SZGR2

Summary ?

GeneID	3104
Symbol	ZBTB48
Synonyms	HKR3\|ZNF855\|pp9964
Description	zinc finger and BTB domain containing 48
Reference	MIM:165270\|HGNC:HGNC:4930\|Ensembl:ENSG00000204859\|HPRD:01316\|Vega:OTTHUMG00000001438
Gene type	protein-coding
Map location	1p36.3
Pascal p-value	0.028
Sherlock p-value	0.223
eGene	Nucleus accumbens basal ganglia

Gene in Data Sources

Gene set name	Method of gene set	Description	Info
CV:PGCnp	Genome-wide Association Study	GWAS

Section I. Genetics and epigenetics annotation

Section II. Transcriptome annotation

General gene expression (GTEx)

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
Gene	Pearson's Correlation	Spearman's Correlation
HLA-DPA1	0.93	0.93
CD74	0.88	0.90
HLA-DMB	0.86	0.84
HLA-DMA	0.86	0.83
HLA-DQA1	0.82	0.80
HLA-DRB1	0.79	0.84
EVI2B	0.78	0.82
HLA-DPB1	0.76	0.84
TBXAS1	0.74	0.70
BLNK	0.74	0.71

Top 10 negatively co-expressed genes
Gene	Pearson's Correlation	Spearman's Correlation
KIAA1949	-0.53	-0.72
SH3BP2	-0.53	-0.77
TUBB2B	-0.52	-0.76
NKIRAS2	-0.52	-0.67
VAV2	-0.51	-0.71
ZNF551	-0.51	-0.65
AC004017.1	-0.51	-0.67
SH2B2	-0.51	-0.77
ZNF821	-0.51	-0.65
PCDHB18	-0.50	-0.66

Section V. Pathway annotation