Gene Page: PARP11
Summary ?
| GeneID | 57097 |
| Symbol | PARP11 |
| Synonyms | ARTD11|C12orf6|MIB006 |
| Description | poly(ADP-ribose) polymerase family member 11 |
| Reference | MIM:616706|HGNC:HGNC:1186|Ensembl:ENSG00000111224|HPRD:15101|Vega:OTTHUMG00000156442 |
| Gene type | protein-coding |
| Map location | 12p13.3 |
| Pascal p-value | 0.01 |
| eGene | Myers' cis & trans Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs3217906 | chr12 | 4405803 | PARP11 | 57097 | 0.11 | cis | ||
| rs3217933 | chr12 | 4412999 | PARP11 | 57097 | 0.07 | cis | ||
| rs2277991 | chr19 | 7755715 | PARP11 | 57097 | 0.19 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KINSEY TARGETS OF EWSR1 FLII FUSION UP | 1278 | 748 | All SZGR 2.0 genes in this pathway |
| TCGA GLIOBLASTOMA COPY NUMBER UP | 75 | 36 | All SZGR 2.0 genes in this pathway |
| ZHENG BOUND BY FOXP3 | 491 | 310 | All SZGR 2.0 genes in this pathway |
| PURBEY TARGETS OF CTBP1 NOT SATB1 DN | 448 | 282 | All SZGR 2.0 genes in this pathway |