Gene Page: INE1
Summary ?
| GeneID | 8552 |
| Symbol | INE1 |
| Synonyms | NCRNA00010 |
| Description | inactivation escape 1 (non-protein coding) |
| Reference | MIM:300164|HGNC:HGNC:6060|Ensembl:ENSG00000224975|HPRD:02158| |
| Gene type | ncRNA |
| Map location | Xp11.4-p11.3 |
| Fetal beta | 0.315 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| CHD8 | 0.97 | 0.97 |
| ZNF318 | 0.96 | 0.98 |
| C10orf18 | 0.96 | 0.97 |
| ADNP | 0.95 | 0.97 |
| SFRS15 | 0.95 | 0.95 |
| GON4L | 0.95 | 0.97 |
| DIDO1 | 0.95 | 0.97 |
| CYTSA | 0.95 | 0.96 |
| YEATS2 | 0.95 | 0.97 |
| SETD2 | 0.95 | 0.97 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| AF347015.31 | -0.80 | -0.89 |
| MT-CO2 | -0.79 | -0.88 |
| FXYD1 | -0.77 | -0.85 |
| AF347015.27 | -0.77 | -0.84 |
| IFI27 | -0.76 | -0.84 |
| AF347015.33 | -0.76 | -0.82 |
| HIGD1B | -0.76 | -0.87 |
| MT-CYB | -0.75 | -0.83 |
| AF347015.8 | -0.75 | -0.86 |
| AF347015.21 | -0.74 | -0.91 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| DOANE RESPONSE TO ANDROGEN UP | 184 | 125 | All SZGR 2.0 genes in this pathway |
| PUJANA BRCA1 PCC NETWORK | 1652 | 1023 | All SZGR 2.0 genes in this pathway |
| PUJANA ATM PCC NETWORK | 1442 | 892 | All SZGR 2.0 genes in this pathway |
| SHEN SMARCA2 TARGETS DN | 357 | 212 | All SZGR 2.0 genes in this pathway |
| ZWANG TRANSIENTLY UP BY 1ST EGF PULSE ONLY | 1839 | 928 | All SZGR 2.0 genes in this pathway |