Gene Page: KRTAP19-6
Summary ?
| GeneID | 337973 |
| Symbol | KRTAP19-6 |
| Synonyms | KAP19.6 |
| Description | keratin associated protein 19-6 |
| Reference | HGNC:HGNC:18941|Ensembl:ENSG00000186925|HPRD:11210|Vega:OTTHUMG00000057779 |
| Gene type | protein-coding |
| Map location | 21q22.1 |
| Pascal p-value | 0.038 |
| eGene | Myers' cis & trans |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs1507405 | chr21 | 32048381 | KRTAP19-6 | 337973 | 0.13 | cis | ||
| rs2832978 | chr21 | 32050286 | KRTAP19-6 | 337973 | 0.1 | cis | ||
| rs7277024 | chr21 | 32079058 | KRTAP19-6 | 337973 | 0.09 | cis | ||
| rs2833016 | chr21 | 32086253 | KRTAP19-6 | 337973 | 0.05 | cis | ||
| rs9981669 | chr21 | 32086759 | KRTAP19-6 | 337973 | 0.06 | cis | ||
| rs10777641 | chr12 | 95252883 | KRTAP19-6 | 337973 | 0.12 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY | 1839 | 928 | All SZGR 2.0 genes in this pathway |