Summary ?
GeneID163227
SymbolZNF100
Synonyms-
Descriptionzinc finger protein 100
ReferenceMIM:603982|HGNC:HGNC:12880|HPRD:10359|
Gene typeprotein-coding
Map location19p12
Pascal p-value0.011
eGeneCaudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Nucleus accumbens basal ganglia
Putamen basal ganglia

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs359282781921873996ZNF100ENSG00000197020.63.962E-9076434gtex_brain_putamen_basal
rs72485531921879244ZNF100ENSG00000197020.69.759E-8071186gtex_brain_putamen_basal
rs110854911921879352ZNF100ENSG00000197020.61.865E-8071078gtex_brain_putamen_basal
rs116713231921879577ZNF100ENSG00000197020.69.873E-8070853gtex_brain_putamen_basal
rs741740331921881365ZNF100ENSG00000197020.61.017E-8069065gtex_brain_putamen_basal
rs120520441921882203ZNF100ENSG00000197020.61.073E-6068227gtex_brain_putamen_basal
rs2016369511921883947ZNF100ENSG00000197020.63.192E-6066483gtex_brain_putamen_basal
rs1999102721921883950ZNF100ENSG00000197020.64.712E-6066480gtex_brain_putamen_basal
rs344263761921884270ZNF100ENSG00000197020.63.179E-6066160gtex_brain_putamen_basal
rs357711011921884320ZNF100ENSG00000197020.63.179E-6066110gtex_brain_putamen_basal
rs350768411921885714ZNF100ENSG00000197020.61.073E-6064716gtex_brain_putamen_basal
rs749234191921887278ZNF100ENSG00000197020.64.712E-6063152gtex_brain_putamen_basal
rs65112861921892040ZNF100ENSG00000197020.63.721E-6058390gtex_brain_putamen_basal
rs104172621921892560ZNF100ENSG00000197020.61.411E-6057870gtex_brain_putamen_basal
rs104693711921893614ZNF100ENSG00000197020.62.048E-6056816gtex_brain_putamen_basal
rs45474651921901056ZNF100ENSG00000197020.62.039E-6049374gtex_brain_putamen_basal
rs2019442531921905565ZNF100ENSG00000197020.61.513E-10044865gtex_brain_putamen_basal
rs72527981921908053ZNF100ENSG00000197020.63.322E-11042377gtex_brain_putamen_basal
rs3744378041921908798ZNF100ENSG00000197020.61.619E-6041632gtex_brain_putamen_basal
rs72464001921909948ZNF100ENSG00000197020.63.562E-11040482gtex_brain_putamen_basal
rs357172931921912755ZNF100ENSG00000197020.63.019E-11037675gtex_brain_putamen_basal
rs81114641921917939ZNF100ENSG00000197020.66.875E-7032491gtex_brain_putamen_basal
rs81136521921921709ZNF100ENSG00000197020.66.296E-9028721gtex_brain_putamen_basal
rs561805991921922289ZNF100ENSG00000197020.64.108E-7028141gtex_brain_putamen_basal
rs43389091921922636ZNF100ENSG00000197020.63.576E-11027794gtex_brain_putamen_basal
rs610374851921924189ZNF100ENSG00000197020.63.124E-10026241gtex_brain_putamen_basal
rs43198781921924452ZNF100ENSG00000197020.69.867E-11025978gtex_brain_putamen_basal
rs46132011921927706ZNF100ENSG00000197020.63.164E-7022724gtex_brain_putamen_basal
rs104211131921929885ZNF100ENSG00000197020.62.715E-7020545gtex_brain_putamen_basal
rs104213421921930003ZNF100ENSG00000197020.62.69E-7020427gtex_brain_putamen_basal
rs48082951921930317ZNF100ENSG00000197020.62.637E-7020113gtex_brain_putamen_basal
rs343355101921930779ZNF100ENSG00000197020.61.176E-9019651gtex_brain_putamen_basal
rs129725931921932574ZNF100ENSG00000197020.65.069E-10017856gtex_brain_putamen_basal
rs104230411921933943ZNF100ENSG00000197020.62.106E-7016487gtex_brain_putamen_basal
rs81023201921936885ZNF100ENSG00000197020.63.013E-11013545gtex_brain_putamen_basal
rs48091751921938744ZNF100ENSG00000197020.62.106E-7011686gtex_brain_putamen_basal
rs72588591921942723ZNF100ENSG00000197020.62.458E-707707gtex_brain_putamen_basal
rs561680291921942877ZNF100ENSG00000197020.61.704E-907553gtex_brain_putamen_basal
rs104050751921943707ZNF100ENSG00000197020.61.748E-706723gtex_brain_putamen_basal
rs104122251921944450ZNF100ENSG00000197020.62.197E-705980gtex_brain_putamen_basal
rs110854921921945186ZNF100ENSG00000197020.62.106E-705244gtex_brain_putamen_basal
rs65112911921950402ZNF100ENSG00000197020.62.95E-11028gtex_brain_putamen_basal
rs43817211921951581ZNF100ENSG00000197020.62.388E-60-1151gtex_brain_putamen_basal
rs45225351921951615ZNF100ENSG00000197020.67.192E-80-1185gtex_brain_putamen_basal
rs48091811921974203ZNF100ENSG00000197020.63.045E-60-23773gtex_brain_putamen_basal
rs9507111921977453ZNF100ENSG00000197020.62.861E-60-27023gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
REACTOME GENERIC TRANSCRIPTION PATHWAY 352181All SZGR 2.0 genes in this pathway
DODD NASOPHARYNGEAL CARCINOMA DN 1375806All SZGR 2.0 genes in this pathway
WEI MYCN TARGETS WITH E BOX 795478All SZGR 2.0 genes in this pathway