Summary ?
GeneID79871
SymbolRPAP2
SynonymsC1orf82|Rtr1
DescriptionRNA polymerase II associated protein 2
ReferenceMIM:611476|HGNC:HGNC:25791|HPRD:07814|
Gene typeprotein-coding
Map location1p22.1
Pascal p-value0.015
Sherlock p-value0.484
eGeneCortex
Myers' cis & trans

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs13447530chr191983798RPAP2798710.01cis
rs1954436chr162248194RPAP2798710.17trans
rs12463708chr2149073943RPAP2798710.09trans
rs16829545chr2151977407RPAP2798716.502E-7trans
rs7584986chr2184111432RPAP2798710trans
rs10183246chr2237187882RPAP2798710.13trans
rs9810143chr35060209RPAP2798710.08trans
snp_a-18157710RPAP2798710.15trans
rs12509866chr4173017639RPAP2798710.06trans
rs16955618chr1529937543RPAP2798715.276E-7trans
rs1024182chr2019391376RPAP2798710.13trans
rs6032295chr2044178138RPAP2798711.317E-4trans

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
THUM SYSTOLIC HEART FAILURE DN 244147All SZGR 2.0 genes in this pathway
GRAESSMANN APOPTOSIS BY DOXORUBICIN DN 17811082All SZGR 2.0 genes in this pathway
GEORGES TARGETS OF MIR192 AND MIR215 893528All SZGR 2.0 genes in this pathway
BONOME OVARIAN CANCER SURVIVAL SUBOPTIMAL DEBULKING 510309All SZGR 2.0 genes in this pathway
BREDEMEYER RAG SIGNALING NOT VIA ATM DN 5734All SZGR 2.0 genes in this pathway
MILI PSEUDOPODIA HAPTOTAXIS UP 518299All SZGR 2.0 genes in this pathway