Gene Page: SUPT3H
Summary ?
| GeneID | 8464 |
| Symbol | SUPT3H |
| Synonyms | SPT3|SPT3L |
| Description | SPT3 homolog, SAGA and STAGA complex component |
| Reference | MIM:602947|HGNC:HGNC:11466|Ensembl:ENSG00000196284|HPRD:04254|Vega:OTTHUMG00000014773 |
| Gene type | protein-coding |
| Map location | 6p21.1-p21.3 |
| Pascal p-value | 0.559 |
| DEG p-value | DEG:Sanders_2014:DS1_p=0.151:DS1_beta=0.023600:DS2_p=1.47e-07:DS2_beta=-0.255:DS2_FDR=2.82e-05 |
| Fetal beta | 1.771 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Nucleus accumbens basal ganglia Myers' cis & trans Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| DEG:Sanders_2013 | Microarray | Whole-genome gene expression profiles using microarrays on lymphoblastoid cell lines (LCLs) from 413 cases and 446 controls. | |
| GSMA_IIE | Genome scan meta-analysis (European-ancestry samples) | Psr: 0.04433 |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs1552196 | chr6 | 44698264 | SUPT3H | 8464 | 0.16 | cis | ||
| rs7349931 | chr6 | 44783673 | SUPT3H | 8464 | 0.14 | cis | ||
| rs10948176 | chr6 | 44833912 | SUPT3H | 8464 | 0.18 | cis | ||
| rs1418432 | 6 | 44691372 | SUPT3H | ENSG00000196284.9 | 1.933E-6 | 0 | 654318 | gtex_brain_ba24 |
| rs12198153 | 6 | 44691878 | SUPT3H | ENSG00000196284.9 | 1.929E-6 | 0 | 653812 | gtex_brain_ba24 |
| rs62435997 | 6 | 44692169 | SUPT3H | ENSG00000196284.9 | 1.928E-6 | 0 | 653521 | gtex_brain_ba24 |
| rs10456535 | 6 | 44692758 | SUPT3H | ENSG00000196284.9 | 1.914E-6 | 0 | 652932 | gtex_brain_ba24 |
| rs10456118 | 6 | 44692825 | SUPT3H | ENSG00000196284.9 | 1.91E-6 | 0 | 652865 | gtex_brain_ba24 |
| rs10456536 | 6 | 44692995 | SUPT3H | ENSG00000196284.9 | 1.889E-6 | 0 | 652695 | gtex_brain_ba24 |
| rs60328783 | 6 | 44693099 | SUPT3H | ENSG00000196284.9 | 1.878E-6 | 0 | 652591 | gtex_brain_ba24 |
| rs62435998 | 6 | 44695206 | SUPT3H | ENSG00000196284.9 | 1.872E-6 | 0 | 650484 | gtex_brain_ba24 |
| rs62435999 | 6 | 44695273 | SUPT3H | ENSG00000196284.9 | 1.877E-6 | 0 | 650417 | gtex_brain_ba24 |
| rs56172130 | 6 | 44696262 | SUPT3H | ENSG00000196284.9 | 1.936E-6 | 0 | 649428 | gtex_brain_ba24 |
| rs12204270 | 6 | 44697502 | SUPT3H | ENSG00000196284.9 | 2.026E-6 | 0 | 648188 | gtex_brain_ba24 |
| rs1552196 | 6 | 44698265 | SUPT3H | ENSG00000196284.9 | 2.095E-6 | 0 | 647425 | gtex_brain_ba24 |
| rs144904087 | 6 | 44705374 | SUPT3H | ENSG00000196284.9 | 2.496E-8 | 0 | 640316 | gtex_brain_ba24 |
| rs139953182 | 6 | 44705375 | SUPT3H | ENSG00000196284.9 | 2.496E-8 | 0 | 640315 | gtex_brain_ba24 |
| rs138807107 | 6 | 44707366 | SUPT3H | ENSG00000196284.9 | 5.136E-7 | 0 | 638324 | gtex_brain_ba24 |
| rs62436022 | 6 | 44709325 | SUPT3H | ENSG00000196284.9 | 2.85E-7 | 0 | 636365 | gtex_brain_ba24 |
| rs10807302 | 6 | 44710152 | SUPT3H | ENSG00000196284.9 | 4.265E-7 | 0 | 635538 | gtex_brain_ba24 |
| rs79427462 | 6 | 44712390 | SUPT3H | ENSG00000196284.9 | 1.946E-7 | 0 | 633300 | gtex_brain_ba24 |
| rs143027844 | 6 | 44717168 | SUPT3H | ENSG00000196284.9 | 2.141E-7 | 0 | 628522 | gtex_brain_ba24 |
| rs148182110 | 6 | 44717205 | SUPT3H | ENSG00000196284.9 | 2.371E-7 | 0 | 628485 | gtex_brain_ba24 |
| rs62436028 | 6 | 44721521 | SUPT3H | ENSG00000196284.9 | 5.88E-7 | 0 | 624169 | gtex_brain_ba24 |
| rs77082413 | 6 | 44722271 | SUPT3H | ENSG00000196284.9 | 2.164E-7 | 0 | 623419 | gtex_brain_ba24 |
| rs62437962 | 6 | 44725007 | SUPT3H | ENSG00000196284.9 | 5.755E-7 | 0 | 620683 | gtex_brain_ba24 |
| rs62437968 | 6 | 44729495 | SUPT3H | ENSG00000196284.9 | 4.22E-7 | 0 | 616195 | gtex_brain_ba24 |
| rs12215181 | 6 | 44736076 | SUPT3H | ENSG00000196284.9 | 4.284E-7 | 0 | 609614 | gtex_brain_ba24 |
| rs79419592 | 6 | 44738856 | SUPT3H | ENSG00000196284.9 | 4.352E-7 | 0 | 606834 | gtex_brain_ba24 |
| rs79265970 | 6 | 44738888 | SUPT3H | ENSG00000196284.9 | 4.286E-7 | 0 | 606802 | gtex_brain_ba24 |
| rs62437972 | 6 | 44739038 | SUPT3H | ENSG00000196284.9 | 1.22E-6 | 0 | 606652 | gtex_brain_ba24 |
| rs12197593 | 6 | 44740895 | SUPT3H | ENSG00000196284.9 | 1.27E-6 | 0 | 604795 | gtex_brain_ba24 |
| rs17336368 | 6 | 44751668 | SUPT3H | ENSG00000196284.9 | 1.611E-7 | 0 | 594022 | gtex_brain_ba24 |
| rs12208621 | 6 | 44752003 | SUPT3H | ENSG00000196284.9 | 4.286E-7 | 0 | 593687 | gtex_brain_ba24 |
| rs140904871 | 6 | 44754956 | SUPT3H | ENSG00000196284.9 | 1.962E-7 | 0 | 590734 | gtex_brain_ba24 |
| rs12215095 | 6 | 44756910 | SUPT3H | ENSG00000196284.9 | 2.597E-6 | 0 | 588780 | gtex_brain_ba24 |
| rs10948171 | 6 | 44761028 | SUPT3H | ENSG00000196284.9 | 1.983E-7 | 0 | 584662 | gtex_brain_ba24 |
| rs62437973 | 6 | 44761978 | SUPT3H | ENSG00000196284.9 | 1.98E-7 | 0 | 583712 | gtex_brain_ba24 |
| rs143714031 | 6 | 44764906 | SUPT3H | ENSG00000196284.9 | 2.641E-6 | 0 | 580784 | gtex_brain_ba24 |
| rs113317263 | 6 | 44767488 | SUPT3H | ENSG00000196284.9 | 7.087E-7 | 0 | 578202 | gtex_brain_ba24 |
| rs12200892 | 6 | 44768925 | SUPT3H | ENSG00000196284.9 | 2.077E-7 | 0 | 576765 | gtex_brain_ba24 |
| rs35958359 | 6 | 44769868 | SUPT3H | ENSG00000196284.9 | 1.956E-7 | 0 | 575822 | gtex_brain_ba24 |
| rs9472365 | 6 | 44770214 | SUPT3H | ENSG00000196284.9 | 2.555E-6 | 0 | 575476 | gtex_brain_ba24 |
| rs9463042 | 6 | 44770527 | SUPT3H | ENSG00000196284.9 | 2.555E-6 | 0 | 575163 | gtex_brain_ba24 |
| rs9463043 | 6 | 44771114 | SUPT3H | ENSG00000196284.9 | 2.555E-6 | 0 | 574576 | gtex_brain_ba24 |
| rs12198016 | 6 | 44771708 | SUPT3H | ENSG00000196284.9 | 1.956E-7 | 0 | 573982 | gtex_brain_ba24 |
| rs9472367 | 6 | 44774597 | SUPT3H | ENSG00000196284.9 | 1.019E-8 | 0 | 571093 | gtex_brain_ba24 |
| rs4644056 | 6 | 44776136 | SUPT3H | ENSG00000196284.9 | 1.956E-7 | 0 | 569554 | gtex_brain_ba24 |
| rs7765371 | 6 | 44777204 | SUPT3H | ENSG00000196284.9 | 6.721E-7 | 0 | 568486 | gtex_brain_ba24 |
| rs10948172 | 6 | 44777691 | SUPT3H | ENSG00000196284.9 | 2.555E-6 | 0 | 567999 | gtex_brain_ba24 |
| rs12210217 | 6 | 44779599 | SUPT3H | ENSG00000196284.9 | 3.675E-7 | 0 | 566091 | gtex_brain_ba24 |
| rs7349931 | 6 | 44783674 | SUPT3H | ENSG00000196284.9 | 1.305E-6 | 0 | 562016 | gtex_brain_ba24 |
| rs56377407 | 6 | 44784298 | SUPT3H | ENSG00000196284.9 | 1.499E-6 | 0 | 561392 | gtex_brain_ba24 |
| rs12215971 | 6 | 44784566 | SUPT3H | ENSG00000196284.9 | 1.305E-6 | 0 | 561124 | gtex_brain_ba24 |
| rs12202698 | 6 | 44784724 | SUPT3H | ENSG00000196284.9 | 2.884E-7 | 0 | 560966 | gtex_brain_ba24 |
| rs12209944 | 6 | 44788156 | SUPT3H | ENSG00000196284.9 | 1.305E-6 | 0 | 557534 | gtex_brain_ba24 |
| rs756 | 6 | 44795772 | SUPT3H | ENSG00000196284.9 | 8.482E-8 | 0 | 549918 | gtex_brain_ba24 |
| rs755 | 6 | 44795790 | SUPT3H | ENSG00000196284.9 | 2.884E-7 | 0 | 549900 | gtex_brain_ba24 |
| rs12195339 | 6 | 44796179 | SUPT3H | ENSG00000196284.9 | 2.782E-9 | 0 | 549511 | gtex_brain_ba24 |
| rs529125 | 6 | 44797088 | SUPT3H | ENSG00000196284.9 | 7.91E-8 | 0 | 548602 | gtex_brain_ba24 |
| rs857601 | 6 | 44805214 | SUPT3H | ENSG00000196284.9 | 7.91E-8 | 0 | 540476 | gtex_brain_ba24 |
| rs860741 | 6 | 44808435 | SUPT3H | ENSG00000196284.9 | 1.556E-6 | 0 | 537255 | gtex_brain_ba24 |
| rs12202704 | 6 | 44819614 | SUPT3H | ENSG00000196284.9 | 8.473E-8 | 0 | 526076 | gtex_brain_ba24 |
| rs10484625 | 6 | 44823449 | SUPT3H | ENSG00000196284.9 | 8.472E-8 | 0 | 522241 | gtex_brain_ba24 |
| rs12215263 | 6 | 44831364 | SUPT3H | ENSG00000196284.9 | 8.493E-8 | 0 | 514326 | gtex_brain_ba24 |
| rs10948176 | 6 | 44833913 | SUPT3H | ENSG00000196284.9 | 8.493E-8 | 0 | 511777 | gtex_brain_ba24 |
| rs12211922 | 6 | 44847210 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 498480 | gtex_brain_ba24 |
| rs12202609 | 6 | 44849693 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 495997 | gtex_brain_ba24 |
| rs62438018 | 6 | 44861325 | SUPT3H | ENSG00000196284.9 | 8.998E-8 | 0 | 484365 | gtex_brain_ba24 |
| rs9367210 | 6 | 44863395 | SUPT3H | ENSG00000196284.9 | 8.505E-8 | 0 | 482295 | gtex_brain_ba24 |
| rs3997499 | 6 | 44864552 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 481138 | gtex_brain_ba24 |
| rs62436368 | 6 | 44867225 | SUPT3H | ENSG00000196284.9 | 6.575E-8 | 0 | 478465 | gtex_brain_ba24 |
| rs62436369 | 6 | 44867539 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 478151 | gtex_brain_ba24 |
| rs149212869 | 6 | 44868469 | SUPT3H | ENSG00000196284.9 | 9.042E-8 | 0 | 477221 | gtex_brain_ba24 |
| rs202039642 | 6 | 44868887 | SUPT3H | ENSG00000196284.9 | 1.462E-9 | 0 | 476803 | gtex_brain_ba24 |
| rs149052880 | 6 | 44871406 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 474284 | gtex_brain_ba24 |
| rs62436374 | 6 | 44874785 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 470905 | gtex_brain_ba24 |
| rs138527602 | 6 | 44875577 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 470113 | gtex_brain_ba24 |
| rs62436375 | 6 | 44875818 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 469872 | gtex_brain_ba24 |
| rs72865923 | 6 | 44878942 | SUPT3H | ENSG00000196284.9 | 9.077E-8 | 0 | 466748 | gtex_brain_ba24 |
| rs72865924 | 6 | 44878943 | SUPT3H | ENSG00000196284.9 | 9.077E-8 | 0 | 466747 | gtex_brain_ba24 |
| rs10484626 | 6 | 44882271 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 463419 | gtex_brain_ba24 |
| rs62436376 | 6 | 44885817 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 459873 | gtex_brain_ba24 |
| rs371781509 | 6 | 44889892 | SUPT3H | ENSG00000196284.9 | 1.877E-7 | 0 | 455798 | gtex_brain_ba24 |
| rs10456120 | 6 | 44900107 | SUPT3H | ENSG00000196284.9 | 8.518E-8 | 0 | 445583 | gtex_brain_ba24 |
| rs12208332 | 6 | 44903221 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 442469 | gtex_brain_ba24 |
| rs12190313 | 6 | 44903902 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 441788 | gtex_brain_ba24 |
| rs12214435 | 6 | 44906717 | SUPT3H | ENSG00000196284.9 | 8.46E-8 | 0 | 438973 | gtex_brain_ba24 |
| rs12198308 | 6 | 44911886 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 433804 | gtex_brain_ba24 |
| rs199693522 | 6 | 44912528 | SUPT3H | ENSG00000196284.9 | 6.885E-8 | 0 | 433162 | gtex_brain_ba24 |
| rs55864280 | 6 | 44917107 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 428583 | gtex_brain_ba24 |
| rs12210292 | 6 | 44925293 | SUPT3H | ENSG00000196284.9 | 2.498E-9 | 0 | 420397 | gtex_brain_ba24 |
| rs12212190 | 6 | 44926271 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 419419 | gtex_brain_ba24 |
| rs12191977 | 6 | 44926810 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 418880 | gtex_brain_ba24 |
| rs12193264 | 6 | 44930793 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 414897 | gtex_brain_ba24 |
| rs12214794 | 6 | 44931465 | SUPT3H | ENSG00000196284.9 | 8.469E-8 | 0 | 414225 | gtex_brain_ba24 |
| rs62436395 | 6 | 44939743 | SUPT3H | ENSG00000196284.9 | 4.987E-7 | 0 | 405947 | gtex_brain_ba24 |
| rs62436396 | 6 | 44939831 | SUPT3H | ENSG00000196284.9 | 3.735E-7 | 0 | 405859 | gtex_brain_ba24 |
| rs62436411 | 6 | 44940706 | SUPT3H | ENSG00000196284.9 | 8.499E-8 | 0 | 404984 | gtex_brain_ba24 |
| rs17423748 | 6 | 44943982 | SUPT3H | ENSG00000196284.9 | 8.53E-8 | 0 | 401708 | gtex_brain_ba24 |
| rs138967479 | 6 | 44957920 | SUPT3H | ENSG00000196284.9 | 2.153E-7 | 0 | 387770 | gtex_brain_ba24 |
| rs10948196 | 6 | 44959384 | SUPT3H | ENSG00000196284.9 | 7.908E-7 | 0 | 386306 | gtex_brain_ba24 |
| rs12194924 | 6 | 44961513 | SUPT3H | ENSG00000196284.9 | 1.55E-7 | 0 | 384177 | gtex_brain_ba24 |
| rs1329711 | 6 | 44963401 | SUPT3H | ENSG00000196284.9 | 7.673E-8 | 0 | 382289 | gtex_brain_ba24 |
| rs12208605 | 6 | 44963735 | SUPT3H | ENSG00000196284.9 | 4.425E-7 | 0 | 381955 | gtex_brain_ba24 |
| rs1329709 | 6 | 44974956 | SUPT3H | ENSG00000196284.9 | 2.471E-7 | 0 | 370734 | gtex_brain_ba24 |
| rs72867436 | 6 | 44975488 | SUPT3H | ENSG00000196284.9 | 2.685E-7 | 0 | 370202 | gtex_brain_ba24 |
| rs12196188 | 6 | 44976426 | SUPT3H | ENSG00000196284.9 | 2.544E-7 | 0 | 369264 | gtex_brain_ba24 |
| rs62436436 | 6 | 44984508 | SUPT3H | ENSG00000196284.9 | 9.962E-8 | 0 | 361182 | gtex_brain_ba24 |
| rs148460475 | 6 | 44986409 | SUPT3H | ENSG00000196284.9 | 1.205E-8 | 0 | 359281 | gtex_brain_ba24 |
| rs11967224 | 6 | 44987009 | SUPT3H | ENSG00000196284.9 | 9.105E-8 | 0 | 358681 | gtex_brain_ba24 |
| rs6908606 | 6 | 44998888 | SUPT3H | ENSG00000196284.9 | 8.053E-8 | 0 | 346802 | gtex_brain_ba24 |
| rs6909047 | 6 | 44998915 | SUPT3H | ENSG00000196284.9 | 8.05E-8 | 0 | 346775 | gtex_brain_ba24 |
| rs6924185 | 6 | 45017228 | SUPT3H | ENSG00000196284.9 | 1.122E-6 | 0 | 328462 | gtex_brain_ba24 |
| rs2396379 | 6 | 45027356 | SUPT3H | ENSG00000196284.9 | 1.126E-6 | 0 | 318334 | gtex_brain_ba24 |
| rs11961316 | 6 | 45029598 | SUPT3H | ENSG00000196284.9 | 1.463E-7 | 0 | 316092 | gtex_brain_ba24 |
| rs11970412 | 6 | 45037516 | SUPT3H | ENSG00000196284.9 | 1.176E-6 | 0 | 308174 | gtex_brain_ba24 |
| rs56337964 | 6 | 45039786 | SUPT3H | ENSG00000196284.9 | 1.178E-6 | 0 | 305904 | gtex_brain_ba24 |
| rs62438863 | 6 | 45040592 | SUPT3H | ENSG00000196284.9 | 1.179E-6 | 0 | 305098 | gtex_brain_ba24 |
| rs62438864 | 6 | 45041787 | SUPT3H | ENSG00000196284.9 | 1.18E-6 | 0 | 303903 | gtex_brain_ba24 |
| rs62438867 | 6 | 45049787 | SUPT3H | ENSG00000196284.9 | 1.157E-6 | 0 | 295903 | gtex_brain_ba24 |
| rs12191521 | 6 | 45051198 | SUPT3H | ENSG00000196284.9 | 1.412E-7 | 0 | 294492 | gtex_brain_ba24 |
| rs12208523 | 6 | 45058828 | SUPT3H | ENSG00000196284.9 | 1.646E-7 | 0 | 286862 | gtex_brain_ba24 |
| rs72869118 | 6 | 45064626 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 281064 | gtex_brain_ba24 |
| rs72869127 | 6 | 45071712 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 273978 | gtex_brain_ba24 |
| rs71864894 | 6 | 45075696 | SUPT3H | ENSG00000196284.9 | 1.163E-6 | 0 | 269994 | gtex_brain_ba24 |
| rs2038765 | 6 | 45076494 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 269196 | gtex_brain_ba24 |
| rs12198982 | 6 | 45077914 | SUPT3H | ENSG00000196284.9 | 1.417E-7 | 0 | 267776 | gtex_brain_ba24 |
| rs10456121 | 6 | 45092545 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 253145 | gtex_brain_ba24 |
| rs10948201 | 6 | 45093494 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 252196 | gtex_brain_ba24 |
| rs56283067 | 6 | 45100330 | SUPT3H | ENSG00000196284.9 | 1.152E-6 | 0 | 245360 | gtex_brain_ba24 |
| rs56412464 | 6 | 45102376 | SUPT3H | ENSG00000196284.9 | 1.18E-6 | 0 | 243314 | gtex_brain_ba24 |
| rs12193720 | 6 | 45103362 | SUPT3H | ENSG00000196284.9 | 1.254E-6 | 0 | 242328 | gtex_brain_ba24 |
| rs12209161 | 6 | 45104321 | SUPT3H | ENSG00000196284.9 | 1.269E-6 | 0 | 241369 | gtex_brain_ba24 |
| rs10456542 | 6 | 45107579 | SUPT3H | ENSG00000196284.9 | 1.305E-6 | 0 | 238111 | gtex_brain_ba24 |
| rs114017772 | 6 | 45113862 | SUPT3H | ENSG00000196284.9 | 1.155E-6 | 0 | 231828 | gtex_brain_ba24 |
| rs1324536 | 6 | 45116261 | SUPT3H | ENSG00000196284.9 | 1.158E-6 | 0 | 229429 | gtex_brain_ba24 |
| rs62436778 | 6 | 45120666 | SUPT3H | ENSG00000196284.9 | 1.482E-6 | 0 | 225024 | gtex_brain_ba24 |
| rs62436779 | 6 | 45124911 | SUPT3H | ENSG00000196284.9 | 1.741E-6 | 0 | 220779 | gtex_brain_ba24 |
| rs10948206 | 6 | 45126012 | SUPT3H | ENSG00000196284.9 | 1.67E-6 | 0 | 219678 | gtex_brain_ba24 |
| rs62436780 | 6 | 45128261 | SUPT3H | ENSG00000196284.9 | 2.103E-6 | 0 | 217429 | gtex_brain_ba24 |
| rs11967630 | 6 | 45128524 | SUPT3H | ENSG00000196284.9 | 2.103E-6 | 0 | 217166 | gtex_brain_ba24 |
| rs12193682 | 6 | 45140519 | SUPT3H | ENSG00000196284.9 | 1.232E-6 | 0 | 205171 | gtex_brain_ba24 |
| rs12193812 | 6 | 45140761 | SUPT3H | ENSG00000196284.9 | 1.229E-6 | 0 | 204929 | gtex_brain_ba24 |
| rs11965706 | 6 | 45141441 | SUPT3H | ENSG00000196284.9 | 1.198E-6 | 0 | 204249 | gtex_brain_ba24 |
| rs62436781 | 6 | 45142068 | SUPT3H | ENSG00000196284.9 | 1.506E-7 | 0 | 203622 | gtex_brain_ba24 |
| rs17209636 | 6 | 45142517 | SUPT3H | ENSG00000196284.9 | 1.191E-6 | 0 | 203173 | gtex_brain_ba24 |
| rs190280859 | 6 | 45146792 | SUPT3H | ENSG00000196284.9 | 1.971E-6 | 0 | 198898 | gtex_brain_ba24 |
| rs12206568 | 6 | 45152747 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 192943 | gtex_brain_ba24 |
| rs10948211 | 6 | 45156767 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 188923 | gtex_brain_ba24 |
| rs10948212 | 6 | 45156933 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 188757 | gtex_brain_ba24 |
| rs12205860 | 6 | 45157323 | SUPT3H | ENSG00000196284.9 | 1.124E-6 | 0 | 188367 | gtex_brain_ba24 |
| rs10948213 | 6 | 45158515 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 187175 | gtex_brain_ba24 |
| rs6919813 | 6 | 45159177 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 186513 | gtex_brain_ba24 |
| rs6919998 | 6 | 45159289 | SUPT3H | ENSG00000196284.9 | 1.169E-6 | 0 | 186401 | gtex_brain_ba24 |
| rs6920046 | 6 | 45159431 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 186259 | gtex_brain_ba24 |
| rs12191566 | 6 | 45160002 | SUPT3H | ENSG00000196284.9 | 1.169E-6 | 0 | 185688 | gtex_brain_ba24 |
| rs12211519 | 6 | 45160530 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 185160 | gtex_brain_ba24 |
| rs10456122 | 6 | 45163057 | SUPT3H | ENSG00000196284.9 | 1.169E-6 | 0 | 182633 | gtex_brain_ba24 |
| rs17209678 | 6 | 45163601 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 182089 | gtex_brain_ba24 |
| rs2093900 | 6 | 45176683 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 169007 | gtex_brain_ba24 |
| rs12205905 | 6 | 45178498 | SUPT3H | ENSG00000196284.9 | 1.202E-6 | 0 | 167192 | gtex_brain_ba24 |
| rs10456543 | 6 | 45178907 | SUPT3H | ENSG00000196284.9 | 1.188E-6 | 0 | 166783 | gtex_brain_ba24 |
| rs62400267 | 6 | 45180440 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 165250 | gtex_brain_ba24 |
| rs12192890 | 6 | 45182434 | SUPT3H | ENSG00000196284.9 | 1.194E-6 | 0 | 163256 | gtex_brain_ba24 |
| rs12206561 | 6 | 45182809 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 162881 | gtex_brain_ba24 |
| rs62400268 | 6 | 45183011 | SUPT3H | ENSG00000196284.9 | 1.194E-6 | 0 | 162679 | gtex_brain_ba24 |
| rs17288250 | 6 | 45192022 | SUPT3H | ENSG00000196284.9 | 1.785E-6 | 0 | 153668 | gtex_brain_ba24 |
| rs17288257 | 6 | 45193076 | SUPT3H | ENSG00000196284.9 | 1.779E-6 | 0 | 152614 | gtex_brain_ba24 |
| rs12209175 | 6 | 45194643 | SUPT3H | ENSG00000196284.9 | 1.224E-6 | 0 | 151047 | gtex_brain_ba24 |
| rs12214885 | 6 | 45197731 | SUPT3H | ENSG00000196284.9 | 1.163E-6 | 0 | 147959 | gtex_brain_ba24 |
| rs72857080 | 6 | 45198373 | SUPT3H | ENSG00000196284.9 | 1.163E-6 | 0 | 147317 | gtex_brain_ba24 |
| rs62400269 | 6 | 45200634 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 145056 | gtex_brain_ba24 |
| rs56397204 | 6 | 45203554 | SUPT3H | ENSG00000196284.9 | 1.868E-6 | 0 | 142136 | gtex_brain_ba24 |
| rs56357385 | 6 | 45203591 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 142099 | gtex_brain_ba24 |
| rs62400289 | 6 | 45203783 | SUPT3H | ENSG00000196284.9 | 1.162E-6 | 0 | 141907 | gtex_brain_ba24 |
| rs12196217 | 6 | 45204921 | SUPT3H | ENSG00000196284.9 | 1.162E-6 | 0 | 140769 | gtex_brain_ba24 |
| rs6927213 | 6 | 45206283 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 139407 | gtex_brain_ba24 |
| rs1853651 | 6 | 45207325 | SUPT3H | ENSG00000196284.9 | 1.16E-6 | 0 | 138365 | gtex_brain_ba24 |
| rs12202232 | 6 | 45208345 | SUPT3H | ENSG00000196284.9 | 1.16E-6 | 0 | 137345 | gtex_brain_ba24 |
| rs12202434 | 6 | 45208854 | SUPT3H | ENSG00000196284.9 | 1.16E-6 | 0 | 136836 | gtex_brain_ba24 |
| rs12190367 | 6 | 45208938 | SUPT3H | ENSG00000196284.9 | 1.13E-6 | 0 | 136752 | gtex_brain_ba24 |
| rs77103205 | 6 | 45208956 | SUPT3H | ENSG00000196284.9 | 1.13E-6 | 0 | 136734 | gtex_brain_ba24 |
| rs62400290 | 6 | 45209788 | SUPT3H | ENSG00000196284.9 | 1.16E-6 | 0 | 135902 | gtex_brain_ba24 |
| rs75688897 | 6 | 45211230 | SUPT3H | ENSG00000196284.9 | 1.278E-6 | 0 | 134460 | gtex_brain_ba24 |
| rs12205379 | 6 | 45215074 | SUPT3H | ENSG00000196284.9 | 1.25E-6 | 0 | 130616 | gtex_brain_ba24 |
| rs59654941 | 6 | 45215962 | SUPT3H | ENSG00000196284.9 | 8.137E-7 | 0 | 129728 | gtex_brain_ba24 |
| rs10456546 | 6 | 45217424 | SUPT3H | ENSG00000196284.9 | 1.25E-6 | 0 | 128266 | gtex_brain_ba24 |
| rs202091312 | 6 | 45218107 | SUPT3H | ENSG00000196284.9 | 2.447E-6 | 0 | 127583 | gtex_brain_ba24 |
| rs369807773 | 6 | 45218108 | SUPT3H | ENSG00000196284.9 | 2.382E-6 | 0 | 127582 | gtex_brain_ba24 |
| rs10456547 | 6 | 45219526 | SUPT3H | ENSG00000196284.9 | 8.318E-7 | 0 | 126164 | gtex_brain_ba24 |
| rs10456548 | 6 | 45219699 | SUPT3H | ENSG00000196284.9 | 1.25E-6 | 0 | 125991 | gtex_brain_ba24 |
| rs72858517 | 6 | 45223467 | SUPT3H | ENSG00000196284.9 | 1.244E-6 | 0 | 122223 | gtex_brain_ba24 |
| rs10456549 | 6 | 45225761 | SUPT3H | ENSG00000196284.9 | 1.244E-6 | 0 | 119929 | gtex_brain_ba24 |
| rs12191262 | 6 | 45227016 | SUPT3H | ENSG00000196284.9 | 1.228E-6 | 0 | 118674 | gtex_brain_ba24 |
| rs5875914 | 6 | 45227358 | SUPT3H | ENSG00000196284.9 | 1.531E-7 | 0 | 118332 | gtex_brain_ba24 |
| rs10948219 | 6 | 45229307 | SUPT3H | ENSG00000196284.9 | 1.262E-6 | 0 | 116383 | gtex_brain_ba24 |
| rs28583363 | 6 | 45231336 | SUPT3H | ENSG00000196284.9 | 1.262E-6 | 0 | 114354 | gtex_brain_ba24 |
| rs62400293 | 6 | 45233580 | SUPT3H | ENSG00000196284.9 | 1.264E-6 | 0 | 112110 | gtex_brain_ba24 |
| rs59847907 | 6 | 45235568 | SUPT3H | ENSG00000196284.9 | 9.385E-7 | 0 | 110122 | gtex_brain_ba24 |
| rs4443508 | 6 | 45235952 | SUPT3H | ENSG00000196284.9 | 1.156E-6 | 0 | 109738 | gtex_brain_ba24 |
| rs10948220 | 6 | 45236654 | SUPT3H | ENSG00000196284.9 | 1.156E-6 | 0 | 109036 | gtex_brain_ba24 |
| rs10948221 | 6 | 45236707 | SUPT3H | ENSG00000196284.9 | 1.156E-6 | 0 | 108983 | gtex_brain_ba24 |
| rs4400216 | 6 | 45237955 | SUPT3H | ENSG00000196284.9 | 1.27E-6 | 0 | 107735 | gtex_brain_ba24 |
| rs4267941 | 6 | 45241302 | SUPT3H | ENSG00000196284.9 | 1.277E-6 | 0 | 104388 | gtex_brain_ba24 |
| rs12203558 | 6 | 45244423 | SUPT3H | ENSG00000196284.9 | 1.281E-6 | 0 | 101267 | gtex_brain_ba24 |
| rs4479922 | 6 | 45248371 | SUPT3H | ENSG00000196284.9 | 1.158E-6 | 0 | 97319 | gtex_brain_ba24 |
| rs143106554 | 6 | 45252733 | SUPT3H | ENSG00000196284.9 | 1.277E-6 | 0 | 92957 | gtex_brain_ba24 |
| rs151210095 | 6 | 45253084 | SUPT3H | ENSG00000196284.9 | 1.138E-6 | 0 | 92606 | gtex_brain_ba24 |
| rs143086013 | 6 | 45253349 | SUPT3H | ENSG00000196284.9 | 1.959E-6 | 0 | 92341 | gtex_brain_ba24 |
| rs12153922 | 6 | 45256159 | SUPT3H | ENSG00000196284.9 | 9.88E-7 | 0 | 89531 | gtex_brain_ba24 |
| rs62400313 | 6 | 45256366 | SUPT3H | ENSG00000196284.9 | 4.54E-7 | 0 | 89324 | gtex_brain_ba24 |
| rs11964690 | 6 | 45258068 | SUPT3H | ENSG00000196284.9 | 1.155E-6 | 0 | 87622 | gtex_brain_ba24 |
| rs11964844 | 6 | 45258823 | SUPT3H | ENSG00000196284.9 | 1.296E-6 | 0 | 86867 | gtex_brain_ba24 |
| rs55964727 | 6 | 45259079 | SUPT3H | ENSG00000196284.9 | 1.293E-6 | 0 | 86611 | gtex_brain_ba24 |
| rs11965520 | 6 | 45259431 | SUPT3H | ENSG00000196284.9 | 1.151E-6 | 0 | 86259 | gtex_brain_ba24 |
| rs72860105 | 6 | 45265201 | SUPT3H | ENSG00000196284.9 | 1.154E-6 | 0 | 80489 | gtex_brain_ba24 |
| rs55779653 | 6 | 45265960 | SUPT3H | ENSG00000196284.9 | 1.154E-6 | 0 | 79730 | gtex_brain_ba24 |
| rs4498350 | 6 | 45268438 | SUPT3H | ENSG00000196284.9 | 1.153E-6 | 0 | 77252 | gtex_brain_ba24 |
| rs4544895 | 6 | 45271917 | SUPT3H | ENSG00000196284.9 | 1.152E-6 | 0 | 73773 | gtex_brain_ba24 |
| rs10948223 | 6 | 45273921 | SUPT3H | ENSG00000196284.9 | 1.152E-6 | 0 | 71769 | gtex_brain_ba24 |
| rs4478406 | 6 | 45274473 | SUPT3H | ENSG00000196284.9 | 1.139E-6 | 0 | 71217 | gtex_brain_ba24 |
| rs4288203 | 6 | 45274490 | SUPT3H | ENSG00000196284.9 | 1.134E-6 | 0 | 71200 | gtex_brain_ba24 |
| rs12199507 | 6 | 45279540 | SUPT3H | ENSG00000196284.9 | 1.149E-6 | 0 | 66150 | gtex_brain_ba24 |
| rs7449537 | 6 | 45281232 | SUPT3H | ENSG00000196284.9 | 1.149E-6 | 0 | 64458 | gtex_brain_ba24 |
| rs12191751 | 6 | 45282111 | SUPT3H | ENSG00000196284.9 | 1.15E-6 | 0 | 63579 | gtex_brain_ba24 |
| rs62400317 | 6 | 45284923 | SUPT3H | ENSG00000196284.9 | 1.151E-6 | 0 | 60767 | gtex_brain_ba24 |
| rs62400326 | 6 | 45287465 | SUPT3H | ENSG00000196284.9 | 1.15E-6 | 0 | 58225 | gtex_brain_ba24 |
| rs17209741 | 6 | 45292438 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 53252 | gtex_brain_ba24 |
| rs12201555 | 6 | 45294400 | SUPT3H | ENSG00000196284.9 | 1.148E-6 | 0 | 51290 | gtex_brain_ba24 |
| rs12205523 | 6 | 45296618 | SUPT3H | ENSG00000196284.9 | 1.148E-6 | 0 | 49072 | gtex_brain_ba24 |
| rs12201899 | 6 | 45298204 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 47486 | gtex_brain_ba24 |
| rs58769170 | 6 | 45298531 | SUPT3H | ENSG00000196284.9 | 1.148E-6 | 0 | 47159 | gtex_brain_ba24 |
| rs10948226 | 6 | 45299174 | SUPT3H | ENSG00000196284.9 | 1.15E-6 | 0 | 46516 | gtex_brain_ba24 |
| rs12199256 | 6 | 45303493 | SUPT3H | ENSG00000196284.9 | 1.152E-6 | 0 | 42197 | gtex_brain_ba24 |
| rs11963924 | 6 | 45306562 | SUPT3H | ENSG00000196284.9 | 1.154E-6 | 0 | 39128 | gtex_brain_ba24 |
| rs12214749 | 6 | 45307906 | SUPT3H | ENSG00000196284.9 | 1.142E-6 | 0 | 37784 | gtex_brain_ba24 |
| rs12205468 | 6 | 45310285 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 35405 | gtex_brain_ba24 |
| rs71713889 | 6 | 45313909 | SUPT3H | ENSG00000196284.9 | 1.145E-6 | 0 | 31781 | gtex_brain_ba24 |
| rs12194682 | 6 | 45320520 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 25170 | gtex_brain_ba24 |
| rs17209769 | 6 | 45321205 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 24485 | gtex_brain_ba24 |
| rs62400330 | 6 | 45321455 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 24235 | gtex_brain_ba24 |
| rs12211923 | 6 | 45324344 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 21346 | gtex_brain_ba24 |
| rs12213644 | 6 | 45324893 | SUPT3H | ENSG00000196284.9 | 1.14E-6 | 0 | 20797 | gtex_brain_ba24 |
| rs56203924 | 6 | 45325186 | SUPT3H | ENSG00000196284.9 | 9.816E-7 | 0 | 20504 | gtex_brain_ba24 |
| rs11966878 | 6 | 45328265 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 17425 | gtex_brain_ba24 |
| rs12194628 | 6 | 45329376 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 16314 | gtex_brain_ba24 |
| rs12203466 | 6 | 45330263 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 15427 | gtex_brain_ba24 |
| rs10807321 | 6 | 45330974 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 14716 | gtex_brain_ba24 |
| rs12205642 | 6 | 45331765 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 13925 | gtex_brain_ba24 |
| rs112396437 | 6 | 45334107 | SUPT3H | ENSG00000196284.9 | 1.144E-6 | 0 | 11583 | gtex_brain_ba24 |
| rs17288320 | 6 | 45338703 | SUPT3H | ENSG00000196284.9 | 1.426E-7 | 0 | 6987 | gtex_brain_ba24 |
| rs12216308 | 6 | 45342305 | SUPT3H | ENSG00000196284.9 | 1.129E-6 | 0 | 3385 | gtex_brain_ba24 |
| rs55895465 | 6 | 45344837 | SUPT3H | ENSG00000196284.9 | 1.126E-6 | 0 | 853 | gtex_brain_ba24 |
| rs12210230 | 6 | 45344854 | SUPT3H | ENSG00000196284.9 | 1.126E-6 | 0 | 836 | gtex_brain_ba24 |
| rs62400335 | 6 | 45347782 | SUPT3H | ENSG00000196284.9 | 1.14E-6 | 0 | -2092 | gtex_brain_ba24 |
| rs11968637 | 6 | 45348633 | SUPT3H | ENSG00000196284.9 | 1.149E-6 | 0 | -2943 | gtex_brain_ba24 |
| rs17288327 | 6 | 45349877 | SUPT3H | ENSG00000196284.9 | 1.16E-6 | 0 | -4187 | gtex_brain_ba24 |
| rs201842444 | 6 | 45357979 | SUPT3H | ENSG00000196284.9 | 2.287E-6 | 0 | -12289 | gtex_brain_ba24 |
| rs147810129 | 6 | 45357980 | SUPT3H | ENSG00000196284.9 | 2.287E-6 | 0 | -12290 | gtex_brain_ba24 |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| FCN1 | 0.60 | 0.48 |
| S100A12 | 0.60 | 0.51 |
| S100A9 | 0.59 | 0.60 |
| NKG7 | 0.59 | 0.57 |
| S100A8 | 0.57 | 0.57 |
| CD48 | 0.55 | 0.52 |
| IGHV3-6 | 0.53 | 0.56 |
| IFITM2 | 0.53 | 0.59 |
| C16orf14 | 0.51 | 0.47 |
| LTB | 0.51 | 0.51 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| STX6 | -0.46 | -0.56 |
| GRLF1 | -0.46 | -0.52 |
| HERC1 | -0.46 | -0.54 |
| JAKMIP2 | -0.45 | -0.55 |
| HNRNPUL2 | -0.45 | -0.48 |
| MYO18A | -0.45 | -0.49 |
| CLIP1 | -0.44 | -0.50 |
| TP53BP1 | -0.44 | -0.55 |
| ERCC6 | -0.44 | -0.47 |
| C14orf102 | -0.44 | -0.48 |
Section III. Gene Ontology annotation
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|---|---|---|---|
| GO:0003677 | DNA binding | IEA | - | |
| GO:0003702 | RNA polymerase II transcription factor activity | IEA | - | |
| GO:0003702 | RNA polymerase II transcription factor activity | TAS | 9787080 | |
| GO:0016986 | transcription initiation factor activity | NAS | - | |
| GO:0016563 | transcription activator activity | NAS | 9787080 | |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0006357 | regulation of transcription from RNA polymerase II promoter | TAS | 9787080 | |
| GO:0006350 | transcription | IEA | - | |
| GO:0006366 | transcription from RNA polymerase II promoter | IEA | - | |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0005634 | nucleus | IDA | 9726987 | |
| GO:0005667 | transcription factor complex | IEA | - |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| PID MYC ACTIV PATHWAY | 79 | 62 | All SZGR 2.0 genes in this pathway |
| PID MYC PATHWAY | 25 | 22 | All SZGR 2.0 genes in this pathway |
| ZHONG RESPONSE TO AZACITIDINE AND TSA DN | 70 | 38 | All SZGR 2.0 genes in this pathway |
| DAVICIONI TARGETS OF PAX FOXO1 FUSIONS UP | 255 | 177 | All SZGR 2.0 genes in this pathway |
| NAGY TFTC COMPONENTS HUMAN | 19 | 11 | All SZGR 2.0 genes in this pathway |
| NAGY STAGA COMPONENTS HUMAN | 15 | 8 | All SZGR 2.0 genes in this pathway |
| NAGY PCAF COMPONENTS HUMAN | 9 | 7 | All SZGR 2.0 genes in this pathway |
| NUYTTEN NIPP1 TARGETS UP | 769 | 437 | All SZGR 2.0 genes in this pathway |
| MASSARWEH TAMOXIFEN RESISTANCE DN | 258 | 160 | All SZGR 2.0 genes in this pathway |
| MUELLER PLURINET | 299 | 189 | All SZGR 2.0 genes in this pathway |
| BEIER GLIOMA STEM CELL DN | 66 | 42 | All SZGR 2.0 genes in this pathway |
| CAIRO HEPATOBLASTOMA CLASSES UP | 605 | 377 | All SZGR 2.0 genes in this pathway |
| WAKABAYASHI ADIPOGENESIS PPARG BOUND 8D | 658 | 397 | All SZGR 2.0 genes in this pathway |
| PEDRIOLI MIR31 TARGETS DN | 418 | 245 | All SZGR 2.0 genes in this pathway |
Section VI. microRNA annotation
| miRNA family | Target position | miRNA ID | miRNA seq | ||
|---|---|---|---|---|---|
| UTR start | UTR end | Match method | |||
| miR-30-5p | 177 | 183 | m8 | hsa-miR-30a-5p | UGUAAACAUCCUCGACUGGAAG |
| hsa-miR-30cbrain | UGUAAACAUCCUACACUCUCAGC | ||||
| hsa-miR-30dSZ | UGUAAACAUCCCCGACUGGAAG | ||||
| hsa-miR-30bSZ | UGUAAACAUCCUACACUCAGCU | ||||
| hsa-miR-30e-5p | UGUAAACAUCCUUGACUGGA | ||||
| miR-375 | 905 | 911 | 1A | hsa-miR-375 | UUUGUUCGUUCGGCUCGCGUGA |
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.