI PROSTATE CANCER EPIGENETIC 3022All SZGR 2.0 genes in this pathway
CAIRO HEPATOBLASTOMA CLASSES DN 210141All SZGR 2.0 genes in this pathway
CHANDRAN METASTASIS UP 221135All SZGR 2.0 genes in this pathway
PANGAS TUMOR SUPPRESSION BY SMAD1 AND SMAD5 UP 13485All SZGR 2.0 genes in this pathway
SUBTIL PROGESTIN TARGETS 3625All SZGR 2.0 genes in this pathway
CHANGOLKAR H2AFY TARGETS DN 4026All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS UP 745475All SZGR 2.0 genes in this pathway
WANG MLL TARGETS 289188All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY 1839928All SZGR 2.0 genes in this pathway
ZWANG EGF INTERVAL DN 214124All SZGR 2.0 genes in this pathway

Section VI. microRNA annotation

miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-130/30171771Ahsa-miR-130abrainCAGUGCAAUGUUAAAAGGGCAU
hsa-miR-301CAGUGCAAUAGUAUUGUCAAAGC
hsa-miR-130bbrainCAGUGCAAUGAUGAAAGGGCAU
hsa-miR-454-3pUAGUGCAAUAUUGCUUAUAGGGUUU
miR-493-5p113119m8hsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU