Gene Page: THAP9
Summary ?
| GeneID | 79725 |
| Symbol | THAP9 |
| Synonyms | hTh9 |
| Description | THAP domain containing 9 |
| Reference | MIM:612537|HGNC:HGNC:23192|Ensembl:ENSG00000168152|HPRD:15502|Vega:OTTHUMG00000130291 |
| Gene type | protein-coding |
| Map location | 4q21.22 |
| Pascal p-value | 0.027 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| NHEDC2 | 0.82 | 0.80 |
| SEC61A2 | 0.80 | 0.79 |
| CCDC132 | 0.80 | 0.80 |
| RAB1A | 0.80 | 0.81 |
| EXOC6 | 0.79 | 0.83 |
| CARS | 0.79 | 0.77 |
| JAZF1 | 0.79 | 0.80 |
| FAM81A | 0.79 | 0.82 |
| GRB2 | 0.79 | 0.78 |
| KIFAP3 | 0.79 | 0.79 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| MT-CO2 | -0.66 | -0.58 |
| AF347015.2 | -0.65 | -0.58 |
| ACSF2 | -0.64 | -0.68 |
| AF347015.8 | -0.63 | -0.56 |
| AF347015.33 | -0.63 | -0.55 |
| AP002478.3 | -0.63 | -0.67 |
| AF347015.26 | -0.63 | -0.55 |
| FXYD1 | -0.62 | -0.60 |
| AF347015.21 | -0.62 | -0.52 |
| AF347015.31 | -0.62 | -0.55 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| TAVAZOIE METASTASIS | 108 | 68 | All SZGR 2.0 genes in this pathway |