Gene Page: CHURC1
Summary ?
GeneID | 91612 |
Symbol | CHURC1 |
Synonyms | C14orf52|My015|chch |
Description | churchill domain containing 1 |
Reference | MIM:608577|HGNC:HGNC:20099|Ensembl:ENSG00000258289|HPRD:12262|Vega:OTTHUMG00000170218 |
Gene type | protein-coding |
Map location | 14q23.3 |
Sherlock p-value | 0.68 |
Fetal beta | -0.697 |
eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Myers' cis & trans Meta |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
CV:PGCnp | Genome-wide Association Study | GWAS | |
PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
eQTL annotation
SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
---|---|---|---|---|---|---|---|---|
rs10498518 | chr14 | 65357541 | CHURC1 | 91612 | 0 | cis | ||
rs12590986 | chr14 | 65357691 | CHURC1 | 91612 | 0 | cis | ||
rs2412065 | chr14 | 65407656 | CHURC1 | 91612 | 6.73E-5 | cis | ||
rs2737844 | chr14 | 65408508 | CHURC1 | 91612 | 0.01 | cis | ||
rs2898885 | chr14 | 65421273 | CHURC1 | 91612 | 0.06 | cis | ||
rs8007405 | chr14 | 65430327 | CHURC1 | 91612 | 0.08 | cis | ||
rs4899158 | chr14 | 65433330 | CHURC1 | 91612 | 0.08 | cis | ||
rs13019783 | chr2 | 212538414 | CHURC1 | 91612 | 0.02 | trans | ||
rs6856051 | chr4 | 71600251 | CHURC1 | 91612 | 0.19 | trans | ||
rs6834662 | chr4 | 71605100 | CHURC1 | 91612 | 0.05 | trans | ||
rs4886102 | chr13 | 59338292 | CHURC1 | 91612 | 0.19 | trans | ||
rs7326372 | chr13 | 59355547 | CHURC1 | 91612 | 0.19 | trans | ||
rs10498518 | chr14 | 65357541 | CHURC1 | 91612 | 0.14 | trans | ||
rs12590986 | chr14 | 65357691 | CHURC1 | 91612 | 0.1 | trans | ||
rs2412065 | chr14 | 65407656 | CHURC1 | 91612 | 0.01 | trans | ||
rs16939915 | chr15 | 87664652 | CHURC1 | 91612 | 0.09 | trans | ||
rs12889323 | 14 | 65352592 | CHURC1 | ENSG00000258289.3 | 1.382E-6 | 0 | -44926 | gtex_brain_ba24 |
rs10142379 | 14 | 65354946 | CHURC1 | ENSG00000258289.3 | 7.828E-8 | 0 | -42572 | gtex_brain_ba24 |
rs10144942 | 14 | 65355042 | CHURC1 | ENSG00000258289.3 | 7.874E-8 | 0 | -42476 | gtex_brain_ba24 |
rs1957426 | 14 | 65355575 | CHURC1 | ENSG00000258289.3 | 7.982E-10 | 0 | -41943 | gtex_brain_ba24 |
rs11626982 | 14 | 65355904 | CHURC1 | ENSG00000258289.3 | 8.253E-10 | 0 | -41614 | gtex_brain_ba24 |
rs762071 | 14 | 65356644 | CHURC1 | ENSG00000258289.3 | 8.441E-10 | 0 | -40874 | gtex_brain_ba24 |
rs743264 | 14 | 65356936 | CHURC1 | ENSG00000258289.3 | 8.554E-10 | 0 | -40582 | gtex_brain_ba24 |
rs2357867 | 14 | 65357303 | CHURC1 | ENSG00000258289.3 | 7.831E-8 | 0 | -40215 | gtex_brain_ba24 |
rs2357868 | 14 | 65357355 | CHURC1 | ENSG00000258289.3 | 8.63E-10 | 0 | -40163 | gtex_brain_ba24 |
rs10498518 | 14 | 65357542 | CHURC1 | ENSG00000258289.3 | 8.69E-10 | 0 | -39976 | gtex_brain_ba24 |
rs12590986 | 14 | 65357692 | CHURC1 | ENSG00000258289.3 | 8.685E-10 | 0 | -39826 | gtex_brain_ba24 |
rs1957425 | 14 | 65358576 | CHURC1 | ENSG00000258289.3 | 8.746E-10 | 0 | -38942 | gtex_brain_ba24 |
rs1957424 | 14 | 65358787 | CHURC1 | ENSG00000258289.3 | 8.776E-10 | 0 | -38731 | gtex_brain_ba24 |
rs7151401 | 14 | 65359480 | CHURC1 | ENSG00000258289.3 | 4.924E-10 | 0 | -38038 | gtex_brain_ba24 |
rs7151780 | 14 | 65359699 | CHURC1 | ENSG00000258289.3 | 8.833E-10 | 0 | -37819 | gtex_brain_ba24 |
rs71123889 | 14 | 65359787 | CHURC1 | ENSG00000258289.3 | 7.044E-9 | 0 | -37731 | gtex_brain_ba24 |
rs12889417 | 14 | 65359884 | CHURC1 | ENSG00000258289.3 | 8.833E-10 | 0 | -37634 | gtex_brain_ba24 |
rs12890654 | 14 | 65359901 | CHURC1 | ENSG00000258289.3 | 8.833E-10 | 0 | -37617 | gtex_brain_ba24 |
rs12881353 | 14 | 65363615 | CHURC1 | ENSG00000258289.3 | 9.098E-10 | 0 | -33903 | gtex_brain_ba24 |
rs1957421 | 14 | 65363804 | CHURC1 | ENSG00000258289.3 | 9.13E-10 | 0 | -33714 | gtex_brain_ba24 |
rs1957419 | 14 | 65364095 | CHURC1 | ENSG00000258289.3 | 9.13E-10 | 0 | -33423 | gtex_brain_ba24 |
rs35176965 | 14 | 65365207 | CHURC1 | ENSG00000258289.3 | 9.255E-10 | 0 | -32311 | gtex_brain_ba24 |
rs34201584 | 14 | 65365226 | CHURC1 | ENSG00000258289.3 | 7.032E-10 | 0 | -32292 | gtex_brain_ba24 |
rs12433639 | 14 | 65365291 | CHURC1 | ENSG00000258289.3 | 9.255E-10 | 0 | -32227 | gtex_brain_ba24 |
rs12436747 | 14 | 65365308 | CHURC1 | ENSG00000258289.3 | 7.032E-10 | 0 | -32210 | gtex_brain_ba24 |
rs12433641 | 14 | 65365311 | CHURC1 | ENSG00000258289.3 | 9.255E-10 | 0 | -32207 | gtex_brain_ba24 |
rs1957418 | 14 | 65365612 | CHURC1 | ENSG00000258289.3 | 9.248E-10 | 0 | -31906 | gtex_brain_ba24 |
rs11848113 | 14 | 65366261 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -31257 | gtex_brain_ba24 |
rs150382953 | 14 | 65367255 | CHURC1 | ENSG00000258289.3 | 2.112E-10 | 0 | -30263 | gtex_brain_ba24 |
rs201166446 | 14 | 65367269 | CHURC1 | ENSG00000258289.3 | 2.525E-7 | 0 | -30249 | gtex_brain_ba24 |
rs1024239 | 14 | 65367270 | CHURC1 | ENSG00000258289.3 | 8.747E-10 | 0 | -30248 | gtex_brain_ba24 |
rs12884463 | 14 | 65367703 | CHURC1 | ENSG00000258289.3 | 4.712E-10 | 0 | -29815 | gtex_brain_ba24 |
rs11622394 | 14 | 65367930 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -29588 | gtex_brain_ba24 |
rs11627589 | 14 | 65368360 | CHURC1 | ENSG00000258289.3 | 9.312E-10 | 0 | -29158 | gtex_brain_ba24 |
rs11627688 | 14 | 65368526 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -28992 | gtex_brain_ba24 |
rs1957417 | 14 | 65368991 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -28527 | gtex_brain_ba24 |
rs8021590 | 14 | 65371209 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -26309 | gtex_brain_ba24 |
rs200804505 | 14 | 65371361 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -26157 | gtex_brain_ba24 |
rs8022122 | 14 | 65371508 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -26010 | gtex_brain_ba24 |
rs8021876 | 14 | 65371556 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -25962 | gtex_brain_ba24 |
rs8021998 | 14 | 65371597 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -25921 | gtex_brain_ba24 |
rs12878467 | 14 | 65371918 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -25600 | gtex_brain_ba24 |
rs12897440 | 14 | 65371933 | CHURC1 | ENSG00000258289.3 | 6.213E-10 | 0 | -25585 | gtex_brain_ba24 |
rs1951488 | 14 | 65372213 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -25305 | gtex_brain_ba24 |
rs1951487 | 14 | 65372348 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -25170 | gtex_brain_ba24 |
rs55719259 | 14 | 65372524 | CHURC1 | ENSG00000258289.3 | 9.312E-10 | 0 | -24994 | gtex_brain_ba24 |
rs150330200 | 14 | 65372530 | CHURC1 | ENSG00000258289.3 | 9.312E-10 | 0 | -24988 | gtex_brain_ba24 |
rs11158568 | 14 | 65372704 | CHURC1 | ENSG00000258289.3 | 3.333E-9 | 0 | -24814 | gtex_brain_ba24 |
rs6573585 | 14 | 65373868 | CHURC1 | ENSG00000258289.3 | 7.074E-10 | 0 | -23650 | gtex_brain_ba24 |
rs8019971 | 14 | 65374464 | CHURC1 | ENSG00000258289.3 | 9.467E-10 | 0 | -23054 | gtex_brain_ba24 |
rs8019259 | 14 | 65374597 | CHURC1 | ENSG00000258289.3 | 9.889E-10 | 0 | -22921 | gtex_brain_ba24 |
rs8019750 | 14 | 65374863 | CHURC1 | ENSG00000258289.3 | 9.889E-10 | 0 | -22655 | gtex_brain_ba24 |
rs10129479 | 14 | 65375180 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -22338 | gtex_brain_ba24 |
rs10142016 | 14 | 65375444 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -22074 | gtex_brain_ba24 |
rs4902332 | 14 | 65375978 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -21540 | gtex_brain_ba24 |
rs4902333 | 14 | 65376086 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -21432 | gtex_brain_ba24 |
rs17102298 | 14 | 65376736 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -20782 | gtex_brain_ba24 |
rs7154406 | 14 | 65377189 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -20329 | gtex_brain_ba24 |
rs7153503 | 14 | 65377483 | CHURC1 | ENSG00000258289.3 | 1.647E-7 | 0 | -20035 | gtex_brain_ba24 |
rs7153990 | 14 | 65377550 | CHURC1 | ENSG00000258289.3 | 1.647E-7 | 0 | -19968 | gtex_brain_ba24 |
rs10139079 | 14 | 65378042 | CHURC1 | ENSG00000258289.3 | 1.055E-7 | 0 | -19476 | gtex_brain_ba24 |
rs10139595 | 14 | 65378259 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -19259 | gtex_brain_ba24 |
rs10151701 | 14 | 65378449 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -19069 | gtex_brain_ba24 |
rs7160518 | 14 | 65378698 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -18820 | gtex_brain_ba24 |
rs7143432 | 14 | 65379146 | CHURC1 | ENSG00000258289.3 | 1.65E-7 | 0 | -18372 | gtex_brain_ba24 |
rs7144811 | 14 | 65379147 | CHURC1 | ENSG00000258289.3 | 1.651E-7 | 0 | -18371 | gtex_brain_ba24 |
rs7143764 | 14 | 65379283 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -18235 | gtex_brain_ba24 |
rs10143017 | 14 | 65379618 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -17900 | gtex_brain_ba24 |
rs28451373 | 14 | 65383442 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -14076 | gtex_brain_ba24 |
rs28508270 | 14 | 65383555 | CHURC1 | ENSG00000258289.3 | 9.975E-8 | 0 | -13963 | gtex_brain_ba24 |
rs10148687 | 14 | 65384276 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -13242 | gtex_brain_ba24 |
rs4902335 | 14 | 65385898 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -11620 | gtex_brain_ba24 |
rs10132396 | 14 | 65386367 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -11151 | gtex_brain_ba24 |
rs10132742 | 14 | 65386922 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -10596 | gtex_brain_ba24 |
rs4899152 | 14 | 65387116 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -10402 | gtex_brain_ba24 |
rs4902336 | 14 | 65387262 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -10256 | gtex_brain_ba24 |
rs10138534 | 14 | 65387989 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -9529 | gtex_brain_ba24 |
rs59995630 | 14 | 65388188 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -9330 | gtex_brain_ba24 |
rs4902337 | 14 | 65388468 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -9050 | gtex_brain_ba24 |
rs4899153 | 14 | 65388711 | CHURC1 | ENSG00000258289.3 | 1.034E-7 | 0 | -8807 | gtex_brain_ba24 |
rs10131002 | 14 | 65389250 | CHURC1 | ENSG00000258289.3 | 1.029E-7 | 0 | -8268 | gtex_brain_ba24 |
rs10141986 | 14 | 65389403 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -8115 | gtex_brain_ba24 |
rs3033504 | 14 | 65392542 | CHURC1 | ENSG00000258289.3 | 1.216E-7 | 0 | -4976 | gtex_brain_ba24 |
rs2147615 | 14 | 65392918 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -4600 | gtex_brain_ba24 |
rs3949937 | 14 | 65393727 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -3791 | gtex_brain_ba24 |
rs4902338 | 14 | 65394068 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -3450 | gtex_brain_ba24 |
rs67330703 | 14 | 65395064 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -2454 | gtex_brain_ba24 |
rs4902340 | 14 | 65395381 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -2137 | gtex_brain_ba24 |
rs11331213 | 14 | 65395443 | CHURC1 | ENSG00000258289.3 | 1.018E-7 | 0 | -2075 | gtex_brain_ba24 |
rs4902341 | 14 | 65395625 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -1893 | gtex_brain_ba24 |
rs4902343 | 14 | 65396180 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -1338 | gtex_brain_ba24 |
rs10147758 | 14 | 65396643 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -875 | gtex_brain_ba24 |
rs10137070 | 14 | 65396727 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | -791 | gtex_brain_ba24 |
rs11158569 | 14 | 65400069 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 2551 | gtex_brain_ba24 |
rs35743220 | 14 | 65400745 | CHURC1 | ENSG00000258289.3 | 1.018E-7 | 0 | 3227 | gtex_brain_ba24 |
rs35683432 | 14 | 65400784 | CHURC1 | ENSG00000258289.3 | 8.842E-8 | 0 | 3266 | gtex_brain_ba24 |
rs6745 | 14 | 65401695 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 4177 | gtex_brain_ba24 |
rs10146885 | 14 | 65401819 | CHURC1 | ENSG00000258289.3 | 1.373E-7 | 0 | 4301 | gtex_brain_ba24 |
rs10149617 | 14 | 65402161 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 4643 | gtex_brain_ba24 |
rs4902345 | 14 | 65403904 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 6386 | gtex_brain_ba24 |
rs10132858 | 14 | 65403978 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 6460 | gtex_brain_ba24 |
rs10133054 | 14 | 65404116 | CHURC1 | ENSG00000258289.3 | 3.3E-7 | 0 | 6598 | gtex_brain_ba24 |
rs10133290 | 14 | 65404442 | CHURC1 | ENSG00000258289.3 | 1.055E-7 | 0 | 6924 | gtex_brain_ba24 |
rs17880380 | 14 | 65404899 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 7381 | gtex_brain_ba24 |
rs17881498 | 14 | 65404932 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 7414 | gtex_brain_ba24 |
rs12172810 | 14 | 65405382 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 7864 | gtex_brain_ba24 |
rs4902346 | 14 | 65407160 | CHURC1 | ENSG00000258289.3 | 1.028E-7 | 0 | 9642 | gtex_brain_ba24 |
rs2412065 | 14 | 65407657 | CHURC1 | ENSG00000258289.3 | 1.026E-7 | 0 | 10139 | gtex_brain_ba24 |
rs3831077 | 14 | 65410200 | CHURC1 | ENSG00000258289.3 | 1.464E-7 | 0 | 12682 | gtex_brain_ba24 |
rs2296327 | 14 | 65410547 | CHURC1 | ENSG00000258289.3 | 1.938E-7 | 0 | 13029 | gtex_brain_ba24 |
rs3742599 | 14 | 65411908 | CHURC1 | ENSG00000258289.3 | 2.988E-7 | 0 | 14390 | gtex_brain_ba24 |
rs1886506 | 14 | 65415366 | CHURC1 | ENSG00000258289.3 | 2.665E-7 | 0 | 17848 | gtex_brain_ba24 |
rs373172394 | 14 | 65415472 | CHURC1 | ENSG00000258289.3 | 6.195E-7 | 0 | 17954 | gtex_brain_ba24 |
rs111372722 | 14 | 65431401 | CHURC1 | ENSG00000258289.3 | 6.78E-7 | 0 | 33883 | gtex_brain_ba24 |
rs2828 | 14 | 65336050 | CHURC1 | ENSG00000258289.3 | 1.619E-6 | 0 | -61468 | gtex_brain_putamen_basal |
rs12889323 | 14 | 65352592 | CHURC1 | ENSG00000258289.3 | 9.705E-9 | 0 | -44926 | gtex_brain_putamen_basal |
rs10142379 | 14 | 65354946 | CHURC1 | ENSG00000258289.3 | 3.121E-8 | 0 | -42572 | gtex_brain_putamen_basal |
rs10144942 | 14 | 65355042 | CHURC1 | ENSG00000258289.3 | 3.092E-8 | 0 | -42476 | gtex_brain_putamen_basal |
rs1957426 | 14 | 65355575 | CHURC1 | ENSG00000258289.3 | 3.31E-11 | 0 | -41943 | gtex_brain_putamen_basal |
rs11626982 | 14 | 65355904 | CHURC1 | ENSG00000258289.3 | 3.35E-11 | 0 | -41614 | gtex_brain_putamen_basal |
rs762071 | 14 | 65356644 | CHURC1 | ENSG00000258289.3 | 3.274E-11 | 0 | -40874 | gtex_brain_putamen_basal |
rs743264 | 14 | 65356936 | CHURC1 | ENSG00000258289.3 | 3.267E-11 | 0 | -40582 | gtex_brain_putamen_basal |
rs743263 | 14 | 65357098 | CHURC1 | ENSG00000258289.3 | 5.066E-9 | 0 | -40420 | gtex_brain_putamen_basal |
rs2357867 | 14 | 65357303 | CHURC1 | ENSG00000258289.3 | 3.279E-11 | 0 | -40215 | gtex_brain_putamen_basal |
rs2357868 | 14 | 65357355 | CHURC1 | ENSG00000258289.3 | 3.256E-11 | 0 | -40163 | gtex_brain_putamen_basal |
rs3066783 | 14 | 65357498 | CHURC1 | ENSG00000258289.3 | 2.537E-6 | 0 | -40020 | gtex_brain_putamen_basal |
rs10498518 | 14 | 65357542 | CHURC1 | ENSG00000258289.3 | 3.256E-11 | 0 | -39976 | gtex_brain_putamen_basal |
rs12590986 | 14 | 65357692 | CHURC1 | ENSG00000258289.3 | 3.249E-11 | 0 | -39826 | gtex_brain_putamen_basal |
rs1957425 | 14 | 65358576 | CHURC1 | ENSG00000258289.3 | 3.249E-11 | 0 | -38942 | gtex_brain_putamen_basal |
rs1957424 | 14 | 65358787 | CHURC1 | ENSG00000258289.3 | 3.249E-11 | 0 | -38731 | gtex_brain_putamen_basal |
rs1957423 | 14 | 65358789 | CHURC1 | ENSG00000258289.3 | 2.273E-9 | 0 | -38729 | gtex_brain_putamen_basal |
rs7151401 | 14 | 65359480 | CHURC1 | ENSG00000258289.3 | 4.341E-11 | 0 | -38038 | gtex_brain_putamen_basal |
rs7151780 | 14 | 65359699 | CHURC1 | ENSG00000258289.3 | 3.241E-11 | 0 | -37819 | gtex_brain_putamen_basal |
rs71123889 | 14 | 65359787 | CHURC1 | ENSG00000258289.3 | 2.307E-11 | 0 | -37731 | gtex_brain_putamen_basal |
rs12889417 | 14 | 65359884 | CHURC1 | ENSG00000258289.3 | 3.241E-11 | 0 | -37634 | gtex_brain_putamen_basal |
rs12890654 | 14 | 65359901 | CHURC1 | ENSG00000258289.3 | 3.241E-11 | 0 | -37617 | gtex_brain_putamen_basal |
rs12881353 | 14 | 65363615 | CHURC1 | ENSG00000258289.3 | 3.219E-11 | 0 | -33903 | gtex_brain_putamen_basal |
rs1957421 | 14 | 65363804 | CHURC1 | ENSG00000258289.3 | 8.349E-11 | 0 | -33714 | gtex_brain_putamen_basal |
rs1957419 | 14 | 65364095 | CHURC1 | ENSG00000258289.3 | 3.219E-11 | 0 | -33423 | gtex_brain_putamen_basal |
rs34969442 | 14 | 65365066 | CHURC1 | ENSG00000258289.3 | 2.251E-9 | 0 | -32452 | gtex_brain_putamen_basal |
rs35176965 | 14 | 65365207 | CHURC1 | ENSG00000258289.3 | 3.191E-11 | 0 | -32311 | gtex_brain_putamen_basal |
rs34201584 | 14 | 65365226 | CHURC1 | ENSG00000258289.3 | 3.049E-12 | 0 | -32292 | gtex_brain_putamen_basal |
rs12433639 | 14 | 65365291 | CHURC1 | ENSG00000258289.3 | 3.191E-11 | 0 | -32227 | gtex_brain_putamen_basal |
rs12436747 | 14 | 65365308 | CHURC1 | ENSG00000258289.3 | 3.049E-12 | 0 | -32210 | gtex_brain_putamen_basal |
rs12433641 | 14 | 65365311 | CHURC1 | ENSG00000258289.3 | 3.191E-11 | 0 | -32207 | gtex_brain_putamen_basal |
rs1957418 | 14 | 65365612 | CHURC1 | ENSG00000258289.3 | 3.205E-11 | 0 | -31906 | gtex_brain_putamen_basal |
rs11848113 | 14 | 65366261 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -31257 | gtex_brain_putamen_basal |
rs12878229 | 14 | 65366485 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -31033 | gtex_brain_putamen_basal |
rs150382953 | 14 | 65367255 | CHURC1 | ENSG00000258289.3 | 6.787E-12 | 0 | -30263 | gtex_brain_putamen_basal |
rs201166446 | 14 | 65367269 | CHURC1 | ENSG00000258289.3 | 4.423E-10 | 0 | -30249 | gtex_brain_putamen_basal |
rs1024239 | 14 | 65367270 | CHURC1 | ENSG00000258289.3 | 7.492E-11 | 0 | -30248 | gtex_brain_putamen_basal |
rs12884463 | 14 | 65367703 | CHURC1 | ENSG00000258289.3 | 2.932E-12 | 0 | -29815 | gtex_brain_putamen_basal |
rs11622394 | 14 | 65367930 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -29588 | gtex_brain_putamen_basal |
rs11627589 | 14 | 65368360 | CHURC1 | ENSG00000258289.3 | 3.205E-11 | 0 | -29158 | gtex_brain_putamen_basal |
rs11627688 | 14 | 65368526 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -28992 | gtex_brain_putamen_basal |
rs1957417 | 14 | 65368991 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -28527 | gtex_brain_putamen_basal |
rs11308429 | 14 | 65370389 | CHURC1 | ENSG00000258289.3 | 1.997E-9 | 0 | -27129 | gtex_brain_putamen_basal |
rs8016174 | 14 | 65370481 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -27037 | gtex_brain_putamen_basal |
rs12891652 | 14 | 65370803 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -26715 | gtex_brain_putamen_basal |
rs8021590 | 14 | 65371209 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -26309 | gtex_brain_putamen_basal |
rs200804505 | 14 | 65371361 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -26157 | gtex_brain_putamen_basal |
rs8022122 | 14 | 65371508 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -26010 | gtex_brain_putamen_basal |
rs8021876 | 14 | 65371556 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -25962 | gtex_brain_putamen_basal |
rs8021998 | 14 | 65371597 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -25921 | gtex_brain_putamen_basal |
rs12878467 | 14 | 65371918 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -25600 | gtex_brain_putamen_basal |
rs12897440 | 14 | 65371933 | CHURC1 | ENSG00000258289.3 | 4.523E-12 | 0 | -25585 | gtex_brain_putamen_basal |
rs1951488 | 14 | 65372213 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -25305 | gtex_brain_putamen_basal |
rs1951487 | 14 | 65372348 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -25170 | gtex_brain_putamen_basal |
rs55719259 | 14 | 65372524 | CHURC1 | ENSG00000258289.3 | 3.205E-11 | 0 | -24994 | gtex_brain_putamen_basal |
rs150330200 | 14 | 65372530 | CHURC1 | ENSG00000258289.3 | 3.205E-11 | 0 | -24988 | gtex_brain_putamen_basal |
rs56271264 | 14 | 65372531 | CHURC1 | ENSG00000258289.3 | 7.076E-7 | 0 | -24987 | gtex_brain_putamen_basal |
rs11158568 | 14 | 65372704 | CHURC1 | ENSG00000258289.3 | 2.448E-9 | 0 | -24814 | gtex_brain_putamen_basal |
rs6573585 | 14 | 65373868 | CHURC1 | ENSG00000258289.3 | 3.06E-12 | 0 | -23650 | gtex_brain_putamen_basal |
rs8019971 | 14 | 65374464 | CHURC1 | ENSG00000258289.3 | 1.226E-11 | 0 | -23054 | gtex_brain_putamen_basal |
rs8019259 | 14 | 65374597 | CHURC1 | ENSG00000258289.3 | 1.26E-11 | 0 | -22921 | gtex_brain_putamen_basal |
rs8019750 | 14 | 65374863 | CHURC1 | ENSG00000258289.3 | 1.26E-11 | 0 | -22655 | gtex_brain_putamen_basal |
rs8003530 | 14 | 65375085 | CHURC1 | ENSG00000258289.3 | 2.053E-9 | 0 | -22433 | gtex_brain_putamen_basal |
rs10129479 | 14 | 65375180 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -22338 | gtex_brain_putamen_basal |
rs10142016 | 14 | 65375444 | CHURC1 | ENSG00000258289.3 | 4.883E-8 | 0 | -22074 | gtex_brain_putamen_basal |
rs12879744 | 14 | 65375802 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -21716 | gtex_brain_putamen_basal |
rs4902332 | 14 | 65375978 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -21540 | gtex_brain_putamen_basal |
rs4902333 | 14 | 65376086 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -21432 | gtex_brain_putamen_basal |
rs17102298 | 14 | 65376736 | CHURC1 | ENSG00000258289.3 | 1.304E-8 | 0 | -20782 | gtex_brain_putamen_basal |
rs7154406 | 14 | 65377189 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -20329 | gtex_brain_putamen_basal |
rs7153503 | 14 | 65377483 | CHURC1 | ENSG00000258289.3 | 2.158E-7 | 0 | -20035 | gtex_brain_putamen_basal |
rs7153990 | 14 | 65377550 | CHURC1 | ENSG00000258289.3 | 2.078E-7 | 0 | -19968 | gtex_brain_putamen_basal |
rs10139079 | 14 | 65378042 | CHURC1 | ENSG00000258289.3 | 1.392E-8 | 0 | -19476 | gtex_brain_putamen_basal |
rs10139435 | 14 | 65378120 | CHURC1 | ENSG00000258289.3 | 2.646E-6 | 0 | -19398 | gtex_brain_putamen_basal |
rs10139595 | 14 | 65378259 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -19259 | gtex_brain_putamen_basal |
rs10151701 | 14 | 65378449 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -19069 | gtex_brain_putamen_basal |
rs7160518 | 14 | 65378698 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -18820 | gtex_brain_putamen_basal |
rs7143358 | 14 | 65378962 | CHURC1 | ENSG00000258289.3 | 1.963E-8 | 0 | -18556 | gtex_brain_putamen_basal |
rs7143432 | 14 | 65379146 | CHURC1 | ENSG00000258289.3 | 2.494E-7 | 0 | -18372 | gtex_brain_putamen_basal |
rs7144811 | 14 | 65379147 | CHURC1 | ENSG00000258289.3 | 2.504E-7 | 0 | -18371 | gtex_brain_putamen_basal |
rs7143764 | 14 | 65379283 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -18235 | gtex_brain_putamen_basal |
rs10143017 | 14 | 65379618 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -17900 | gtex_brain_putamen_basal |
rs28451373 | 14 | 65383442 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -14076 | gtex_brain_putamen_basal |
rs28508270 | 14 | 65383555 | CHURC1 | ENSG00000258289.3 | 1.375E-8 | 0 | -13963 | gtex_brain_putamen_basal |
rs10148687 | 14 | 65384276 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -13242 | gtex_brain_putamen_basal |
rs4902334 | 14 | 65385820 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -11698 | gtex_brain_putamen_basal |
rs4902335 | 14 | 65385898 | CHURC1 | ENSG00000258289.3 | 1.396E-8 | 0 | -11620 | gtex_brain_putamen_basal |
rs10132396 | 14 | 65386367 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -11151 | gtex_brain_putamen_basal |
rs10132742 | 14 | 65386922 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -10596 | gtex_brain_putamen_basal |
rs4899152 | 14 | 65387116 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -10402 | gtex_brain_putamen_basal |
rs4902336 | 14 | 65387262 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -10256 | gtex_brain_putamen_basal |
rs10136196 | 14 | 65387953 | CHURC1 | ENSG00000258289.3 | 7.558E-9 | 0 | -9565 | gtex_brain_putamen_basal |
rs10138534 | 14 | 65387989 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -9529 | gtex_brain_putamen_basal |
rs59995630 | 14 | 65388188 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -9330 | gtex_brain_putamen_basal |
rs4902337 | 14 | 65388468 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -9050 | gtex_brain_putamen_basal |
rs4899153 | 14 | 65388711 | CHURC1 | ENSG00000258289.3 | 1.727E-8 | 0 | -8807 | gtex_brain_putamen_basal |
rs10131002 | 14 | 65389250 | CHURC1 | ENSG00000258289.3 | 1.675E-8 | 0 | -8268 | gtex_brain_putamen_basal |
rs10141986 | 14 | 65389403 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -8115 | gtex_brain_putamen_basal |
rs2147616 | 14 | 65391102 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -6416 | gtex_brain_putamen_basal |
rs4243629 | 14 | 65392367 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -5151 | gtex_brain_putamen_basal |
rs2898874 | 14 | 65392474 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -5044 | gtex_brain_putamen_basal |
rs3033504 | 14 | 65392542 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -4976 | gtex_brain_putamen_basal |
rs2147615 | 14 | 65392918 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -4600 | gtex_brain_putamen_basal |
rs2147612 | 14 | 65393634 | CHURC1 | ENSG00000258289.3 | 2.484E-9 | 0 | -3884 | gtex_brain_putamen_basal |
rs3949937 | 14 | 65393727 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -3791 | gtex_brain_putamen_basal |
rs4902338 | 14 | 65394068 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -3450 | gtex_brain_putamen_basal |
rs4902339 | 14 | 65394290 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -3228 | gtex_brain_putamen_basal |
rs67330703 | 14 | 65395064 | CHURC1 | ENSG00000258289.3 | 1.394E-8 | 0 | -2454 | gtex_brain_putamen_basal |
rs4902340 | 14 | 65395381 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -2137 | gtex_brain_putamen_basal |
rs11331213 | 14 | 65395443 | CHURC1 | ENSG00000258289.3 | 1.55E-8 | 0 | -2075 | gtex_brain_putamen_basal |
rs4902341 | 14 | 65395625 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -1893 | gtex_brain_putamen_basal |
rs4902343 | 14 | 65396180 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -1338 | gtex_brain_putamen_basal |
rs10147758 | 14 | 65396643 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -875 | gtex_brain_putamen_basal |
rs10137070 | 14 | 65396727 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | -791 | gtex_brain_putamen_basal |
rs1951993 | 14 | 65396924 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | -594 | gtex_brain_putamen_basal |
rs8943 | 14 | 65399263 | CHURC1 | ENSG00000258289.3 | 1.691E-8 | 0 | 1745 | gtex_brain_putamen_basal |
rs9281 | 14 | 65399291 | CHURC1 | ENSG00000258289.3 | 1.691E-8 | 0 | 1773 | gtex_brain_putamen_basal |
rs8984 | 14 | 65399306 | CHURC1 | ENSG00000258289.3 | 1.691E-8 | 0 | 1788 | gtex_brain_putamen_basal |
rs11158569 | 14 | 65400069 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 2551 | gtex_brain_putamen_basal |
rs1064108 | 14 | 65400265 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | 2747 | gtex_brain_putamen_basal |
rs35743220 | 14 | 65400745 | CHURC1 | ENSG00000258289.3 | 1.28E-8 | 0 | 3227 | gtex_brain_putamen_basal |
rs35683432 | 14 | 65400784 | CHURC1 | ENSG00000258289.3 | 1.378E-8 | 0 | 3266 | gtex_brain_putamen_basal |
rs6745 | 14 | 65401695 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 4177 | gtex_brain_putamen_basal |
rs10146885 | 14 | 65401819 | CHURC1 | ENSG00000258289.3 | 1.946E-6 | 0 | 4301 | gtex_brain_putamen_basal |
rs10149617 | 14 | 65402161 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 4643 | gtex_brain_putamen_basal |
rs4902345 | 14 | 65403904 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 6386 | gtex_brain_putamen_basal |
rs10132858 | 14 | 65403978 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 6460 | gtex_brain_putamen_basal |
rs10133054 | 14 | 65404116 | CHURC1 | ENSG00000258289.3 | 1.178E-7 | 0 | 6598 | gtex_brain_putamen_basal |
rs10133290 | 14 | 65404442 | CHURC1 | ENSG00000258289.3 | 1.392E-8 | 0 | 6924 | gtex_brain_putamen_basal |
rs17880380 | 14 | 65404899 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 7381 | gtex_brain_putamen_basal |
rs17881498 | 14 | 65404932 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 7414 | gtex_brain_putamen_basal |
rs12172810 | 14 | 65405382 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 7864 | gtex_brain_putamen_basal |
rs2071566 | 14 | 65407000 | CHURC1 | ENSG00000258289.3 | 2.247E-9 | 0 | 9482 | gtex_brain_putamen_basal |
rs4902346 | 14 | 65407160 | CHURC1 | ENSG00000258289.3 | 1.39E-8 | 0 | 9642 | gtex_brain_putamen_basal |
rs2412065 | 14 | 65407657 | CHURC1 | ENSG00000258289.3 | 1.395E-8 | 0 | 10139 | gtex_brain_putamen_basal |
rs10145845 | 14 | 65407973 | CHURC1 | ENSG00000258289.3 | 2.454E-9 | 0 | 10455 | gtex_brain_putamen_basal |
rs2737844 | 14 | 65408509 | CHURC1 | ENSG00000258289.3 | 2.871E-9 | 0 | 10991 | gtex_brain_putamen_basal |
rs2296327 | 14 | 65410547 | CHURC1 | ENSG00000258289.3 | 3.849E-8 | 0 | 13029 | gtex_brain_putamen_basal |
rs2277501 | 14 | 65412441 | CHURC1 | ENSG00000258289.3 | 8.53E-10 | 0 | 14923 | gtex_brain_putamen_basal |
rs3087955 | 14 | 65412748 | CHURC1 | ENSG00000258289.3 | 3.945E-8 | 0 | 15230 | gtex_brain_putamen_basal |
rs3759681 | 14 | 65413606 | CHURC1 | ENSG00000258289.3 | 2.151E-8 | 0 | 16088 | gtex_brain_putamen_basal |
rs2296326 | 14 | 65414372 | CHURC1 | ENSG00000258289.3 | 1.835E-9 | 0 | 16854 | gtex_brain_putamen_basal |
rs11540873 | 14 | 65414659 | CHURC1 | ENSG00000258289.3 | 2.175E-8 | 0 | 17141 | gtex_brain_putamen_basal |
rs11540872 | 14 | 65414738 | CHURC1 | ENSG00000258289.3 | 1.47E-6 | 0 | 17220 | gtex_brain_putamen_basal |
rs1886506 | 14 | 65415366 | CHURC1 | ENSG00000258289.3 | 1.862E-6 | 0 | 17848 | gtex_brain_putamen_basal |
rs45454295 | 14 | 65419293 | CHURC1 | ENSG00000258289.3 | 2.176E-8 | 0 | 21775 | gtex_brain_putamen_basal |
rs11623886 | 14 | 65423262 | CHURC1 | ENSG00000258289.3 | 5.982E-9 | 0 | 25744 | gtex_brain_putamen_basal |
rs7359095 | 14 | 65426794 | CHURC1 | ENSG00000258289.3 | 1.142E-7 | 0 | 29276 | gtex_brain_putamen_basal |
rs2412106 | 14 | 65427810 | CHURC1 | ENSG00000258289.3 | 9.281E-8 | 0 | 30292 | gtex_brain_putamen_basal |
rs34852276 | 14 | 65428165 | CHURC1 | ENSG00000258289.3 | 4.256E-8 | 0 | 30647 | gtex_brain_putamen_basal |
rs6573586 | 14 | 65428658 | CHURC1 | ENSG00000258289.3 | 6.266E-7 | 0 | 31140 | gtex_brain_putamen_basal |
rs4899155 | 14 | 65429186 | CHURC1 | ENSG00000258289.3 | 2.408E-7 | 0 | 31668 | gtex_brain_putamen_basal |
rs2412105 | 14 | 65429519 | CHURC1 | ENSG00000258289.3 | 3.137E-8 | 0 | 32001 | gtex_brain_putamen_basal |
rs8007405 | 14 | 65430328 | CHURC1 | ENSG00000258289.3 | 4.045E-7 | 0 | 32810 | gtex_brain_putamen_basal |
rs67447889 | 14 | 65431248 | CHURC1 | ENSG00000258289.3 | 9.071E-7 | 0 | 33730 | gtex_brain_putamen_basal |
rs4899158 | 14 | 65433331 | CHURC1 | ENSG00000258289.3 | 1.099E-6 | 0 | 35813 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
WANG LMO4 TARGETS DN | 352 | 225 | All SZGR 2.0 genes in this pathway |
OSMAN BLADDER CANCER UP | 404 | 246 | All SZGR 2.0 genes in this pathway |
GINESTIER BREAST CANCER ZNF217 AMPLIFIED UP | 78 | 48 | All SZGR 2.0 genes in this pathway |
NUYTTEN NIPP1 TARGETS UP | 769 | 437 | All SZGR 2.0 genes in this pathway |
SCHAEFFER PROSTATE DEVELOPMENT 6HR UP | 176 | 115 | All SZGR 2.0 genes in this pathway |
RADMACHER AML PROGNOSIS | 78 | 52 | All SZGR 2.0 genes in this pathway |
ZHENG BOUND BY FOXP3 | 491 | 310 | All SZGR 2.0 genes in this pathway |
LIM MAMMARY STEM CELL DN | 428 | 246 | All SZGR 2.0 genes in this pathway |