Gene Page: ZNF471
Summary ?
| GeneID | 57573 |
| Symbol | ZNF471 |
| Synonyms | ERP1|Z1971 |
| Description | zinc finger protein 471 |
| Reference | HGNC:HGNC:23226|HPRD:15797| |
| Gene type | protein-coding |
| Map location | 19q13.43 |
| Pascal p-value | 0.002 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Nucleus accumbens basal ganglia Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs73064080 | 19 | 56981715 | ZNF471 | ENSG00000196263.3 | 3.982E-7 | 0.02 | -37497 | gtex_brain_ba24 |
| rs62121654 | 19 | 56990010 | ZNF471 | ENSG00000196263.3 | 1.16E-6 | 0.02 | -29202 | gtex_brain_ba24 |
| rs7249981 | 19 | 57007991 | ZNF471 | ENSG00000196263.3 | 1.517E-7 | 0.02 | -11221 | gtex_brain_ba24 |
| rs10406535 | 19 | 57011065 | ZNF471 | ENSG00000196263.3 | 5.618E-7 | 0.02 | -8147 | gtex_brain_ba24 |
| rs10406985 | 19 | 57011285 | ZNF471 | ENSG00000196263.3 | 5.662E-7 | 0.02 | -7927 | gtex_brain_ba24 |
| rs10406513 | 19 | 57012918 | ZNF471 | ENSG00000196263.3 | 6.104E-7 | 0.02 | -6294 | gtex_brain_ba24 |
| rs17273442 | 19 | 57022744 | ZNF471 | ENSG00000196263.3 | 1.031E-6 | 0.02 | 3532 | gtex_brain_ba24 |
| rs12984487 | 19 | 57026539 | ZNF471 | ENSG00000196263.3 | 1.17E-6 | 0.02 | 7327 | gtex_brain_ba24 |
| rs10419939 | 19 | 57027606 | ZNF471 | ENSG00000196263.3 | 3.833E-7 | 0.02 | 8394 | gtex_brain_ba24 |
| rs17144 | 19 | 57030405 | ZNF471 | ENSG00000196263.3 | 1.026E-6 | 0.02 | 11193 | gtex_brain_ba24 |
| rs8106788 | 19 | 57033224 | ZNF471 | ENSG00000196263.3 | 1.131E-6 | 0.02 | 14012 | gtex_brain_ba24 |
| rs3752176 | 19 | 57036653 | ZNF471 | ENSG00000196263.3 | 1.131E-6 | 0.02 | 17441 | gtex_brain_ba24 |
| rs960995 | 19 | 57039169 | ZNF471 | ENSG00000196263.3 | 1.131E-6 | 0.02 | 19957 | gtex_brain_ba24 |
| rs958338 | 19 | 57039699 | ZNF471 | ENSG00000196263.3 | 1.131E-6 | 0.02 | 20487 | gtex_brain_ba24 |
| rs146885132 | 19 | 57040739 | ZNF471 | ENSG00000196263.3 | 1.129E-6 | 0.02 | 21527 | gtex_brain_ba24 |
| rs10415223 | 19 | 57042178 | ZNF471 | ENSG00000196263.3 | 1.134E-6 | 0.02 | 22966 | gtex_brain_ba24 |
| rs2058132 | 19 | 57042407 | ZNF471 | ENSG00000196263.3 | 1.135E-6 | 0.02 | 23195 | gtex_brain_ba24 |
| rs10416884 | 19 | 57042744 | ZNF471 | ENSG00000196263.3 | 1.135E-6 | 0.02 | 23532 | gtex_brain_ba24 |
| rs35780595 | 19 | 57044123 | ZNF471 | ENSG00000196263.3 | 1.14E-6 | 0.02 | 24911 | gtex_brain_ba24 |
| rs56052104 | 19 | 57044342 | ZNF471 | ENSG00000196263.3 | 1.197E-6 | 0.02 | 25130 | gtex_brain_ba24 |
| rs993510 | 19 | 57046781 | ZNF471 | ENSG00000196263.3 | 1.144E-6 | 0.02 | 27569 | gtex_brain_ba24 |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| REACTOME GENERIC TRANSCRIPTION PATHWAY | 352 | 181 | All SZGR 2.0 genes in this pathway |
| ACEVEDO LIVER CANCER WITH H3K27ME3 UP | 295 | 149 | All SZGR 2.0 genes in this pathway |