Summary ?
Descriptiontranscription elongation factor B subunit 3B
Gene typeprotein-coding
Map location18q21.1
Pascal p-value2.654E-4

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions

Section IV. Protein-protein interaction annotation

InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
C19orf50FLJ25480 | MGC2749 | MST096 | MSTP096chromosome 19 open reading frame 50Two-hybridBioGRID16189514 
CALCOCO2MGC17318 | NDP52calcium binding and coiled-coil domain 2Two-hybridBioGRID16189514 
CBX5HP1 | HP1Achromobox homolog 5 (HP1 alpha homolog, Drosophila)Two-hybridBioGRID16189514 
CEP70BITE | FLJ13036centrosomal protein 70kDaTwo-hybridBioGRID16189514 
DVL2-dishevelled, dsh homolog 2 (Drosophila)Two-hybridBioGRID16189514 
KRTAP4-12KAP4.12 | KRTAP4.12keratin associated protein 4-12Two-hybridBioGRID16189514 
SOHLH2FLJ20449 | TEB1 | bA121N13.2spermatogenesis and oogenesis specific basic helix-loop-helix 2Two-hybridBioGRID16189514 
TRAF2MGC:45012 | TRAP | TRAP3TNF receptor-associated factor 2Two-hybridBioGRID16189514 
TRIM37KIAA0898 | MUL | POB1 | TEF3tripartite motif-containing 37Two-hybridBioGRID16189514 
ZBTB43ZBTB22B | ZNF-X | ZNF297Bzinc finger and BTB domain containing 43Two-hybridBioGRID16189514 
ZNF165LD65 | ZSCAN7zinc finger protein 165Two-hybridBioGRID16189514 

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
ZHOU INFLAMMATORY RESPONSE LIVE UP 485293All SZGR 2.0 genes in this pathway
WEBER METHYLATED ICP IN FIBROBLAST 229All SZGR 2.0 genes in this pathway
WEBER METHYLATED ICP IN SPERM DN 145All SZGR 2.0 genes in this pathway
MARTENS TRETINOIN RESPONSE UP 857456All SZGR 2.0 genes in this pathway
ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY 1839928All SZGR 2.0 genes in this pathway