Gene Page: HLA-DPA1
Summary ?
| GeneID | 3113 |
| Symbol | HLA-DPA1 |
| Synonyms | DP(W3)|DP(W4)|HLA-DP1A|HLADP|HLASB|PLT1 |
| Description | major histocompatibility complex, class II, DP alpha 1 |
| Reference | MIM:142880|HGNC:HGNC:4938|Ensembl:ENSG00000231389|HPRD:00835|Vega:OTTHUMG00000031058 |
| Gene type | protein-coding |
| Map location | 6p21.3 |
| Pascal p-value | 1.951E-5 |
| Sherlock p-value | 0.742 |
| Fetal beta | -1.742 |
| eGene | Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Myers' cis & trans Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
| GSMA_I | Genome scan meta-analysis | Psr: 0.033 | |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs7655541 | chr4 | 112245563 | HLA-DPA1 | 3113 | 0.15 | trans | ||
| rs11216720 | chr11 | 117909100 | HLA-DPA1 | 3113 | 0.05 | trans | ||
| rs12223165 | chr11 | 117910016 | HLA-DPA1 | 3113 | 0.05 | trans | ||
| rs11216730 | chr11 | 117918701 | HLA-DPA1 | 3113 | 0.03 | trans | ||
| rs72873911 | 6 | 33024814 | HLA-DPA1 | ENSG00000231389.3 | 4.741E-8 | 0 | 16735 | gtex_brain_putamen_basal |
| rs67643877 | 6 | 33024823 | HLA-DPA1 | ENSG00000231389.3 | 4.74E-8 | 0 | 16726 | gtex_brain_putamen_basal |
| rs56301606 | 6 | 33024908 | HLA-DPA1 | ENSG00000231389.3 | 4.918E-8 | 0 | 16641 | gtex_brain_putamen_basal |
| rs58083473 | 6 | 33024972 | HLA-DPA1 | ENSG00000231389.3 | 5.089E-8 | 0 | 16577 | gtex_brain_putamen_basal |
| rs55752341 | 6 | 33025044 | HLA-DPA1 | ENSG00000231389.3 | 5.324E-8 | 0 | 16505 | gtex_brain_putamen_basal |
| rs56064519 | 6 | 33025050 | HLA-DPA1 | ENSG00000231389.3 | 5.323E-8 | 0 | 16499 | gtex_brain_putamen_basal |
| rs57441145 | 6 | 33025107 | HLA-DPA1 | ENSG00000231389.3 | 1.898E-9 | 0 | 16442 | gtex_brain_putamen_basal |
| rs9380335 | 6 | 33025174 | HLA-DPA1 | ENSG00000231389.3 | 1.795E-9 | 0 | 16375 | gtex_brain_putamen_basal |
| rs17220829 | 6 | 33025386 | HLA-DPA1 | ENSG00000231389.3 | 6.955E-8 | 0 | 16163 | gtex_brain_putamen_basal |
| rs4604307 | 6 | 33025671 | HLA-DPA1 | ENSG00000231389.3 | 1.842E-9 | 0 | 15878 | gtex_brain_putamen_basal |
| rs7775838 | 6 | 33025712 | HLA-DPA1 | ENSG00000231389.3 | 7.686E-8 | 0 | 15837 | gtex_brain_putamen_basal |
| rs7757860 | 6 | 33025740 | HLA-DPA1 | ENSG00000231389.3 | 7.686E-8 | 0 | 15809 | gtex_brain_putamen_basal |
| rs5875432 | 6 | 33025792 | HLA-DPA1 | ENSG00000231389.3 | 1.846E-9 | 0 | 15757 | gtex_brain_putamen_basal |
| rs7742205 | 6 | 33026084 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15465 | gtex_brain_putamen_basal |
| rs7741912 | 6 | 33026087 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15462 | gtex_brain_putamen_basal |
| rs11479653 | 6 | 33026139 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15410 | gtex_brain_putamen_basal |
| rs2894313 | 6 | 33026169 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15380 | gtex_brain_putamen_basal |
| rs17220885 | 6 | 33026185 | HLA-DPA1 | ENSG00000231389.3 | 7.685E-8 | 0 | 15364 | gtex_brain_putamen_basal |
| rs35144340 | 6 | 33026214 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15335 | gtex_brain_putamen_basal |
| rs2395309 | 6 | 33026246 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15303 | gtex_brain_putamen_basal |
| rs2395310 | 6 | 33026316 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15233 | gtex_brain_putamen_basal |
| rs34889247 | 6 | 33026388 | HLA-DPA1 | ENSG00000231389.3 | 7.715E-8 | 0 | 15161 | gtex_brain_putamen_basal |
| rs73415237 | 6 | 33026423 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 15126 | gtex_brain_putamen_basal |
| rs73415239 | 6 | 33026433 | HLA-DPA1 | ENSG00000231389.3 | 7.715E-8 | 0 | 15116 | gtex_brain_putamen_basal |
| rs67632751 | 6 | 33026517 | HLA-DPA1 | ENSG00000231389.3 | 1.83E-9 | 0 | 15032 | gtex_brain_putamen_basal |
| rs73415240 | 6 | 33026524 | HLA-DPA1 | ENSG00000231389.3 | 1.83E-9 | 0 | 15025 | gtex_brain_putamen_basal |
| rs72873917 | 6 | 33026540 | HLA-DPA1 | ENSG00000231389.3 | 1.83E-9 | 0 | 15009 | gtex_brain_putamen_basal |
| rs34937821 | 6 | 33026553 | HLA-DPA1 | ENSG00000231389.3 | 1.83E-9 | 0 | 14996 | gtex_brain_putamen_basal |
| rs34687999 | 6 | 33026604 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 14945 | gtex_brain_putamen_basal |
| rs35593095 | 6 | 33026606 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 14943 | gtex_brain_putamen_basal |
| rs72873920 | 6 | 33026673 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 14876 | gtex_brain_putamen_basal |
| rs67144300 | 6 | 33026697 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 14852 | gtex_brain_putamen_basal |
| rs73738011 | 6 | 33028758 | HLA-DPA1 | ENSG00000231389.3 | 1.763E-9 | 0 | 12791 | gtex_brain_putamen_basal |
| rs67047708 | 6 | 33028830 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 12719 | gtex_brain_putamen_basal |
| rs66720176 | 6 | 33028988 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 12561 | gtex_brain_putamen_basal |
| rs66780929 | 6 | 33029009 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 12540 | gtex_brain_putamen_basal |
| rs67214734 | 6 | 33029035 | HLA-DPA1 | ENSG00000231389.3 | 7.715E-8 | 0 | 12514 | gtex_brain_putamen_basal |
| rs199986929 | 6 | 33029079 | HLA-DPA1 | ENSG00000231389.3 | 1.646E-8 | 0 | 12470 | gtex_brain_putamen_basal |
| rs200852361 | 6 | 33029080 | HLA-DPA1 | ENSG00000231389.3 | 2.96E-8 | 0 | 12469 | gtex_brain_putamen_basal |
| rs72873924 | 6 | 33029125 | HLA-DPA1 | ENSG00000231389.3 | 1.415E-9 | 0 | 12424 | gtex_brain_putamen_basal |
| rs73738013 | 6 | 33029137 | HLA-DPA1 | ENSG00000231389.3 | 1.415E-9 | 0 | 12412 | gtex_brain_putamen_basal |
| rs9885608 | 6 | 33029148 | HLA-DPA1 | ENSG00000231389.3 | 1.092E-8 | 0 | 12401 | gtex_brain_putamen_basal |
| rs73415247 | 6 | 33029205 | HLA-DPA1 | ENSG00000231389.3 | 1.79E-9 | 0 | 12344 | gtex_brain_putamen_basal |
| rs114788682 | 6 | 33029216 | HLA-DPA1 | ENSG00000231389.3 | 8.976E-8 | 0 | 12333 | gtex_brain_putamen_basal |
| rs72873927 | 6 | 33029255 | HLA-DPA1 | ENSG00000231389.3 | 1.653E-9 | 0 | 12294 | gtex_brain_putamen_basal |
| rs67022713 | 6 | 33029276 | HLA-DPA1 | ENSG00000231389.3 | 1.647E-9 | 0 | 12273 | gtex_brain_putamen_basal |
| rs72873929 | 6 | 33029326 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 12223 | gtex_brain_putamen_basal |
| rs114390018 | 6 | 33029384 | HLA-DPA1 | ENSG00000231389.3 | 2.432E-9 | 0 | 12165 | gtex_brain_putamen_basal |
| rs116916694 | 6 | 33029385 | HLA-DPA1 | ENSG00000231389.3 | 3.453E-9 | 0 | 12164 | gtex_brain_putamen_basal |
| rs111509059 | 6 | 33029392 | HLA-DPA1 | ENSG00000231389.3 | 5.909E-9 | 0 | 12157 | gtex_brain_putamen_basal |
| rs67475104 | 6 | 33029409 | HLA-DPA1 | ENSG00000231389.3 | 6.021E-9 | 0 | 12140 | gtex_brain_putamen_basal |
| rs72873931 | 6 | 33029456 | HLA-DPA1 | ENSG00000231389.3 | 7.708E-8 | 0 | 12093 | gtex_brain_putamen_basal |
| rs72873932 | 6 | 33029460 | HLA-DPA1 | ENSG00000231389.3 | 7.708E-8 | 0 | 12089 | gtex_brain_putamen_basal |
| rs72873933 | 6 | 33029491 | HLA-DPA1 | ENSG00000231389.3 | 7.803E-8 | 0 | 12058 | gtex_brain_putamen_basal |
| rs112752977 | 6 | 33029506 | HLA-DPA1 | ENSG00000231389.3 | 7.817E-8 | 0 | 12043 | gtex_brain_putamen_basal |
| rs113637139 | 6 | 33029511 | HLA-DPA1 | ENSG00000231389.3 | 7.817E-8 | 0 | 12038 | gtex_brain_putamen_basal |
| rs113457518 | 6 | 33029514 | HLA-DPA1 | ENSG00000231389.3 | 7.773E-8 | 0 | 12035 | gtex_brain_putamen_basal |
| rs59342333 | 6 | 33029599 | HLA-DPA1 | ENSG00000231389.3 | 2.853E-8 | 0 | 11950 | gtex_brain_putamen_basal |
| rs60461436 | 6 | 33029639 | HLA-DPA1 | ENSG00000231389.3 | 2.853E-8 | 0 | 11910 | gtex_brain_putamen_basal |
| rs59423236 | 6 | 33029668 | HLA-DPA1 | ENSG00000231389.3 | 7.734E-8 | 0 | 11881 | gtex_brain_putamen_basal |
| rs73738024 | 6 | 33029687 | HLA-DPA1 | ENSG00000231389.3 | 7.668E-8 | 0 | 11862 | gtex_brain_putamen_basal |
| rs73738027 | 6 | 33029690 | HLA-DPA1 | ENSG00000231389.3 | 7.668E-8 | 0 | 11859 | gtex_brain_putamen_basal |
| rs6923131 | 6 | 33029729 | HLA-DPA1 | ENSG00000231389.3 | 5.829E-7 | 0 | 11820 | gtex_brain_putamen_basal |
| rs72873934 | 6 | 33029775 | HLA-DPA1 | ENSG00000231389.3 | 4.401E-9 | 0 | 11774 | gtex_brain_putamen_basal |
| rs72873935 | 6 | 33029776 | HLA-DPA1 | ENSG00000231389.3 | 4.328E-9 | 0 | 11773 | gtex_brain_putamen_basal |
| rs200359273 | 6 | 33029776 | HLA-DPA1 | ENSG00000231389.3 | 1.159E-8 | 0 | 11773 | gtex_brain_putamen_basal |
| rs55950816 | 6 | 33029827 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11722 | gtex_brain_putamen_basal |
| rs116108798 | 6 | 33029925 | HLA-DPA1 | ENSG00000231389.3 | 1.838E-9 | 0 | 11624 | gtex_brain_putamen_basal |
| rs114620642 | 6 | 33029926 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 11623 | gtex_brain_putamen_basal |
| rs80087810 | 6 | 33029930 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11619 | gtex_brain_putamen_basal |
| rs55763051 | 6 | 33029937 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11612 | gtex_brain_putamen_basal |
| rs56348503 | 6 | 33030099 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11450 | gtex_brain_putamen_basal |
| rs9469325 | 6 | 33030441 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 11108 | gtex_brain_putamen_basal |
| rs72873936 | 6 | 33030449 | HLA-DPA1 | ENSG00000231389.3 | 5.918E-9 | 0 | 11100 | gtex_brain_putamen_basal |
| rs67408908 | 6 | 33030470 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11079 | gtex_brain_putamen_basal |
| rs66468857 | 6 | 33030484 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11065 | gtex_brain_putamen_basal |
| rs67396419 | 6 | 33030511 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 11038 | gtex_brain_putamen_basal |
| rs67012664 | 6 | 33030585 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 10964 | gtex_brain_putamen_basal |
| rs67934954 | 6 | 33030620 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 10929 | gtex_brain_putamen_basal |
| rs67635640 | 6 | 33030730 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 10819 | gtex_brain_putamen_basal |
| rs67714479 | 6 | 33030755 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 10794 | gtex_brain_putamen_basal |
| rs202154495 | 6 | 33030761 | HLA-DPA1 | ENSG00000231389.3 | 6.748E-9 | 0 | 10788 | gtex_brain_putamen_basal |
| rs67511993 | 6 | 33030787 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 10762 | gtex_brain_putamen_basal |
| rs72873939 | 6 | 33030875 | HLA-DPA1 | ENSG00000231389.3 | 1.937E-9 | 0 | 10674 | gtex_brain_putamen_basal |
| rs72873941 | 6 | 33030883 | HLA-DPA1 | ENSG00000231389.3 | 1.937E-9 | 0 | 10666 | gtex_brain_putamen_basal |
| rs200131742 | 6 | 33030931 | HLA-DPA1 | ENSG00000231389.3 | 1.35E-8 | 0 | 10618 | gtex_brain_putamen_basal |
| rs201122264 | 6 | 33030945 | HLA-DPA1 | ENSG00000231389.3 | 1.396E-8 | 0 | 10604 | gtex_brain_putamen_basal |
| rs67510472 | 6 | 33031103 | HLA-DPA1 | ENSG00000231389.3 | 5.505E-9 | 0 | 10446 | gtex_brain_putamen_basal |
| rs112315157 | 6 | 33031261 | HLA-DPA1 | ENSG00000231389.3 | 2.981E-7 | 0 | 10288 | gtex_brain_putamen_basal |
| rs9469326 | 6 | 33031287 | HLA-DPA1 | ENSG00000231389.3 | 2.046E-8 | 0 | 10262 | gtex_brain_putamen_basal |
| rs73415265 | 6 | 33031315 | HLA-DPA1 | ENSG00000231389.3 | 1.042E-9 | 0 | 10234 | gtex_brain_putamen_basal |
| rs112051508 | 6 | 33031406 | HLA-DPA1 | ENSG00000231389.3 | 1.066E-7 | 0 | 10143 | gtex_brain_putamen_basal |
| rs111648287 | 6 | 33031414 | HLA-DPA1 | ENSG00000231389.3 | 2.243E-8 | 0 | 10135 | gtex_brain_putamen_basal |
| rs113281050 | 6 | 33031417 | HLA-DPA1 | ENSG00000231389.3 | 4.235E-9 | 0 | 10132 | gtex_brain_putamen_basal |
| rs116184699 | 6 | 33031443 | HLA-DPA1 | ENSG00000231389.3 | 1.243E-7 | 0 | 10106 | gtex_brain_putamen_basal |
| rs116733694 | 6 | 33031467 | HLA-DPA1 | ENSG00000231389.3 | 3.467E-9 | 0 | 10082 | gtex_brain_putamen_basal |
| rs9469327 | 6 | 33031468 | HLA-DPA1 | ENSG00000231389.3 | 1.197E-7 | 0 | 10081 | gtex_brain_putamen_basal |
| rs113640497 | 6 | 33031503 | HLA-DPA1 | ENSG00000231389.3 | 6.955E-7 | 0 | 10046 | gtex_brain_putamen_basal |
| rs35449774 | 6 | 33031612 | HLA-DPA1 | ENSG00000231389.3 | 1.768E-7 | 0 | 9937 | gtex_brain_putamen_basal |
| rs35953215 | 6 | 33031677 | HLA-DPA1 | ENSG00000231389.3 | 1.694E-9 | 0 | 9872 | gtex_brain_putamen_basal |
| rs34218937 | 6 | 33031689 | HLA-DPA1 | ENSG00000231389.3 | 6.869E-8 | 0 | 9860 | gtex_brain_putamen_basal |
| rs34740152 | 6 | 33031691 | HLA-DPA1 | ENSG00000231389.3 | 1.686E-9 | 0 | 9858 | gtex_brain_putamen_basal |
| rs36030764 | 6 | 33031767 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9782 | gtex_brain_putamen_basal |
| rs66948925 | 6 | 33031809 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9740 | gtex_brain_putamen_basal |
| rs66636430 | 6 | 33031819 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9730 | gtex_brain_putamen_basal |
| rs200091412 | 6 | 33031920 | HLA-DPA1 | ENSG00000231389.3 | 1.868E-9 | 0 | 9629 | gtex_brain_putamen_basal |
| rs72873946 | 6 | 33031934 | HLA-DPA1 | ENSG00000231389.3 | 1.851E-9 | 0 | 9615 | gtex_brain_putamen_basal |
| rs66882283 | 6 | 33031986 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9563 | gtex_brain_putamen_basal |
| rs67514692 | 6 | 33031994 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9555 | gtex_brain_putamen_basal |
| rs17220899 | 6 | 33032096 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9453 | gtex_brain_putamen_basal |
| rs376277904 | 6 | 33032122 | HLA-DPA1 | ENSG00000231389.3 | 6.046E-9 | 0 | 9427 | gtex_brain_putamen_basal |
| rs17220913 | 6 | 33032159 | HLA-DPA1 | ENSG00000231389.3 | 1.851E-9 | 0 | 9390 | gtex_brain_putamen_basal |
| rs17214512 | 6 | 33032174 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9375 | gtex_brain_putamen_basal |
| rs17214519 | 6 | 33032188 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9361 | gtex_brain_putamen_basal |
| rs17214526 | 6 | 33032206 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9343 | gtex_brain_putamen_basal |
| rs17214533 | 6 | 33032272 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9277 | gtex_brain_putamen_basal |
| rs17214540 | 6 | 33032277 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9272 | gtex_brain_putamen_basal |
| rs17220927 | 6 | 33032347 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 9202 | gtex_brain_putamen_basal |
| rs17220934 | 6 | 33032358 | HLA-DPA1 | ENSG00000231389.3 | 1.863E-9 | 0 | 9191 | gtex_brain_putamen_basal |
| rs67697941 | 6 | 33032394 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 9155 | gtex_brain_putamen_basal |
| rs17214555 | 6 | 33032430 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 9119 | gtex_brain_putamen_basal |
| rs17214562 | 6 | 33032585 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 8964 | gtex_brain_putamen_basal |
| rs17214567 | 6 | 33032600 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 8949 | gtex_brain_putamen_basal |
| rs17220948 | 6 | 33032623 | HLA-DPA1 | ENSG00000231389.3 | 9.267E-8 | 0 | 8926 | gtex_brain_putamen_basal |
| rs2071366 | 6 | 33032627 | HLA-DPA1 | ENSG00000231389.3 | 1.226E-8 | 0 | 8922 | gtex_brain_putamen_basal |
| rs17220961 | 6 | 33032636 | HLA-DPA1 | ENSG00000231389.3 | 2.123E-9 | 0 | 8913 | gtex_brain_putamen_basal |
| rs17220968 | 6 | 33032663 | HLA-DPA1 | ENSG00000231389.3 | 1.833E-9 | 0 | 8886 | gtex_brain_putamen_basal |
| rs17214573 | 6 | 33032668 | HLA-DPA1 | ENSG00000231389.3 | 1.833E-9 | 0 | 8881 | gtex_brain_putamen_basal |
| rs17214580 | 6 | 33032692 | HLA-DPA1 | ENSG00000231389.3 | 1.834E-9 | 0 | 8857 | gtex_brain_putamen_basal |
| rs17214587 | 6 | 33032698 | HLA-DPA1 | ENSG00000231389.3 | 1.834E-9 | 0 | 8851 | gtex_brain_putamen_basal |
| rs17214594 | 6 | 33032703 | HLA-DPA1 | ENSG00000231389.3 | 1.852E-9 | 0 | 8846 | gtex_brain_putamen_basal |
| rs2071365 | 6 | 33032788 | HLA-DPA1 | ENSG00000231389.3 | 1.856E-9 | 0 | 8761 | gtex_brain_putamen_basal |
| rs1042926 | 6 | 33032822 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8727 | gtex_brain_putamen_basal |
| rs1042920 | 6 | 33032831 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8718 | gtex_brain_putamen_basal |
| rs1042901 | 6 | 33032865 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8684 | gtex_brain_putamen_basal |
| rs1042872 | 6 | 33032905 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8644 | gtex_brain_putamen_basal |
| rs368570602 | 6 | 33032920 | HLA-DPA1 | ENSG00000231389.3 | 1.274E-8 | 0 | 8629 | gtex_brain_putamen_basal |
| rs8486 | 6 | 33032968 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8581 | gtex_brain_putamen_basal |
| rs7905 | 6 | 33032975 | HLA-DPA1 | ENSG00000231389.3 | 6.436E-8 | 0 | 8574 | gtex_brain_putamen_basal |
| rs3077 | 6 | 33033022 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8527 | gtex_brain_putamen_basal |
| rs1042688 | 6 | 33033055 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8494 | gtex_brain_putamen_basal |
| rs3211475 | 6 | 33033058 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8491 | gtex_brain_putamen_basal |
| rs35188681 | 6 | 33033146 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8403 | gtex_brain_putamen_basal |
| rs36030612 | 6 | 33033170 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8379 | gtex_brain_putamen_basal |
| rs34742617 | 6 | 33033235 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 8314 | gtex_brain_putamen_basal |
| rs72867687 | 6 | 33033266 | HLA-DPA1 | ENSG00000231389.3 | 1.821E-9 | 0 | 8283 | gtex_brain_putamen_basal |
| rs72867689 | 6 | 33033267 | HLA-DPA1 | ENSG00000231389.3 | 1.822E-9 | 0 | 8282 | gtex_brain_putamen_basal |
| rs67597807 | 6 | 33033287 | HLA-DPA1 | ENSG00000231389.3 | 1.935E-9 | 0 | 8262 | gtex_brain_putamen_basal |
| rs66951571 | 6 | 33033313 | HLA-DPA1 | ENSG00000231389.3 | 6.653E-8 | 0 | 8236 | gtex_brain_putamen_basal |
| rs7751953 | 6 | 33033351 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 8198 | gtex_brain_putamen_basal |
| rs72500558 | 6 | 33033357 | HLA-DPA1 | ENSG00000231389.3 | 1.935E-9 | 0 | 8192 | gtex_brain_putamen_basal |
| rs67476218 | 6 | 33033388 | HLA-DPA1 | ENSG00000231389.3 | 1.935E-9 | 0 | 8161 | gtex_brain_putamen_basal |
| rs67786321 | 6 | 33033390 | HLA-DPA1 | ENSG00000231389.3 | 1.935E-9 | 0 | 8159 | gtex_brain_putamen_basal |
| rs67640541 | 6 | 33033484 | HLA-DPA1 | ENSG00000231389.3 | 2.077E-9 | 0 | 8065 | gtex_brain_putamen_basal |
| rs72500559 | 6 | 33033494 | HLA-DPA1 | ENSG00000231389.3 | 2.09E-9 | 0 | 8055 | gtex_brain_putamen_basal |
| rs73739618 | 6 | 33033507 | HLA-DPA1 | ENSG00000231389.3 | 2.09E-9 | 0 | 8042 | gtex_brain_putamen_basal |
| rs72867692 | 6 | 33033520 | HLA-DPA1 | ENSG00000231389.3 | 2.09E-9 | 0 | 8029 | gtex_brain_putamen_basal |
| rs35887191 | 6 | 33033541 | HLA-DPA1 | ENSG00000231389.3 | 2.09E-9 | 0 | 8008 | gtex_brain_putamen_basal |
| rs199849503 | 6 | 33033546 | HLA-DPA1 | ENSG00000231389.3 | 3.819E-9 | 0 | 8003 | gtex_brain_putamen_basal |
| rs35528007 | 6 | 33033608 | HLA-DPA1 | ENSG00000231389.3 | 1.856E-9 | 0 | 7941 | gtex_brain_putamen_basal |
| rs67733930 | 6 | 33033630 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7919 | gtex_brain_putamen_basal |
| rs73400009 | 6 | 33033639 | HLA-DPA1 | ENSG00000231389.3 | 1.856E-9 | 0 | 7910 | gtex_brain_putamen_basal |
| rs151124723 | 6 | 33033668 | HLA-DPA1 | ENSG00000231389.3 | 1.806E-9 | 0 | 7881 | gtex_brain_putamen_basal |
| rs73739621 | 6 | 33033710 | HLA-DPA1 | ENSG00000231389.3 | 7.533E-8 | 0 | 7839 | gtex_brain_putamen_basal |
| rs11967655 | 6 | 33033738 | HLA-DPA1 | ENSG00000231389.3 | 1.184E-8 | 0 | 7811 | gtex_brain_putamen_basal |
| rs66696871 | 6 | 33033787 | HLA-DPA1 | ENSG00000231389.3 | 1.727E-9 | 0 | 7762 | gtex_brain_putamen_basal |
| rs68085274 | 6 | 33033791 | HLA-DPA1 | ENSG00000231389.3 | 1.727E-9 | 0 | 7758 | gtex_brain_putamen_basal |
| rs116664945 | 6 | 33033811 | HLA-DPA1 | ENSG00000231389.3 | 5.789E-8 | 0 | 7738 | gtex_brain_putamen_basal |
| rs111789468 | 6 | 33033824 | HLA-DPA1 | ENSG00000231389.3 | 5.789E-8 | 0 | 7725 | gtex_brain_putamen_basal |
| rs115386596 | 6 | 33033837 | HLA-DPA1 | ENSG00000231389.3 | 5.988E-8 | 0 | 7712 | gtex_brain_putamen_basal |
| rs68148632 | 6 | 33033849 | HLA-DPA1 | ENSG00000231389.3 | 1.761E-9 | 0 | 7700 | gtex_brain_putamen_basal |
| rs68076625 | 6 | 33033894 | HLA-DPA1 | ENSG00000231389.3 | 5.584E-9 | 0 | 7655 | gtex_brain_putamen_basal |
| rs66518139 | 6 | 33033919 | HLA-DPA1 | ENSG00000231389.3 | 5.584E-9 | 0 | 7630 | gtex_brain_putamen_basal |
| rs72867693 | 6 | 33033939 | HLA-DPA1 | ENSG00000231389.3 | 5.584E-9 | 0 | 7610 | gtex_brain_putamen_basal |
| rs67530640 | 6 | 33033952 | HLA-DPA1 | ENSG00000231389.3 | 1.896E-9 | 0 | 7597 | gtex_brain_putamen_basal |
| rs66967466 | 6 | 33033961 | HLA-DPA1 | ENSG00000231389.3 | 1.896E-9 | 0 | 7588 | gtex_brain_putamen_basal |
| rs67247679 | 6 | 33034007 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7542 | gtex_brain_putamen_basal |
| rs68172213 | 6 | 33034076 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7473 | gtex_brain_putamen_basal |
| rs68141899 | 6 | 33034079 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7470 | gtex_brain_putamen_basal |
| rs6899851 | 6 | 33034113 | HLA-DPA1 | ENSG00000231389.3 | 2.512E-9 | 0 | 7436 | gtex_brain_putamen_basal |
| rs76589166 | 6 | 33034120 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7429 | gtex_brain_putamen_basal |
| rs6919972 | 6 | 33034177 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 7372 | gtex_brain_putamen_basal |
| rs67252575 | 6 | 33034223 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7326 | gtex_brain_putamen_basal |
| rs72867694 | 6 | 33034240 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 7309 | gtex_brain_putamen_basal |
| rs68150759 | 6 | 33034296 | HLA-DPA1 | ENSG00000231389.3 | 1.842E-9 | 0 | 7253 | gtex_brain_putamen_basal |
| rs67646359 | 6 | 33034305 | HLA-DPA1 | ENSG00000231389.3 | 1.842E-9 | 0 | 7244 | gtex_brain_putamen_basal |
| rs200301369 | 6 | 33034352 | HLA-DPA1 | ENSG00000231389.3 | 9.888E-9 | 0 | 7197 | gtex_brain_putamen_basal |
| rs73739627 | 6 | 33034353 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 7196 | gtex_brain_putamen_basal |
| rs72867695 | 6 | 33034354 | HLA-DPA1 | ENSG00000231389.3 | 1.805E-9 | 0 | 7195 | gtex_brain_putamen_basal |
| rs6920457 | 6 | 33034399 | HLA-DPA1 | ENSG00000231389.3 | 1.205E-8 | 0 | 7150 | gtex_brain_putamen_basal |
| rs72867696 | 6 | 33034404 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 7145 | gtex_brain_putamen_basal |
| rs35835875 | 6 | 33034421 | HLA-DPA1 | ENSG00000231389.3 | 2.947E-9 | 0 | 7128 | gtex_brain_putamen_basal |
| rs34489465 | 6 | 33034471 | HLA-DPA1 | ENSG00000231389.3 | 1.991E-9 | 0 | 7078 | gtex_brain_putamen_basal |
| rs73739631 | 6 | 33034473 | HLA-DPA1 | ENSG00000231389.3 | 2.529E-8 | 0 | 7076 | gtex_brain_putamen_basal |
| rs34041463 | 6 | 33034478 | HLA-DPA1 | ENSG00000231389.3 | 1.994E-9 | 0 | 7071 | gtex_brain_putamen_basal |
| rs34018094 | 6 | 33034484 | HLA-DPA1 | ENSG00000231389.3 | 1.994E-9 | 0 | 7065 | gtex_brain_putamen_basal |
| rs35683320 | 6 | 33034507 | HLA-DPA1 | ENSG00000231389.3 | 2.872E-9 | 0 | 7042 | gtex_brain_putamen_basal |
| rs66811558 | 6 | 33034518 | HLA-DPA1 | ENSG00000231389.3 | 3.025E-9 | 0 | 7031 | gtex_brain_putamen_basal |
| rs67106216 | 6 | 33034530 | HLA-DPA1 | ENSG00000231389.3 | 3.025E-9 | 0 | 7019 | gtex_brain_putamen_basal |
| rs34596699 | 6 | 33034577 | HLA-DPA1 | ENSG00000231389.3 | 3.025E-9 | 0 | 6972 | gtex_brain_putamen_basal |
| rs35030344 | 6 | 33034653 | HLA-DPA1 | ENSG00000231389.3 | 3.025E-9 | 0 | 6896 | gtex_brain_putamen_basal |
| rs36050357 | 6 | 33034699 | HLA-DPA1 | ENSG00000231389.3 | 3.004E-9 | 0 | 6850 | gtex_brain_putamen_basal |
| rs35877170 | 6 | 33034702 | HLA-DPA1 | ENSG00000231389.3 | 3.004E-9 | 0 | 6847 | gtex_brain_putamen_basal |
| rs201782764 | 6 | 33034725 | HLA-DPA1 | ENSG00000231389.3 | 1.731E-8 | 0 | 6824 | gtex_brain_putamen_basal |
| rs200860809 | 6 | 33034727 | HLA-DPA1 | ENSG00000231389.3 | 1.731E-8 | 0 | 6822 | gtex_brain_putamen_basal |
| rs73739632 | 6 | 33034745 | HLA-DPA1 | ENSG00000231389.3 | 4.682E-9 | 0 | 6804 | gtex_brain_putamen_basal |
| rs73739633 | 6 | 33034746 | HLA-DPA1 | ENSG00000231389.3 | 4.673E-9 | 0 | 6803 | gtex_brain_putamen_basal |
| rs9469331 | 6 | 33034785 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 6764 | gtex_brain_putamen_basal |
| rs9469332 | 6 | 33034876 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 6673 | gtex_brain_putamen_basal |
| rs34763441 | 6 | 33034900 | HLA-DPA1 | ENSG00000231389.3 | 1.86E-9 | 0 | 6649 | gtex_brain_putamen_basal |
| rs34013339 | 6 | 33034906 | HLA-DPA1 | ENSG00000231389.3 | 1.862E-9 | 0 | 6643 | gtex_brain_putamen_basal |
| rs72867701 | 6 | 33034930 | HLA-DPA1 | ENSG00000231389.3 | 1.874E-9 | 0 | 6619 | gtex_brain_putamen_basal |
| rs116487412 | 6 | 33034931 | HLA-DPA1 | ENSG00000231389.3 | 1.874E-9 | 0 | 6618 | gtex_brain_putamen_basal |
| rs72870103 | 6 | 33034956 | HLA-DPA1 | ENSG00000231389.3 | 1.849E-9 | 0 | 6593 | gtex_brain_putamen_basal |
| rs9469334 | 6 | 33034992 | HLA-DPA1 | ENSG00000231389.3 | 2.092E-9 | 0 | 6557 | gtex_brain_putamen_basal |
| rs73400033 | 6 | 33035020 | HLA-DPA1 | ENSG00000231389.3 | 1.848E-9 | 0 | 6529 | gtex_brain_putamen_basal |
| rs142305944 | 6 | 33035071 | HLA-DPA1 | ENSG00000231389.3 | 2.276E-9 | 0 | 6478 | gtex_brain_putamen_basal |
| rs112796164 | 6 | 33035088 | HLA-DPA1 | ENSG00000231389.3 | 2.267E-9 | 0 | 6461 | gtex_brain_putamen_basal |
| rs146542010 | 6 | 33035095 | HLA-DPA1 | ENSG00000231389.3 | 2.209E-9 | 0 | 6454 | gtex_brain_putamen_basal |
| rs200365821 | 6 | 33035099 | HLA-DPA1 | ENSG00000231389.3 | 2.828E-9 | 0 | 6450 | gtex_brain_putamen_basal |
| rs72870105 | 6 | 33035134 | HLA-DPA1 | ENSG00000231389.3 | 8.985E-9 | 0 | 6415 | gtex_brain_putamen_basal |
| rs79229871 | 6 | 33035143 | HLA-DPA1 | ENSG00000231389.3 | 2.992E-9 | 0 | 6406 | gtex_brain_putamen_basal |
| rs67844630 | 6 | 33035149 | HLA-DPA1 | ENSG00000231389.3 | 2.992E-9 | 0 | 6400 | gtex_brain_putamen_basal |
| rs73400034 | 6 | 33035272 | HLA-DPA1 | ENSG00000231389.3 | 2.782E-9 | 0 | 6277 | gtex_brain_putamen_basal |
| rs115770992 | 6 | 33035288 | HLA-DPA1 | ENSG00000231389.3 | 2.798E-9 | 0 | 6261 | gtex_brain_putamen_basal |
| rs72870107 | 6 | 33035330 | HLA-DPA1 | ENSG00000231389.3 | 1.872E-9 | 0 | 6219 | gtex_brain_putamen_basal |
| rs66859394 | 6 | 33035349 | HLA-DPA1 | ENSG00000231389.3 | 1.891E-9 | 0 | 6200 | gtex_brain_putamen_basal |
| rs66468505 | 6 | 33035395 | HLA-DPA1 | ENSG00000231389.3 | 1.866E-9 | 0 | 6154 | gtex_brain_putamen_basal |
| rs67012450 | 6 | 33035398 | HLA-DPA1 | ENSG00000231389.3 | 1.866E-9 | 0 | 6151 | gtex_brain_putamen_basal |
| rs72870108 | 6 | 33035424 | HLA-DPA1 | ENSG00000231389.3 | 7.753E-8 | 0 | 6125 | gtex_brain_putamen_basal |
| rs66717880 | 6 | 33035436 | HLA-DPA1 | ENSG00000231389.3 | 1.861E-9 | 0 | 6113 | gtex_brain_putamen_basal |
| rs1054031 | 6 | 33035513 | HLA-DPA1 | ENSG00000231389.3 | 1.711E-9 | 0 | 6036 | gtex_brain_putamen_basal |
| rs1054030 | 6 | 33035514 | HLA-DPA1 | ENSG00000231389.3 | 1.711E-9 | 0 | 6035 | gtex_brain_putamen_basal |
| rs1054026 | 6 | 33035518 | HLA-DPA1 | ENSG00000231389.3 | 1.713E-9 | 0 | 6031 | gtex_brain_putamen_basal |
| rs201330042 | 6 | 33035670 | HLA-DPA1 | ENSG00000231389.3 | 1.97E-9 | 0 | 5879 | gtex_brain_putamen_basal |
| rs59419782 | 6 | 33035829 | HLA-DPA1 | ENSG00000231389.3 | 1.174E-9 | 0 | 5720 | gtex_brain_putamen_basal |
| rs73400043 | 6 | 33035845 | HLA-DPA1 | ENSG00000231389.3 | 1.174E-9 | 0 | 5704 | gtex_brain_putamen_basal |
| rs72870109 | 6 | 33035855 | HLA-DPA1 | ENSG00000231389.3 | 1.174E-9 | 0 | 5694 | gtex_brain_putamen_basal |
| rs9469341 | 6 | 33035877 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 5672 | gtex_brain_putamen_basal |
| rs72870110 | 6 | 33035887 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5662 | gtex_brain_putamen_basal |
| rs1062658 | 6 | 33035925 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5624 | gtex_brain_putamen_basal |
| rs3179779 | 6 | 33035969 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 5580 | gtex_brain_putamen_basal |
| rs3179778 | 6 | 33035974 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5575 | gtex_brain_putamen_basal |
| rs3180557 | 6 | 33035980 | HLA-DPA1 | ENSG00000231389.3 | 1.844E-9 | 0 | 5569 | gtex_brain_putamen_basal |
| rs377417566 | 6 | 33035992 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5557 | gtex_brain_putamen_basal |
| rs3179776 | 6 | 33036003 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5546 | gtex_brain_putamen_basal |
| rs67818943 | 6 | 33036085 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5464 | gtex_brain_putamen_basal |
| rs3180555 | 6 | 33036116 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5433 | gtex_brain_putamen_basal |
| rs201941385 | 6 | 33036133 | HLA-DPA1 | ENSG00000231389.3 | 1.852E-9 | 0 | 5416 | gtex_brain_putamen_basal |
| rs3180554 | 6 | 33036177 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 5372 | gtex_brain_putamen_basal |
| rs3180553 | 6 | 33036210 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 5339 | gtex_brain_putamen_basal |
| rs67516795 | 6 | 33036233 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5316 | gtex_brain_putamen_basal |
| rs67476989 | 6 | 33036242 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5307 | gtex_brain_putamen_basal |
| rs72879609 | 6 | 33036312 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5237 | gtex_brain_putamen_basal |
| rs68071176 | 6 | 33036388 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5161 | gtex_brain_putamen_basal |
| rs73400048 | 6 | 33036394 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 5155 | gtex_brain_putamen_basal |
| rs1042434 | 6 | 33036505 | HLA-DPA1 | ENSG00000231389.3 | 1.206E-8 | 0 | 5044 | gtex_brain_putamen_basal |
| rs34370305 | 6 | 33036617 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4932 | gtex_brain_putamen_basal |
| rs73739662 | 6 | 33036630 | HLA-DPA1 | ENSG00000231389.3 | 1.827E-9 | 0 | 4919 | gtex_brain_putamen_basal |
| rs73739663 | 6 | 33036631 | HLA-DPA1 | ENSG00000231389.3 | 1.846E-9 | 0 | 4918 | gtex_brain_putamen_basal |
| rs77350016 | 6 | 33036708 | HLA-DPA1 | ENSG00000231389.3 | 1.846E-9 | 0 | 4841 | gtex_brain_putamen_basal |
| rs77981473 | 6 | 33036709 | HLA-DPA1 | ENSG00000231389.3 | 1.846E-9 | 0 | 4840 | gtex_brain_putamen_basal |
| rs35947638 | 6 | 33036717 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4832 | gtex_brain_putamen_basal |
| rs1042308 | 6 | 33036853 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4696 | gtex_brain_putamen_basal |
| rs2308930 | 6 | 33036951 | HLA-DPA1 | ENSG00000231389.3 | 1.846E-9 | 0 | 4598 | gtex_brain_putamen_basal |
| rs2308929 | 6 | 33036959 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4590 | gtex_brain_putamen_basal |
| rs2308928 | 6 | 33036971 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4578 | gtex_brain_putamen_basal |
| rs1042190 | 6 | 33036999 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4550 | gtex_brain_putamen_basal |
| rs73739671 | 6 | 33037080 | HLA-DPA1 | ENSG00000231389.3 | 1.659E-9 | 0 | 4469 | gtex_brain_putamen_basal |
| rs34140193 | 6 | 33037082 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4467 | gtex_brain_putamen_basal |
| rs34950776 | 6 | 33037104 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4445 | gtex_brain_putamen_basal |
| rs67201607 | 6 | 33037142 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4407 | gtex_brain_putamen_basal |
| rs3830066 | 6 | 33037187 | HLA-DPA1 | ENSG00000231389.3 | 4.207E-9 | 0 | 4362 | gtex_brain_putamen_basal |
| rs36081724 | 6 | 33037265 | HLA-DPA1 | ENSG00000231389.3 | 1.85E-9 | 0 | 4284 | gtex_brain_putamen_basal |
| rs34562515 | 6 | 33037279 | HLA-DPA1 | ENSG00000231389.3 | 1.525E-9 | 0 | 4270 | gtex_brain_putamen_basal |
| rs34606334 | 6 | 33037294 | HLA-DPA1 | ENSG00000231389.3 | 1.244E-9 | 0 | 4255 | gtex_brain_putamen_basal |
| rs34682523 | 6 | 33037304 | HLA-DPA1 | ENSG00000231389.3 | 1.09E-9 | 0 | 4245 | gtex_brain_putamen_basal |
| rs35320413 | 6 | 33037409 | HLA-DPA1 | ENSG00000231389.3 | 2.729E-10 | 0 | 4140 | gtex_brain_putamen_basal |
| rs1126543 | 6 | 33037419 | HLA-DPA1 | ENSG00000231389.3 | 2.835E-10 | 0 | 4130 | gtex_brain_putamen_basal |
| rs1126542 | 6 | 33037424 | HLA-DPA1 | ENSG00000231389.3 | 2.696E-10 | 0 | 4125 | gtex_brain_putamen_basal |
| rs1042178 | 6 | 33037522 | HLA-DPA1 | ENSG00000231389.3 | 1.141E-10 | 0 | 4027 | gtex_brain_putamen_basal |
| rs1042177 | 6 | 33037557 | HLA-DPA1 | ENSG00000231389.3 | 4.529E-9 | 0 | 3992 | gtex_brain_putamen_basal |
| rs1042176 | 6 | 33037560 | HLA-DPA1 | ENSG00000231389.3 | 3.756E-9 | 0 | 3989 | gtex_brain_putamen_basal |
| rs2308912 | 6 | 33037579 | HLA-DPA1 | ENSG00000231389.3 | 1.136E-10 | 0 | 3970 | gtex_brain_putamen_basal |
| rs2308911 | 6 | 33037580 | HLA-DPA1 | ENSG00000231389.3 | 1.136E-10 | 0 | 3969 | gtex_brain_putamen_basal |
| rs10214910 | 6 | 33037675 | HLA-DPA1 | ENSG00000231389.3 | 1.708E-9 | 0 | 3874 | gtex_brain_putamen_basal |
| rs66799959 | 6 | 33037690 | HLA-DPA1 | ENSG00000231389.3 | 6.059E-9 | 0 | 3859 | gtex_brain_putamen_basal |
| rs67984906 | 6 | 33037768 | HLA-DPA1 | ENSG00000231389.3 | 1.14E-10 | 0 | 3781 | gtex_brain_putamen_basal |
| rs73739674 | 6 | 33037865 | HLA-DPA1 | ENSG00000231389.3 | 4.414E-10 | 0 | 3684 | gtex_brain_putamen_basal |
| rs73739675 | 6 | 33037866 | HLA-DPA1 | ENSG00000231389.3 | 4.414E-10 | 0 | 3683 | gtex_brain_putamen_basal |
| rs73739677 | 6 | 33037878 | HLA-DPA1 | ENSG00000231389.3 | 4.435E-10 | 0 | 3671 | gtex_brain_putamen_basal |
| rs72879614 | 6 | 33037891 | HLA-DPA1 | ENSG00000231389.3 | 4.435E-10 | 0 | 3658 | gtex_brain_putamen_basal |
| rs72879615 | 6 | 33037955 | HLA-DPA1 | ENSG00000231389.3 | 4.529E-9 | 0 | 3594 | gtex_brain_putamen_basal |
| rs72879616 | 6 | 33037957 | HLA-DPA1 | ENSG00000231389.3 | 4.529E-9 | 0 | 3592 | gtex_brain_putamen_basal |
| rs67325643 | 6 | 33037991 | HLA-DPA1 | ENSG00000231389.3 | 4.902E-11 | 0 | 3558 | gtex_brain_putamen_basal |
| rs67035222 | 6 | 33038024 | HLA-DPA1 | ENSG00000231389.3 | 1.108E-10 | 0 | 3525 | gtex_brain_putamen_basal |
| rs73739681 | 6 | 33038052 | HLA-DPA1 | ENSG00000231389.3 | 1.102E-10 | 0 | 3497 | gtex_brain_putamen_basal |
| rs73739682 | 6 | 33038053 | HLA-DPA1 | ENSG00000231389.3 | 1.102E-10 | 0 | 3496 | gtex_brain_putamen_basal |
| rs72879617 | 6 | 33038117 | HLA-DPA1 | ENSG00000231389.3 | 3.411E-9 | 0 | 3432 | gtex_brain_putamen_basal |
| rs73739684 | 6 | 33038134 | HLA-DPA1 | ENSG00000231389.3 | 3.411E-9 | 0 | 3415 | gtex_brain_putamen_basal |
| rs67408707 | 6 | 33038144 | HLA-DPA1 | ENSG00000231389.3 | 8.238E-11 | 0 | 3405 | gtex_brain_putamen_basal |
| rs56772034 | 6 | 33038167 | HLA-DPA1 | ENSG00000231389.3 | 8.238E-11 | 0 | 3382 | gtex_brain_putamen_basal |
| rs58510921 | 6 | 33038178 | HLA-DPA1 | ENSG00000231389.3 | 2.215E-10 | 0 | 3371 | gtex_brain_putamen_basal |
| rs59964828 | 6 | 33038187 | HLA-DPA1 | ENSG00000231389.3 | 2.215E-10 | 0 | 3362 | gtex_brain_putamen_basal |
| rs73739700 | 6 | 33038223 | HLA-DPA1 | ENSG00000231389.3 | 2.238E-10 | 0 | 3326 | gtex_brain_putamen_basal |
| rs59416939 | 6 | 33038229 | HLA-DPA1 | ENSG00000231389.3 | 2.238E-10 | 0 | 3320 | gtex_brain_putamen_basal |
| rs72879618 | 6 | 33038237 | HLA-DPA1 | ENSG00000231389.3 | 2.238E-10 | 0 | 3312 | gtex_brain_putamen_basal |
| rs67463587 | 6 | 33038322 | HLA-DPA1 | ENSG00000231389.3 | 1.141E-10 | 0 | 3227 | gtex_brain_putamen_basal |
| rs2301224 | 6 | 33038369 | HLA-DPA1 | ENSG00000231389.3 | 1.141E-10 | 0 | 3180 | gtex_brain_putamen_basal |
| rs2301222 | 6 | 33038548 | HLA-DPA1 | ENSG00000231389.3 | 1.154E-10 | 0 | 3001 | gtex_brain_putamen_basal |
| rs57389774 | 6 | 33038579 | HLA-DPA1 | ENSG00000231389.3 | 1.158E-10 | 0 | 2970 | gtex_brain_putamen_basal |
| rs2301221 | 6 | 33038597 | HLA-DPA1 | ENSG00000231389.3 | 1.159E-10 | 0 | 2952 | gtex_brain_putamen_basal |
| rs2301220 | 6 | 33038766 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2783 | gtex_brain_putamen_basal |
| rs67542233 | 6 | 33038802 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | 2747 | gtex_brain_putamen_basal |
| rs73400085 | 6 | 33038830 | HLA-DPA1 | ENSG00000231389.3 | 5.099E-10 | 0 | 2719 | gtex_brain_putamen_basal |
| rs28438582 | 6 | 33038850 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2699 | gtex_brain_putamen_basal |
| rs28414332 | 6 | 33038862 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2687 | gtex_brain_putamen_basal |
| rs59977910 | 6 | 33038979 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2570 | gtex_brain_putamen_basal |
| rs72879625 | 6 | 33038982 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | 2567 | gtex_brain_putamen_basal |
| rs57753382 | 6 | 33039180 | HLA-DPA1 | ENSG00000231389.3 | 5.091E-10 | 0 | 2369 | gtex_brain_putamen_basal |
| rs66977180 | 6 | 33039196 | HLA-DPA1 | ENSG00000231389.3 | 1.427E-8 | 0 | 2353 | gtex_brain_putamen_basal |
| rs28452918 | 6 | 33039295 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2254 | gtex_brain_putamen_basal |
| rs34624643 | 6 | 33039376 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2173 | gtex_brain_putamen_basal |
| rs35039691 | 6 | 33039405 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2144 | gtex_brain_putamen_basal |
| rs34083733 | 6 | 33039446 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2103 | gtex_brain_putamen_basal |
| rs13196639 | 6 | 33039484 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2065 | gtex_brain_putamen_basal |
| rs34197320 | 6 | 33039503 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 2046 | gtex_brain_putamen_basal |
| rs370671778 | 6 | 33039589 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1960 | gtex_brain_putamen_basal |
| rs35521473 | 6 | 33039606 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1943 | gtex_brain_putamen_basal |
| rs35979982 | 6 | 33039652 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | 1897 | gtex_brain_putamen_basal |
| rs113408492 | 6 | 33039697 | HLA-DPA1 | ENSG00000231389.3 | 1.417E-8 | 0 | 1852 | gtex_brain_putamen_basal |
| rs34780193 | 6 | 33039719 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1830 | gtex_brain_putamen_basal |
| rs13213165 | 6 | 33039729 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1820 | gtex_brain_putamen_basal |
| rs34507584 | 6 | 33039767 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1782 | gtex_brain_putamen_basal |
| rs36043556 | 6 | 33039837 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1712 | gtex_brain_putamen_basal |
| rs35769133 | 6 | 33039848 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1701 | gtex_brain_putamen_basal |
| rs72879690 | 6 | 33039855 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1694 | gtex_brain_putamen_basal |
| rs66640614 | 6 | 33039899 | HLA-DPA1 | ENSG00000231389.3 | 2.032E-9 | 0 | 1650 | gtex_brain_putamen_basal |
| rs72500560 | 6 | 33039927 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1622 | gtex_brain_putamen_basal |
| rs72500562 | 6 | 33039980 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 1569 | gtex_brain_putamen_basal |
| rs58129983 | 6 | 33040044 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | 1505 | gtex_brain_putamen_basal |
| rs58063871 | 6 | 33040478 | HLA-DPA1 | ENSG00000231389.3 | 6.324E-9 | 0 | 1071 | gtex_brain_putamen_basal |
| rs4640928 | 6 | 33040596 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 953 | gtex_brain_putamen_basal |
| rs6914348 | 6 | 33040654 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | 895 | gtex_brain_putamen_basal |
| rs6914849 | 6 | 33040715 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 834 | gtex_brain_putamen_basal |
| rs9380336 | 6 | 33040736 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 813 | gtex_brain_putamen_basal |
| rs6914995 | 6 | 33040744 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 805 | gtex_brain_putamen_basal |
| rs9380337 | 6 | 33040781 | HLA-DPA1 | ENSG00000231389.3 | 9.406E-9 | 0 | 768 | gtex_brain_putamen_basal |
| rs9380338 | 6 | 33040798 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 751 | gtex_brain_putamen_basal |
| rs9348904 | 6 | 33040835 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 714 | gtex_brain_putamen_basal |
| rs9380339 | 6 | 33040877 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 672 | gtex_brain_putamen_basal |
| rs1431399 | 6 | 33041034 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 515 | gtex_brain_putamen_basal |
| rs9357156 | 6 | 33041073 | HLA-DPA1 | ENSG00000231389.3 | 1.226E-8 | 0 | 476 | gtex_brain_putamen_basal |
| rs1431400 | 6 | 33041176 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 373 | gtex_brain_putamen_basal |
| rs1431401 | 6 | 33041186 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 363 | gtex_brain_putamen_basal |
| rs4247257 | 6 | 33041226 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | 323 | gtex_brain_putamen_basal |
| rs9469344 | 6 | 33042368 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -819 | gtex_brain_putamen_basal |
| rs9469345 | 6 | 33042406 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -857 | gtex_brain_putamen_basal |
| rs60349783 | 6 | 33042492 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -943 | gtex_brain_putamen_basal |
| rs987870 | 6 | 33042880 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -1331 | gtex_brain_putamen_basal |
| rs2071351 | 6 | 33043930 | HLA-DPA1 | ENSG00000231389.3 | 5.077E-10 | 0 | -2381 | gtex_brain_putamen_basal |
| rs2071352 | 6 | 33044188 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -2639 | gtex_brain_putamen_basal |
| rs2071353 | 6 | 33044257 | HLA-DPA1 | ENSG00000231389.3 | 4.814E-10 | 0 | -2708 | gtex_brain_putamen_basal |
| rs9469347 | 6 | 33044258 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -2709 | gtex_brain_putamen_basal |
| rs2071354 | 6 | 33044388 | HLA-DPA1 | ENSG00000231389.3 | 1.422E-8 | 0 | -2839 | gtex_brain_putamen_basal |
| rs6415133 | 6 | 33044987 | HLA-DPA1 | ENSG00000231389.3 | 5.624E-7 | 0 | -3438 | gtex_brain_putamen_basal |
| rs6457711 | 6 | 33045272 | HLA-DPA1 | ENSG00000231389.3 | 1.716E-7 | 0 | -3723 | gtex_brain_putamen_basal |
| rs17221059 | 6 | 33048348 | HLA-DPA1 | ENSG00000231389.3 | 1.712E-7 | 0 | -6799 | gtex_brain_putamen_basal |
| rs7770370 | 6 | 33048921 | HLA-DPA1 | ENSG00000231389.3 | 1.258E-8 | 0 | -7372 | gtex_brain_putamen_basal |
| rs7770501 | 6 | 33048937 | HLA-DPA1 | ENSG00000231389.3 | 1.934E-7 | 0 | -7388 | gtex_brain_putamen_basal |
| rs2567289 | 6 | 33049565 | HLA-DPA1 | ENSG00000231389.3 | 1.979E-7 | 0 | -8016 | gtex_brain_putamen_basal |
| rs9501257 | 6 | 33055355 | HLA-DPA1 | ENSG00000231389.3 | 2.016E-7 | 0 | -13806 | gtex_brain_putamen_basal |
| rs9501259 | 6 | 33055551 | HLA-DPA1 | ENSG00000231389.3 | 2.016E-7 | 0 | -14002 | gtex_brain_putamen_basal |
| rs60460211 | 6 | 33055720 | HLA-DPA1 | ENSG00000231389.3 | 2.016E-7 | 0 | -14171 | gtex_brain_putamen_basal |
| rs9296076 | 6 | 33056840 | HLA-DPA1 | ENSG00000231389.3 | 2.016E-7 | 0 | -15291 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| AADACL1 | 0.94 | 0.88 |
| RPH3A | 0.94 | 0.92 |
| REPS2 | 0.93 | 0.85 |
| MAP1A | 0.93 | 0.87 |
| ZNF365 | 0.92 | 0.90 |
| OXR1 | 0.92 | 0.81 |
| GABRA1 | 0.92 | 0.88 |
| TEF | 0.92 | 0.89 |
| IQSEC1 | 0.92 | 0.80 |
| KLF9 | 0.92 | 0.91 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| BCL7C | -0.59 | -0.75 |
| FADS2 | -0.56 | -0.51 |
| TRAF4 | -0.54 | -0.68 |
| RPL23A | -0.52 | -0.70 |
| C9orf46 | -0.52 | -0.65 |
| DYNLT1 | -0.52 | -0.76 |
| SH3BP2 | -0.52 | -0.63 |
| GTF3C6 | -0.52 | -0.61 |
| TUBB2B | -0.52 | -0.62 |
| SEMA4B | -0.52 | -0.50 |
Section III. Gene Ontology annotation
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|---|---|---|---|
| GO:0032395 | MHC class II receptor activity | NAS | 2461352 | |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0002504 | antigen processing and presentation of peptide or polysaccharide antigen via MHC class II | IEA | - | |
| GO:0006955 | immune response | NAS | 2461352 | |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0005886 | plasma membrane | EXP | 11048639 |11827988 |15489916 |17652306 | |
| GO:0005887 | integral to plasma membrane | NAS | 2461352 | |
| GO:0042613 | MHC class II protein complex | IEA | - |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KEGG CELL ADHESION MOLECULES CAMS | 134 | 93 | All SZGR 2.0 genes in this pathway |
| KEGG ANTIGEN PROCESSING AND PRESENTATION | 89 | 65 | All SZGR 2.0 genes in this pathway |
| KEGG INTESTINAL IMMUNE NETWORK FOR IGA PRODUCTION | 48 | 36 | All SZGR 2.0 genes in this pathway |
| KEGG TYPE I DIABETES MELLITUS | 44 | 38 | All SZGR 2.0 genes in this pathway |
| KEGG LEISHMANIA INFECTION | 72 | 56 | All SZGR 2.0 genes in this pathway |
| KEGG ASTHMA | 30 | 25 | All SZGR 2.0 genes in this pathway |
| KEGG AUTOIMMUNE THYROID DISEASE | 53 | 49 | All SZGR 2.0 genes in this pathway |
| KEGG SYSTEMIC LUPUS ERYTHEMATOSUS | 140 | 100 | All SZGR 2.0 genes in this pathway |
| KEGG ALLOGRAFT REJECTION | 38 | 34 | All SZGR 2.0 genes in this pathway |
| KEGG GRAFT VERSUS HOST DISEASE | 42 | 31 | All SZGR 2.0 genes in this pathway |
| KEGG VIRAL MYOCARDITIS | 73 | 58 | All SZGR 2.0 genes in this pathway |
| REACTOME MHC CLASS II ANTIGEN PRESENTATION | 91 | 61 | All SZGR 2.0 genes in this pathway |
| REACTOME TCR SIGNALING | 54 | 46 | All SZGR 2.0 genes in this pathway |
| REACTOME DOWNSTREAM TCR SIGNALING | 37 | 32 | All SZGR 2.0 genes in this pathway |
| REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | 16 | 15 | All SZGR 2.0 genes in this pathway |
| REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | 14 | 14 | All SZGR 2.0 genes in this pathway |
| REACTOME GENERATION OF SECOND MESSENGER MOLECULES | 27 | 25 | All SZGR 2.0 genes in this pathway |
| REACTOME PD1 SIGNALING | 18 | 14 | All SZGR 2.0 genes in this pathway |
| REACTOME COSTIMULATION BY THE CD28 FAMILY | 63 | 48 | All SZGR 2.0 genes in this pathway |
| REACTOME INTERFERON GAMMA SIGNALING | 63 | 48 | All SZGR 2.0 genes in this pathway |
| REACTOME INTERFERON SIGNALING | 159 | 116 | All SZGR 2.0 genes in this pathway |
| REACTOME IMMUNE SYSTEM | 933 | 616 | All SZGR 2.0 genes in this pathway |
| REACTOME ADAPTIVE IMMUNE SYSTEM | 539 | 350 | All SZGR 2.0 genes in this pathway |
| REACTOME CYTOKINE SIGNALING IN IMMUNE SYSTEM | 270 | 204 | All SZGR 2.0 genes in this pathway |
| ONKEN UVEAL MELANOMA UP | 783 | 507 | All SZGR 2.0 genes in this pathway |
| SCHUETZ BREAST CANCER DUCTAL INVASIVE UP | 351 | 230 | All SZGR 2.0 genes in this pathway |
| GAZDA DIAMOND BLACKFAN ANEMIA PROGENITOR UP | 39 | 25 | All SZGR 2.0 genes in this pathway |
| GARY CD5 TARGETS DN | 431 | 263 | All SZGR 2.0 genes in this pathway |
| THUM SYSTOLIC HEART FAILURE UP | 423 | 283 | All SZGR 2.0 genes in this pathway |
| CASORELLI ACUTE PROMYELOCYTIC LEUKEMIA DN | 663 | 425 | All SZGR 2.0 genes in this pathway |
| DEURIG T CELL PROLYMPHOCYTIC LEUKEMIA DN | 320 | 184 | All SZGR 2.0 genes in this pathway |
| GRAHAM CML QUIESCENT VS NORMAL QUIESCENT DN | 47 | 32 | All SZGR 2.0 genes in this pathway |
| GRAHAM CML DIVIDING VS NORMAL QUIESCENT DN | 95 | 57 | All SZGR 2.0 genes in this pathway |
| RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED DN | 805 | 505 | All SZGR 2.0 genes in this pathway |
| RODRIGUES THYROID CARCINOMA ANAPLASTIC DN | 537 | 339 | All SZGR 2.0 genes in this pathway |
| GOZGIT ESR1 TARGETS DN | 781 | 465 | All SZGR 2.0 genes in this pathway |
| LUI THYROID CANCER CLUSTER 4 | 16 | 9 | All SZGR 2.0 genes in this pathway |
| TSUNODA CISPLATIN RESISTANCE DN | 51 | 38 | All SZGR 2.0 genes in this pathway |
| PUJANA ATM PCC NETWORK | 1442 | 892 | All SZGR 2.0 genes in this pathway |
| BUYTAERT PHOTODYNAMIC THERAPY STRESS DN | 637 | 377 | All SZGR 2.0 genes in this pathway |
| ROSS ACUTE MYELOID LEUKEMIA CBF | 82 | 57 | All SZGR 2.0 genes in this pathway |
| WIELAND UP BY HBV INFECTION | 101 | 66 | All SZGR 2.0 genes in this pathway |
| SANA RESPONSE TO IFNG UP | 78 | 50 | All SZGR 2.0 genes in this pathway |
| FLECHNER BIOPSY KIDNEY TRANSPLANT OK VS DONOR UP | 555 | 346 | All SZGR 2.0 genes in this pathway |
| NEMETH INFLAMMATORY RESPONSE LPS DN | 32 | 25 | All SZGR 2.0 genes in this pathway |
| LENAOUR DENDRITIC CELL MATURATION UP | 114 | 84 | All SZGR 2.0 genes in this pathway |
| ALCALAY AML BY NPM1 LOCALIZATION DN | 184 | 132 | All SZGR 2.0 genes in this pathway |
| VERHAAK AML WITH NPM1 MUTATED DN | 246 | 180 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE INCIPIENT UP | 390 | 242 | All SZGR 2.0 genes in this pathway |
| BLALOCK ALZHEIMERS DISEASE UP | 1691 | 1088 | All SZGR 2.0 genes in this pathway |
| MCLACHLAN DENTAL CARIES DN | 245 | 144 | All SZGR 2.0 genes in this pathway |
| RODWELL AGING KIDNEY UP | 487 | 303 | All SZGR 2.0 genes in this pathway |
| MCLACHLAN DENTAL CARIES UP | 253 | 147 | All SZGR 2.0 genes in this pathway |
| HELLER SILENCED BY METHYLATION UP | 282 | 183 | All SZGR 2.0 genes in this pathway |
| HELLER HDAC TARGETS UP | 317 | 208 | All SZGR 2.0 genes in this pathway |
| HELLER HDAC TARGETS SILENCED BY METHYLATION UP | 461 | 298 | All SZGR 2.0 genes in this pathway |
| RIZKI TUMOR INVASIVENESS 3D UP | 210 | 124 | All SZGR 2.0 genes in this pathway |
| RIGGI EWING SARCOMA PROGENITOR DN | 191 | 123 | All SZGR 2.0 genes in this pathway |
| SMID BREAST CANCER NORMAL LIKE UP | 476 | 285 | All SZGR 2.0 genes in this pathway |
| GAURNIER PSMD4 TARGETS | 73 | 55 | All SZGR 2.0 genes in this pathway |
| BOQUEST STEM CELL DN | 216 | 143 | All SZGR 2.0 genes in this pathway |
| BOQUEST STEM CELL CULTURED VS FRESH UP | 425 | 298 | All SZGR 2.0 genes in this pathway |
| WEST ADRENOCORTICAL CARCINOMA VS ADENOMA DN | 24 | 18 | All SZGR 2.0 genes in this pathway |
| BEIER GLIOMA STEM CELL DN | 66 | 42 | All SZGR 2.0 genes in this pathway |
| HSIAO HOUSEKEEPING GENES | 389 | 245 | All SZGR 2.0 genes in this pathway |
| VALK AML CLUSTER 6 | 33 | 22 | All SZGR 2.0 genes in this pathway |
| BOYAULT LIVER CANCER SUBCLASS G5 DN | 27 | 17 | All SZGR 2.0 genes in this pathway |
| BUDHU LIVER CANCER METASTASIS UP | 10 | 7 | All SZGR 2.0 genes in this pathway |
| YAGI AML WITH T 8 21 TRANSLOCATION | 368 | 247 | All SZGR 2.0 genes in this pathway |
| GUTIERREZ WALDENSTROEMS MACROGLOBULINEMIA 2 | 13 | 9 | All SZGR 2.0 genes in this pathway |
| NAKAYAMA SOFT TISSUE TUMORS PCA1 UP | 76 | 46 | All SZGR 2.0 genes in this pathway |
| JOHNSTONE PARVB TARGETS 2 UP | 140 | 94 | All SZGR 2.0 genes in this pathway |
| JOHNSTONE PARVB TARGETS 3 UP | 430 | 288 | All SZGR 2.0 genes in this pathway |
| BRUINS UVC RESPONSE LATE | 1137 | 655 | All SZGR 2.0 genes in this pathway |
| SMIRNOV RESPONSE TO IR 2HR UP | 53 | 33 | All SZGR 2.0 genes in this pathway |