Gene Page: RSG1

Summary ?
GeneID79363
SymbolRSG1
SynonymsC1orf89
DescriptionREM2 and RAB like small GTPase 1
ReferenceHGNC:HGNC:28127|Ensembl:ENSG00000132881|HPRD:14399|Vega:OTTHUMG00000002214
Gene typeprotein-coding
Map location1p36.13
Pascal p-value0.017

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs73705640C1orf89793630.12trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
EPB41L10.860.89
MAGEE10.850.88
ABR0.850.88
MAPK8IP30.850.85
MADD0.850.87
PLEKHA60.850.89
NOS1AP0.850.86
PGBD50.840.86
ZER10.840.83
STXBP10.840.86
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
AF347015.21-0.51-0.45
GNG11-0.51-0.55
C1orf54-0.49-0.52
C1orf61-0.46-0.54
PLA2G5-0.46-0.40
MYL12A-0.46-0.55
RAB13-0.45-0.53
AF347015.31-0.45-0.42
MT-CO2-0.45-0.42
IMPA2-0.45-0.50

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
KUMAR PATHOGEN LOAD BY MACROPHAGES 275155All SZGR 2.0 genes in this pathway