Gene Page: TTC14
Summary ?
| GeneID | 151613 |
| Symbol | TTC14 |
| Synonyms | DRDL5813|PRO19630 |
| Description | tetratricopeptide repeat domain 14 |
| Reference | HGNC:HGNC:24697|Ensembl:ENSG00000163728|HPRD:15579|Vega:OTTHUMG00000157859 |
| Gene type | protein-coding |
| Map location | 3q26.33 |
| Pascal p-value | 4.105E-5 |
| Sherlock p-value | 0.575 |
| eGene | Myers' cis & trans |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs16876882 | chr4 | 25130282 | TTC14 | 151613 | 0.09 | trans | ||
| rs1540229 | chr11 | 131045238 | TTC14 | 151613 | 0.1 | trans | ||
| rs2541113 | chr12 | 11834048 | TTC14 | 151613 | 0.13 | trans | ||
| rs6530359 | chrX | 9957034 | TTC14 | 151613 | 0.13 | trans | ||
| rs17145698 | chrX | 40218345 | TTC14 | 151613 | 0.2 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| GRAESSMANN APOPTOSIS BY DOXORUBICIN DN | 1781 | 1082 | All SZGR 2.0 genes in this pathway |
| NUYTTEN NIPP1 TARGETS UP | 769 | 437 | All SZGR 2.0 genes in this pathway |
| STARK PREFRONTAL CORTEX 22Q11 DELETION UP | 195 | 138 | All SZGR 2.0 genes in this pathway |
| YAO HOXA10 TARGETS VIA PROGESTERONE UP | 79 | 58 | All SZGR 2.0 genes in this pathway |
| CUI TCF21 TARGETS 2 DN | 830 | 547 | All SZGR 2.0 genes in this pathway |
| YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 2 | 86 | 50 | All SZGR 2.0 genes in this pathway |
| WHITFIELD CELL CYCLE G1 S | 147 | 76 | All SZGR 2.0 genes in this pathway |