Summary ?
GeneID2765
SymbolGML
SynonymsLY6DL
Descriptionglycosylphosphatidylinositol anchored molecule like
ReferenceMIM:602370|HGNC:HGNC:4375|Ensembl:ENSG00000104499|HPRD:03844|Vega:OTTHUMG00000164656
Gene typeprotein-coding
Map location8q24.3
Pascal p-value0.027

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation


Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
TRIM320.920.93
VPS26B0.920.93
LASP10.920.93
CSNK1D0.920.92
RAB350.910.92
ZDHHC30.910.91
KIAA11910.910.91
CD2000.910.90
UBQLN40.910.91
AMBRA10.910.91
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
MT-CO2-0.78-0.82
FXYD1-0.78-0.83
AF347015.31-0.77-0.82
AF347015.33-0.76-0.80
MT-CYB-0.75-0.79
HIGD1B-0.75-0.80
AF347015.8-0.74-0.81
S100B-0.74-0.80
AF347015.26-0.73-0.79
AC021016.1-0.73-0.80

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
NIKOLSKY BREAST CANCER 8Q23 Q24 AMPLICON 15787All SZGR 2.0 genes in this pathway
GERY CEBP TARGETS 12690All SZGR 2.0 genes in this pathway
XU GH1 AUTOCRINE TARGETS UP 268157All SZGR 2.0 genes in this pathway
ACEVEDO METHYLATED IN LIVER CANCER DN 940425All SZGR 2.0 genes in this pathway
LABBE WNT3A TARGETS DN 9753All SZGR 2.0 genes in this pathway
CHYLA CBFA2T3 TARGETS DN 242146All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 2ND EGF PULSE ONLY 1725838All SZGR 2.0 genes in this pathway