Summary ?
GeneID3887
SymbolKRT81
SynonymsHB1|Hb-1|KRTHB1|MLN137|ghHkb1|hHAKB2-1
Descriptionkeratin 81
ReferenceMIM:602153|HGNC:HGNC:6458|Ensembl:ENSG00000205426|HPRD:03691|Vega:OTTHUMG00000167574
Gene typeprotein-coding
Map location12q13
Pascal p-value0.032
eGeneAnterior cingulate cortex BA24
Cortex
Frontal Cortex BA9
Meta

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs128323641252699213KRT81ENSG00000205426.68.935E-70.02-13895gtex_brain_ba24
rs11370131252702633KRT81ENSG00000205426.61.147E-60.02-17315gtex_brain_ba24
rs28576731252707973KRT81ENSG00000205426.61.855E-60.02-22655gtex_brain_ba24
rs112858581252708090KRT81ENSG00000205426.61.858E-60.02-22772gtex_brain_ba24
rs28524691252709429KRT81ENSG00000205426.61.872E-60.02-24111gtex_brain_ba24
rs28524681252709880KRT81ENSG00000205426.61.876E-60.02-24562gtex_brain_ba24
rs22484731252709883KRT81ENSG00000205426.61.876E-60.02-24565gtex_brain_ba24
rs116113301252710037KRT81ENSG00000205426.61.877E-60.02-24719gtex_brain_ba24
rs561184661252710102KRT81ENSG00000205426.61.877E-60.02-24784gtex_brain_ba24
rs557222661252710198KRT81ENSG00000205426.61.877E-60.02-24880gtex_brain_ba24
rs22702671252710246KRT81ENSG00000205426.61.877E-60.02-24928gtex_brain_ba24
rs22572861252710309KRT81ENSG00000205426.61.877E-60.02-24991gtex_brain_ba24
rs28576691252710715KRT81ENSG00000205426.61.877E-60.02-25397gtex_brain_ba24
rs28524631252710897KRT81ENSG00000205426.61.878E-60.02-25579gtex_brain_ba24
rs28576681252710898KRT81ENSG00000205426.61.877E-60.02-25580gtex_brain_ba24
rs28524621252710913KRT81ENSG00000205426.61.877E-60.02-25595gtex_brain_ba24
rs28524601252711416KRT81ENSG00000205426.61.877E-60.02-26098gtex_brain_ba24
rs28576671252711549KRT81ENSG00000205426.62.46E-60.02-26231gtex_brain_ba24
rs28576661252711624KRT81ENSG00000205426.61.858E-60.02-26306gtex_brain_ba24
rs28524591252711776KRT81ENSG00000205426.61.843E-60.02-26458gtex_brain_ba24
rs28524581252712249KRT81ENSG00000205426.61.794E-60.02-26931gtex_brain_ba24
rs9988201252712746KRT81ENSG00000205426.62.945E-60.02-27428gtex_brain_ba24
rs9988211252712813KRT81ENSG00000205426.62.945E-60.02-27495gtex_brain_ba24
rs21875121252712898KRT81ENSG00000205426.62.945E-60.02-27580gtex_brain_ba24
rs28576621252713417KRT81ENSG00000205426.62.945E-60.02-28099gtex_brain_ba24
rs42378971252713697KRT81ENSG00000205426.62.945E-60.02-28379gtex_brain_ba24
rs42378981252713781KRT81ENSG00000205426.62.945E-60.02-28463gtex_brain_ba24
rs28524671252713803KRT81ENSG00000205426.62.945E-60.02-28485gtex_brain_ba24
rs28524661252714097KRT81ENSG00000205426.62.945E-60.02-28779gtex_brain_ba24
rs28524651252714138KRT81ENSG00000205426.62.945E-60.02-28820gtex_brain_ba24
rs15400951252715363KRT81ENSG00000205426.62.945E-60.02-30045gtex_brain_ba24
rs15400931252715876KRT81ENSG00000205426.62.945E-60.02-30558gtex_brain_ba24
rs176564431252716522KRT81ENSG00000205426.62.945E-60.02-31204gtex_brain_ba24
rs99196751252717622KRT81ENSG00000205426.62.945E-60.02-32304gtex_brain_ba24
rs71332841252717686KRT81ENSG00000205426.62.945E-60.02-32368gtex_brain_ba24
rs15735141252719253KRT81ENSG00000205426.62.945E-60.02-33935gtex_brain_ba24

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
FBN10.770.73
EIF4G10.760.83
MYH100.750.81
TMEM1310.750.83
LARP4B0.740.78
FHOD30.740.82
SEC23IP0.730.78
DNAJC130.730.81
HGSNAT0.730.80
DYNC1H10.730.76
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
AF347015.31-0.65-0.71
AF347015.33-0.64-0.68
MT-CO2-0.64-0.71
AF347015.27-0.63-0.69
AF347015.8-0.63-0.69
AF347015.2-0.63-0.69
MT-CYB-0.62-0.66
HIGD1B-0.62-0.69
FXYD1-0.62-0.65
AF347015.21-0.61-0.70

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
SENESE HDAC1 AND HDAC2 TARGETS DN 232139All SZGR 2.0 genes in this pathway
SENESE HDAC2 TARGETS DN 13377All SZGR 2.0 genes in this pathway
PROVENZANI METASTASIS DN 13694All SZGR 2.0 genes in this pathway
PACHER TARGETS OF IGF1 AND IGF2 UP 3527All SZGR 2.0 genes in this pathway
MUELLER METHYLATED IN GLIOBLASTOMA 4022All SZGR 2.0 genes in this pathway
LIN SILENCED BY TUMOR MICROENVIRONMENT 10873All SZGR 2.0 genes in this pathway
ONDER CDH1 TARGETS 2 DN 464276All SZGR 2.0 genes in this pathway
BYSTRYKH HEMATOPOIESIS STEM CELL AND BRAIN QTL TRANS 185114All SZGR 2.0 genes in this pathway
FRASOR RESPONSE TO ESTRADIOL DN 8252All SZGR 2.0 genes in this pathway
LEI MYB TARGETS 318215All SZGR 2.0 genes in this pathway
YEGNASUBRAMANIAN PROSTATE CANCER 12860All SZGR 2.0 genes in this pathway
MARTINEZ RB1 TARGETS DN 543317All SZGR 2.0 genes in this pathway
MARTINEZ TP53 TARGETS DN 593372All SZGR 2.0 genes in this pathway
MARTINEZ RB1 AND TP53 TARGETS DN 591366All SZGR 2.0 genes in this pathway
MASSARWEH TAMOXIFEN RESISTANCE UP 578341All SZGR 2.0 genes in this pathway
HUANG FOXA2 TARGETS DN 3621All SZGR 2.0 genes in this pathway
ACEVEDO METHYLATED IN LIVER CANCER DN 940425All SZGR 2.0 genes in this pathway
SMID BREAST CANCER RELAPSE IN BONE DN 315197All SZGR 2.0 genes in this pathway
SMID BREAST CANCER LUMINAL B DN 564326All SZGR 2.0 genes in this pathway
SMID BREAST CANCER BASAL UP 648398All SZGR 2.0 genes in this pathway
HUPER BREAST BASAL VS LUMINAL DN 5944All SZGR 2.0 genes in this pathway
SWEET LUNG CANCER KRAS UP 491316All SZGR 2.0 genes in this pathway
HAN SATB1 TARGETS UP 395249All SZGR 2.0 genes in this pathway
HAN SATB1 TARGETS DN 442275All SZGR 2.0 genes in this pathway
SHEDDEN LUNG CANCER GOOD SURVIVAL A12 317177All SZGR 2.0 genes in this pathway
TAVAZOIE METASTASIS 10868All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 1 UP 12561All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 2 UP 5431All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 3 UP 17097All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 4 UP 11264All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 5 UP 128All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 6 UP 14081All SZGR 2.0 genes in this pathway
FIGUEROA AML METHYLATION CLUSTER 7 UP 11868All SZGR 2.0 genes in this pathway
PEDERSEN METASTASIS BY ERBB2 ISOFORM 1 4633All SZGR 2.0 genes in this pathway
ZWANG EGF INTERVAL UP 10546All SZGR 2.0 genes in this pathway