Gene Page: ASMT
Summary ?
GeneID | 438 |
Symbol | ASMT |
Synonyms | ASMTY|HIOMT|HIOMTY |
Description | acetylserotonin O-methyltransferase |
Reference | MIM:300015|MIM:402500|HGNC:HGNC:750|Ensembl:ENSG00000196433|HPRD:02058|Vega:OTTHUMG00000021065 |
Gene type | protein-coding |
Map location | Xp22.3 or Yp11.3 |
eGene | Myers' cis & trans |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 2 |
Section I. Genetics and epigenetics annotation
eQTL annotation
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs6688662 | chr1 | 76842132 | ASMT | 438 | 0.19 | trans | ||
rs512189 | chr1 | 182632586 | ASMT | 438 | 0.15 | trans | ||
rs6666913 | chr1 | 237092144 | ASMT | 438 | 0 | trans | ||
rs16865228 | chr2 | 6629622 | ASMT | 438 | 0.1 | trans | ||
rs16865230 | chr2 | 6630187 | ASMT | 438 | 0.1 | trans | ||
rs11691188 | chr2 | 6631799 | ASMT | 438 | 0.1 | trans | ||
rs10209546 | chr2 | 53408320 | ASMT | 438 | 0.04 | trans | ||
rs13403353 | chr2 | 144067716 | ASMT | 438 | 0 | trans | ||
rs10195263 | chr2 | 151725791 | ASMT | 438 | 0.01 | trans | ||
rs13413644 | chr2 | 189475948 | ASMT | 438 | 0.19 | trans | ||
rs9855575 | chr3 | 15514062 | ASMT | 438 | 0.14 | trans | ||
rs6548978 | chr3 | 68139529 | ASMT | 438 | 0.09 | trans | ||
rs17011179 | chr3 | 73501887 | ASMT | 438 | 0.18 | trans | ||
rs7609917 | chr3 | 76094301 | ASMT | 438 | 8.87E-5 | trans | ||
rs2324466 | chr3 | 76100753 | ASMT | 438 | 8.242E-7 | trans | ||
rs17013713 | chr3 | 76105150 | ASMT | 438 | 4.063E-6 | trans | ||
rs17013722 | chr3 | 76107656 | ASMT | 438 | 8.242E-7 | trans | ||
rs17013724 | chr3 | 76107684 | ASMT | 438 | 8.242E-7 | trans | ||
rs16831155 | chr3 | 173574763 | ASMT | 438 | 0.1 | trans | ||
rs11734196 | chr4 | 102796071 | ASMT | 438 | 0.04 | trans | ||
rs10212684 | chr4 | 102822506 | ASMT | 438 | 0.01 | trans | ||
rs9986296 | chr5 | 3199318 | ASMT | 438 | 0.02 | trans | ||
rs2895773 | chr5 | 148114635 | ASMT | 438 | 0 | trans | ||
rs10059267 | chr5 | 168676624 | ASMT | 438 | 0.17 | trans | ||
rs10078402 | chr5 | 168678851 | ASMT | 438 | 0.17 | trans | ||
rs2281351 | chr6 | 187343 | ASMT | 438 | 0.12 | trans | ||
rs7740062 | chr6 | 27705597 | ASMT | 438 | 0.15 | trans | ||
rs200470 | chr6 | 27762186 | ASMT | 438 | 0.08 | trans | ||
rs201005 | chr6 | 27804159 | ASMT | 438 | 0.13 | trans | ||
rs200955 | chr6 | 27839311 | ASMT | 438 | 0.15 | trans | ||
rs200959 | chr6 | 27842046 | ASMT | 438 | 0.15 | trans | ||
rs839777 | chr6 | 27909656 | ASMT | 438 | 0.1 | trans | ||
rs149898 | chr6 | 27958071 | ASMT | 438 | 0.1 | trans | ||
rs156742 | chr6 | 27963191 | ASMT | 438 | 0.1 | trans | ||
rs175955 | chr6 | 28059733 | ASMT | 438 | 0.1 | trans | ||
rs1225593 | chr6 | 28150518 | ASMT | 438 | 0.1 | trans | ||
rs195749 | chr6 | 37253745 | ASMT | 438 | 0.07 | trans | ||
rs16896683 | chr6 | 43687846 | ASMT | 438 | 0.07 | trans | ||
rs16875134 | chr6 | 85489519 | ASMT | 438 | 0.05 | trans | ||
rs16875178 | chr6 | 85516099 | ASMT | 438 | 0.08 | trans | ||
rs7808764 | chr7 | 10297264 | ASMT | 438 | 0.11 | trans | ||
rs17145334 | chr7 | 21808409 | ASMT | 438 | 0.18 | trans | ||
rs992435 | chr7 | 97050802 | ASMT | 438 | 0.08 | trans | ||
rs8190856 | chr8 | 18079123 | ASMT | 438 | 0.1 | trans | ||
rs16920368 | chr8 | 55392852 | ASMT | 438 | 0.08 | trans | ||
rs16927318 | chr8 | 62365911 | ASMT | 438 | 0.01 | trans | ||
rs348150 | chr8 | 73371619 | ASMT | 438 | 0.04 | trans | ||
rs16938220 | chr8 | 73377940 | ASMT | 438 | 0.03 | trans | ||
rs4545144 | chr8 | 139689307 | ASMT | 438 | 0.16 | trans | ||
rs10815658 | chr9 | 7709422 | ASMT | 438 | 0.02 | trans | ||
rs17775722 | chr9 | 26199256 | ASMT | 438 | 0.13 | trans | ||
rs180038 | chr9 | 101514415 | ASMT | 438 | 0.01 | trans | ||
rs4742740 | chr9 | 101524552 | ASMT | 438 | 0.01 | trans | ||
rs4743277 | chr9 | 101557528 | ASMT | 438 | 0.02 | trans | ||
rs11190152 | chr10 | 101325914 | ASMT | 438 | 0.17 | trans | ||
rs2069410 | chr12 | 56364644 | ASMT | 438 | 1.604E-4 | trans | ||
rs7979024 | chr12 | 84506011 | ASMT | 438 | 0.06 | trans | ||
rs11105124 | chr12 | 89375908 | ASMT | 438 | 0.05 | trans | ||
rs17834315 | chr13 | 37991091 | ASMT | 438 | 0 | trans | ||
rs9542625 | chr13 | 71811344 | ASMT | 438 | 0.13 | trans | ||
rs17091014 | chr14 | 56562713 | ASMT | 438 | 0.07 | trans | ||
rs1743505 | chr14 | 96143407 | ASMT | 438 | 0.16 | trans | ||
rs17142983 | chr16 | 7294508 | ASMT | 438 | 0.11 | trans | ||
rs6499075 | chr16 | 66387395 | ASMT | 438 | 0.13 | trans | ||
rs8051077 | chr16 | 75036432 | ASMT | 438 | 0.18 | trans | ||
rs17798004 | chr18 | 70665382 | ASMT | 438 | 0.11 | trans | ||
rs17736134 | chr18 | 70665805 | ASMT | 438 | 0.09 | trans | ||
rs2469060 | chr18 | 70673106 | ASMT | 438 | 0.09 | trans | ||
rs2469009 | chr18 | 70713334 | ASMT | 438 | 0.16 | trans | ||
rs6514759 | 0 | ASMT | 438 | 0.01 | trans | |||
rs409642 | chr20 | 54250273 | ASMT | 438 | 0.02 | trans | ||
rs7290732 | chr22 | 46691902 | ASMT | 438 | 0.16 | trans | ||
rs5920627 | chrX | 97385064 | ASMT | 438 | 0.03 | trans | ||
snp_a-2027825 | 0 | ASMT | 438 | 0.02 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)

Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section III. Gene Ontology annotation
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|---|---|---|---|
GO:0005184 | neuropeptide hormone activity | IEA | axon, Synap, Brain, Neurotransmitter (GO term level: 6) | - |
GO:0017096 | acetylserotonin O-methyltransferase activity | IEA | serotonin (GO term level: 7) | - |
GO:0016740 | transferase activity | IEA | - | |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
GO:0006412 | translation | TAS | 8397829 | |
GO:0030187 | melatonin biosynthetic process | IEA | - | |
GO:0048511 | rhythmic process | IEA | - |
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
KEGG TRYPTOPHAN METABOLISM | 40 | 33 | All SZGR 2.0 genes in this pathway |
TARTE PLASMA CELL VS PLASMABLAST UP | 398 | 262 | All SZGR 2.0 genes in this pathway |
ACEVEDO METHYLATED IN LIVER CANCER DN | 940 | 425 | All SZGR 2.0 genes in this pathway |
TAVAZOIE METASTASIS | 108 | 68 | All SZGR 2.0 genes in this pathway |