Summary ?
GeneID65987
SymbolKCTD14
Synonyms-
Descriptionpotassium channel tetramerization domain containing 14
ReferenceHGNC:HGNC:23295|Ensembl:ENSG00000151364|HPRD:13764|Vega:OTTHUMG00000150224
Gene typeprotein-coding
Map location11q14.1
Sherlock p-value0.901
eGeneMyers' cis & trans

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:GWASdbGenome-wide Association StudiesGWASdb records for schizophrenia
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs16829545chr2151977407KCTD14659873.859E-10trans
rs3845734chr2171125572KCTD14659875.59E-4trans
rs7584986chr2184111432KCTD14659872.341E-8trans
rs16868907chr419933369KCTD14659870.19trans
rs4575988chr419984925KCTD14659870.09trans
rs1026973chr420012154KCTD14659870.14trans
rs7664496chr456252823KCTD14659870.03trans
rs504836chr456285304KCTD14659870.02trans
rs534654chr456290219KCTD14659870.08trans
snp_a-20785690KCTD14659870.07trans
snp_a-18157710KCTD14659870.04trans
rs2183142chr4159232695KCTD14659870.1trans
rs170776chr4173276735KCTD14659870trans
rs1396222chr4173279496KCTD14659875.156E-4trans
rs335993chr4173321789KCTD14659870trans
rs335980chr4173329784KCTD14659870trans
rs335982chr4173330945KCTD14659870.03trans
rs336016chr4173366576KCTD14659870.01trans
rs10004745chr4173394996KCTD14659870.02trans
rs337984chr4173411662KCTD14659870.01trans
rs17762315chr576807576KCTD14659870.19trans
rs10491487chr580323367KCTD14659870.05trans
rs7713523chr597248325KCTD14659870.12trans
rs9461864chr633481468KCTD14659870.01trans
rs16890367chr638078448KCTD14659870.01trans
rs16929096chr863423537KCTD14659870.07trans
rs6996695chr877540580KCTD14659870.02trans
rs11139334chr984209393KCTD14659870.04trans
rs167951chr13110296561KCTD14659870.16trans
rs16955618chr1529937543KCTD14659872.997E-17trans
rs11873184chr181584081KCTD14659870.13trans
rs749043chr2046995700KCTD14659870.08trans
rs1041786chr2122617710KCTD14659870.03trans
rs5955025chrX142542997KCTD14659870.06trans
rs16993189chrX144666166KCTD14659870.08trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
TURASHVILI BREAST LOBULAR CARCINOMA VS DUCTAL NORMAL DN 9153All SZGR 2.0 genes in this pathway
SENESE HDAC3 TARGETS DN 536332All SZGR 2.0 genes in this pathway
CHEBOTAEV GR TARGETS UP 7762All SZGR 2.0 genes in this pathway
BUYTAERT PHOTODYNAMIC THERAPY STRESS DN 637377All SZGR 2.0 genes in this pathway
NIKOLSKY BREAST CANCER 11Q12 Q14 AMPLICON 15893All SZGR 2.0 genes in this pathway
IVANOVA HEMATOPOIESIS LATE PROGENITOR 544307All SZGR 2.0 genes in this pathway
SATO SILENCED BY METHYLATION IN PANCREATIC CANCER 1 419273All SZGR 2.0 genes in this pathway
SMID BREAST CANCER BASAL UP 648398All SZGR 2.0 genes in this pathway
WEST ADRENOCORTICAL TUMOR DN 546362All SZGR 2.0 genes in this pathway
CADWELL ATG16L1 TARGETS UP 9356All SZGR 2.0 genes in this pathway
MIKKELSEN ES ICP WITH H3K4ME3 718401All SZGR 2.0 genes in this pathway
PILON KLF1 TARGETS DN 19721213All SZGR 2.0 genes in this pathway
LEE BMP2 TARGETS UP 745475All SZGR 2.0 genes in this pathway
TORCHIA TARGETS OF EWSR1 FLI1 FUSION DN 321200All SZGR 2.0 genes in this pathway