Gene Page: RERGL
Summary ?
| GeneID | 79785 |
| Symbol | RERGL |
| Synonyms | - |
| Description | RERG like |
| Reference | HGNC:HGNC:26213|Ensembl:ENSG00000111404|HPRD:08659|Vega:OTTHUMG00000168820 |
| Gene type | protein-coding |
| Map location | 12p12.3 |
| Pascal p-value | 0.045 |
| Sherlock p-value | 0.31 |
| eGene | Myers' cis & trans Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs7687434 | chr4 | 8719588 | RERGL | 79785 | 0.18 | trans | ||
| rs823371 | chr7 | 29648352 | RERGL | 79785 | 0.09 | trans | ||
| rs7076879 | chr10 | 90652511 | RERGL | 79785 | 5.703E-7 | trans |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| DELYS THYROID CANCER DN | 232 | 154 | All SZGR 2.0 genes in this pathway |
| BOQUEST STEM CELL UP | 260 | 174 | All SZGR 2.0 genes in this pathway |
| VERHAAK GLIOBLASTOMA NEURAL | 129 | 85 | All SZGR 2.0 genes in this pathway |