Gene Page: ZNF71
Summary ?
| GeneID | 58491 |
| Symbol | ZNF71 |
| Synonyms | EZFIT |
| Description | zinc finger protein 71 |
| Reference | MIM:194545|HGNC:HGNC:13141|HPRD:11838| |
| Gene type | protein-coding |
| Map location | 19q13.4 |
| Pascal p-value | 0.014 |
| eGene | Myers' cis & trans |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs695809 | chr22 | 26278127 | ZNF71 | 58491 | 0.07 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| NPC2 | 0.70 | 0.72 |
| CD9 | 0.70 | 0.78 |
| CBR1 | 0.69 | 0.75 |
| LACTB2 | 0.67 | 0.74 |
| CMTM5 | 0.67 | 0.78 |
| AC087749.1 | 0.67 | 0.75 |
| SERPINB6 | 0.66 | 0.72 |
| AP003117.1 | 0.65 | 0.73 |
| SFT2D1 | 0.65 | 0.68 |
| PLA2G16 | 0.65 | 0.77 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| TLE3 | -0.56 | -0.62 |
| MYCN | -0.56 | -0.58 |
| TMEM108 | -0.56 | -0.62 |
| SLA | -0.55 | -0.58 |
| ISLR2 | -0.55 | -0.61 |
| VAV2 | -0.55 | -0.60 |
| KIAA1949 | -0.55 | -0.60 |
| MPPED1 | -0.55 | -0.62 |
| DACT1 | -0.55 | -0.62 |
| BCL7A | -0.54 | -0.56 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| HORIUCHI WTAP TARGETS UP | 306 | 188 | All SZGR 2.0 genes in this pathway |
| BASAKI YBX1 TARGETS UP | 290 | 177 | All SZGR 2.0 genes in this pathway |
| SENESE HDAC3 TARGETS DN | 536 | 332 | All SZGR 2.0 genes in this pathway |
| PEREZ TP53 TARGETS | 1174 | 695 | All SZGR 2.0 genes in this pathway |
| NUYTTEN NIPP1 TARGETS DN | 848 | 527 | All SZGR 2.0 genes in this pathway |