Gene Page: KIAA1024
Summary ?
| GeneID | 23251 |
| Symbol | KIAA1024 |
| Synonyms | - |
| Description | KIAA1024 |
| Reference | HGNC:HGNC:29172|Ensembl:ENSG00000169330|HPRD:17206|Vega:OTTHUMG00000172073 |
| Gene type | protein-coding |
| Map location | 15q25.1 |
| Pascal p-value | 0.017 |
| eGene | Cerebellum Myers' cis & trans |
| Support | Ascano FMRP targets |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs3743068 | chr15 | 79047284 | KIAA1024 | 23251 | 0.03 | cis | ||
| rs17572651 | chr1 | 218943612 | KIAA1024 | 23251 | 0.11 | trans | ||
| rs16829545 | chr2 | 151977407 | KIAA1024 | 23251 | 7.102E-9 | trans | ||
| rs170776 | chr4 | 173276735 | KIAA1024 | 23251 | 0.11 | trans | ||
| rs1396222 | chr4 | 173279496 | KIAA1024 | 23251 | 0.1 | trans | ||
| rs335993 | chr4 | 173321789 | KIAA1024 | 23251 | 0.19 | trans | ||
| rs335980 | chr4 | 173329784 | KIAA1024 | 23251 | 0.07 | trans | ||
| rs10491487 | chr5 | 80323367 | KIAA1024 | 23251 | 0 | trans | ||
| rs16955618 | chr15 | 29937543 | KIAA1024 | 23251 | 1.006E-13 | trans | ||
| rs1041786 | chr21 | 22617710 | KIAA1024 | 23251 | 0.12 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| BROWNE HCMV INFECTION 18HR UP | 178 | 111 | All SZGR 2.0 genes in this pathway |
| LEIN MEDULLA MARKERS | 81 | 48 | All SZGR 2.0 genes in this pathway |
| WEST ADRENOCORTICAL TUMOR DN | 546 | 362 | All SZGR 2.0 genes in this pathway |
| MEISSNER NPC HCP WITH H3 UNMETHYLATED | 536 | 296 | All SZGR 2.0 genes in this pathway |
| MEISSNER BRAIN HCP WITH H3K4ME3 AND H3K27ME3 | 1069 | 729 | All SZGR 2.0 genes in this pathway |
| WANG MLL TARGETS | 289 | 188 | All SZGR 2.0 genes in this pathway |