Gene Page: KCNIP1

Summary
GeneID  30820
Symbol  KCNIP1
Synonyms  KCHIP1|MGC95|VABP
Description  Kv channel interacting protein 1
See related  HGNC:15521|MIM:604660|Ensembl:ENSG00000182132|HPRD:06879|
Locus tag  -
Gene type  protein-coding
Map location  5q35.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.0276 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ZNF2380.950.91
FRMD30.940.94
EML10.930.90
SSBP20.930.93
DAB10.920.94
TMEM1080.920.92
BCL7A0.920.95
LRCH10.910.90
KLHL10.910.93
PAK70.910.94
Top 10 negatively co-expressed genes
SERPINB6-0.68-0.80
FBXO2-0.65-0.68
HEPN1-0.65-0.83
AIFM3-0.64-0.84
HLA-F-0.64-0.84
LHPP-0.64-0.65
ALDOC-0.64-0.77
C5orf53-0.64-0.79
LDHD-0.64-0.71
CLU-0.64-0.77
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005509calcium ion bindingIEA-
GO:0005244voltage-gated ion channel activityIEA-
GO:0005267potassium channel activityIEA-
GO:0005216ion channel activityIEA-
GO:0030955potassium ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007268synaptic transmissionTASneuron, Synap, Neurotransmitter (GO term level: 6)10676964 
GO:0005513detection of calcium ionTAS10676964 
GO:0007165signal transductionTAS10676964 
GO:0006811ion transportIEA-
GO:0006813potassium ion transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005886plasma membraneIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
KCND1KV4.1potassium voltage-gated channel, Shal-related subfamily, member 1-HPRD11423117 
KCND2KIAA1044 | KV4.2 | MGC119702 | MGC119703 | RK5potassium voltage-gated channel, Shal-related subfamily, member 2KChIP1 interacts with Kv4.2 in a Ca2+ dependent manner.BIND15184042 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP 412249All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_DN 1237837All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_INCIPIENT_DN 165106All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_WITH_H3K27ME3_DN 228114All SZGR genes in this pathway
MEISSNER_NPC_HCP_WITH_H3_UNMETHYLATED 536296All SZGR genes in this pathway
MIKKELSEN_IPS_WITH_HCP_H3K27ME3 10276All SZGR genes in this pathway
MIKKELSEN_ES_HCP_WITH_H3K27ME3 4130All SZGR genes in this pathway
MIKKELSEN_MEF_HCP_WITH_H3K27ME3 590403All SZGR genes in this pathway
KRIEG_HYPOXIA_NOT_VIA_KDM3A 770480All SZGR genes in this pathway
PEDRIOLI_MIR31_TARGETS_DN 418245All SZGR genes in this pathway
ACEVEDO_FGFR1_TARGETS_IN_PROSTATE_CANCER_MODEL_DN 308187All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1505075141A,m8hsa-miR-150UCUCCCAACCCUUGUACCAGUG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.