Gene Page: APLNR
Summary ?
GeneID | 187 |
Symbol | APLNR |
Synonyms | AGTRL1|APJ|APJR|HG11 |
Description | apelin receptor |
Reference | MIM:600052|HGNC:HGNC:339|Ensembl:ENSG00000134817|HPRD:02503|Vega:OTTHUMG00000167021 |
Gene type | protein-coding |
Map location | 11q12 |
Pascal p-value | 0.013 |
Sherlock p-value | 0.268 |
eGene | Myers' cis & trans Meta |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs12656577 | chr5 | 28079168 | APLNR | 187 | 0.11 | trans | ||
rs4078278 | chr10 | 35107679 | APLNR | 187 | 0.04 | trans | ||
rs9418129 | 0 | APLNR | 187 | 0.18 | trans | |||
rs12254965 | chr10 | 127297037 | APLNR | 187 | 0.08 | trans | ||
rs16979927 | chr20 | 55019249 | APLNR | 187 | 0.09 | trans | ||
rs6632445 | chrX | 35981375 | APLNR | 187 | 0.12 | trans | ||
rs6632450 | chrX | 35993453 | APLNR | 187 | 0.12 | trans | ||
rs6629027 | chrX | 36007613 | APLNR | 187 | 0.12 | trans | ||
rs5973565 | chrX | 36067171 | APLNR | 187 | 0.12 | trans | ||
rs7060495 | chrX | 36100343 | APLNR | 187 | 0.1 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
Top 10 positively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
MT3 | 0.80 | 0.83 |
SCRG1 | 0.78 | 0.81 |
B2M | 0.78 | 0.81 |
PSMB9 | 0.78 | 0.80 |
KLRC3 | 0.77 | 0.80 |
S100A16 | 0.77 | 0.80 |
PSMB8 | 0.76 | 0.79 |
MT1G | 0.76 | 0.80 |
TLCD1 | 0.75 | 0.81 |
MT1E | 0.75 | 0.82 |
Top 10 negatively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
HEATR5B | -0.68 | -0.74 |
CKAP5 | -0.68 | -0.75 |
MCM3AP | -0.68 | -0.74 |
PDXDC1 | -0.67 | -0.71 |
ZRANB1 | -0.67 | -0.72 |
ANKRD17 | -0.67 | -0.71 |
USP34 | -0.66 | -0.73 |
TOPBP1 | -0.66 | -0.73 |
POLR3A | -0.66 | -0.73 |
EIF4ENIF1 | -0.66 | -0.71 |
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
KEGG NEUROACTIVE LIGAND RECEPTOR INTERACTION | 272 | 195 | All SZGR 2.0 genes in this pathway |
REACTOME SIGNALING BY GPCR | 920 | 449 | All SZGR 2.0 genes in this pathway |
REACTOME PEPTIDE LIGAND BINDING RECEPTORS | 188 | 108 | All SZGR 2.0 genes in this pathway |
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS | 305 | 177 | All SZGR 2.0 genes in this pathway |
REACTOME GPCR DOWNSTREAM SIGNALING | 805 | 368 | All SZGR 2.0 genes in this pathway |
REACTOME G ALPHA I SIGNALLING EVENTS | 195 | 114 | All SZGR 2.0 genes in this pathway |
REACTOME GPCR LIGAND BINDING | 408 | 246 | All SZGR 2.0 genes in this pathway |
DELYS THYROID CANCER UP | 443 | 294 | All SZGR 2.0 genes in this pathway |
LINDGREN BLADDER CANCER CLUSTER 1 DN | 378 | 231 | All SZGR 2.0 genes in this pathway |
LINDGREN BLADDER CANCER CLUSTER 2B | 392 | 251 | All SZGR 2.0 genes in this pathway |
SHETH LIVER CANCER VS TXNIP LOSS PAM6 | 46 | 32 | All SZGR 2.0 genes in this pathway |
SAKAI CHRONIC HEPATITIS VS LIVER CANCER DN | 36 | 24 | All SZGR 2.0 genes in this pathway |
FERRANDO T ALL WITH MLL ENL FUSION DN | 87 | 57 | All SZGR 2.0 genes in this pathway |
URS ADIPOCYTE DIFFERENTIATION UP | 74 | 51 | All SZGR 2.0 genes in this pathway |
BLALOCK ALZHEIMERS DISEASE INCIPIENT UP | 390 | 242 | All SZGR 2.0 genes in this pathway |
CHEN LVAD SUPPORT OF FAILING HEART DN | 42 | 32 | All SZGR 2.0 genes in this pathway |
BLALOCK ALZHEIMERS DISEASE UP | 1691 | 1088 | All SZGR 2.0 genes in this pathway |
RAMASWAMY METASTASIS UP | 66 | 43 | All SZGR 2.0 genes in this pathway |
BANDRES RESPONSE TO CARMUSTIN MGMT 48HR DN | 161 | 105 | All SZGR 2.0 genes in this pathway |
MCDOWELL ACUTE LUNG INJURY DN | 48 | 33 | All SZGR 2.0 genes in this pathway |
DAIRKEE CANCER PRONE RESPONSE E2 | 28 | 21 | All SZGR 2.0 genes in this pathway |
ACEVEDO LIVER CANCER DN | 540 | 340 | All SZGR 2.0 genes in this pathway |
SMID BREAST CANCER NORMAL LIKE UP | 476 | 285 | All SZGR 2.0 genes in this pathway |
BOQUEST STEM CELL DN | 216 | 143 | All SZGR 2.0 genes in this pathway |
BOYAULT LIVER CANCER SUBCLASS G3 DN | 51 | 32 | All SZGR 2.0 genes in this pathway |
WANG NFKB TARGETS | 25 | 15 | All SZGR 2.0 genes in this pathway |
FEVR CTNNB1 TARGETS UP | 682 | 433 | All SZGR 2.0 genes in this pathway |
KINNEY DNMT1 METHYLATION TARGETS | 14 | 6 | All SZGR 2.0 genes in this pathway |