Gene Page: FLJ12825
Summary ?
| GeneID | 440101 |
| Symbol | FLJ12825 |
| Synonyms | - |
| Description | uncharacterized LOC440101 |
| Reference | Ensembl:ENSG00000248265| |
| Gene type | ncRNA |
| Map location | 12q13.13 |
| Pascal p-value | 0.606 |
| DMG | 1 (# studies) |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| DMG:Wockner_2014 | Genome-wide DNA methylation analysis | This dataset includes 4641 differentially methylated probes corresponding to 2929 unique genes between schizophrenia patients (n=24) and controls (n=24). | 3 |
Section I. Genetics and epigenetics annotation
Differentially methylated gene
| Probe | Chromosome | Position | Nearest gene | P (dis) | Beta (dis) | FDR (dis) | Study |
|---|---|---|---|---|---|---|---|
| cg25828185 | 12 | 54455656 | FLJ12825 | 3.22E-5 | -0.334 | 0.019 | DMG:Wockner_2014 |
| cg08455772 | 12 | 54452069 | FLJ12825 | 5.89E-5 | -0.319 | 0.023 | DMG:Wockner_2014 |
| cg23197405 | 12 | 54451938 | FLJ12825 | 9.51E-5 | -0.423 | 0.027 | DMG:Wockner_2014 |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| MOHANKUMAR TLX1 TARGETS DN | 193 | 112 | All SZGR 2.0 genes in this pathway |