Search results:
SNP ID | Chr. | Position | A1 | A2 | P | Beta | Func | Gene | Distanceb | Source | eSNP | meSNP | In CNV | In Linkage |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs673604 | chr1 | 35687815 | T | C | 3.08E-4 | 1.067 | intergenic | SFPQ, ZMYM4, | dist=29072; dist=46753 | CV:PheWAS, CV:PGCnp | N | N | N | N |
There is no eQTL for this SNP.
There is no meQTL for this SNP.
Enhancer annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr1 | 35643934 | 35644954 | E067 | 42861 |
chr1 | 35645055 | 35645141 | E067 | 42674 |
chr1 | 35645307 | 35645362 | E067 | 42453 |
chr1 | 35645418 | 35645565 | E067 | 42250 |
chr1 | 35645624 | 35645777 | E067 | 42038 |
chr1 | 35645784 | 35645992 | E067 | 41823 |
chr1 | 35646072 | 35646178 | E067 | 41637 |
chr1 | 35646397 | 35646653 | E067 | 41162 |
chr1 | 35646720 | 35646837 | E067 | 40978 |
chr1 | 35646851 | 35646951 | E067 | 40864 |
chr1 | 35647466 | 35647540 | E067 | 40275 |
chr1 | 35647549 | 35647651 | E067 | 40164 |
chr1 | 35647692 | 35647778 | E067 | 40037 |
chr1 | 35648058 | 35648191 | E067 | 39624 |
chr1 | 35648556 | 35648606 | E067 | 39209 |
chr1 | 35648632 | 35648672 | E067 | 39143 |
chr1 | 35650148 | 35650202 | E067 | 37613 |
chr1 | 35650241 | 35650298 | E067 | 37517 |
chr1 | 35650521 | 35650585 | E067 | 37230 |
chr1 | 35650636 | 35650724 | E067 | 37091 |
chr1 | 35650829 | 35650869 | E067 | 36946 |
chr1 | 35651073 | 35651212 | E067 | 36603 |
chr1 | 35651394 | 35651480 | E067 | 36335 |
chr1 | 35651665 | 35651816 | E067 | 35999 |
chr1 | 35651888 | 35651938 | E067 | 35877 |
chr1 | 35652060 | 35652124 | E067 | 35691 |
chr1 | 35652185 | 35652425 | E067 | 35390 |
chr1 | 35652603 | 35652680 | E067 | 35135 |
chr1 | 35652776 | 35652840 | E067 | 34975 |
chr1 | 35653598 | 35653714 | E067 | 34101 |
chr1 | 35653848 | 35653931 | E067 | 33884 |
chr1 | 35653995 | 35654158 | E067 | 33657 |
chr1 | 35654204 | 35654264 | E067 | 33551 |
chr1 | 35654396 | 35654464 | E067 | 33351 |
chr1 | 35654596 | 35654855 | E067 | 32960 |
chr1 | 35655023 | 35655106 | E067 | 32709 |
chr1 | 35736521 | 35736571 | E067 | 48706 |
chr1 | 35643934 | 35644954 | E068 | 42861 |
chr1 | 35645055 | 35645141 | E068 | 42674 |
chr1 | 35645307 | 35645362 | E068 | 42453 |
chr1 | 35645418 | 35645565 | E068 | 42250 |
chr1 | 35645624 | 35645777 | E068 | 42038 |
chr1 | 35645784 | 35645992 | E068 | 41823 |
chr1 | 35646072 | 35646178 | E068 | 41637 |
chr1 | 35646397 | 35646653 | E068 | 41162 |
chr1 | 35646720 | 35646837 | E068 | 40978 |
chr1 | 35646851 | 35646951 | E068 | 40864 |
chr1 | 35648556 | 35648606 | E068 | 39209 |
chr1 | 35648632 | 35648672 | E068 | 39143 |
chr1 | 35649120 | 35649160 | E068 | 38655 |
chr1 | 35649277 | 35649327 | E068 | 38488 |
chr1 | 35649379 | 35649639 | E068 | 38176 |
chr1 | 35652060 | 35652124 | E068 | 35691 |
chr1 | 35652185 | 35652425 | E068 | 35390 |
chr1 | 35652603 | 35652680 | E068 | 35135 |
chr1 | 35652776 | 35652840 | E068 | 34975 |
chr1 | 35653598 | 35653714 | E068 | 34101 |
chr1 | 35653848 | 35653931 | E068 | 33884 |
chr1 | 35653995 | 35654158 | E068 | 33657 |
chr1 | 35654204 | 35654264 | E068 | 33551 |
chr1 | 35654396 | 35654464 | E068 | 33351 |
chr1 | 35654596 | 35654855 | E068 | 32960 |
chr1 | 35667655 | 35668280 | E068 | 19535 |
chr1 | 35736521 | 35736571 | E068 | 48706 |
chr1 | 35643934 | 35644954 | E069 | 42861 |
chr1 | 35645055 | 35645141 | E069 | 42674 |
chr1 | 35645307 | 35645362 | E069 | 42453 |
chr1 | 35645418 | 35645565 | E069 | 42250 |
chr1 | 35645624 | 35645777 | E069 | 42038 |
chr1 | 35645784 | 35645992 | E069 | 41823 |
chr1 | 35646072 | 35646178 | E069 | 41637 |
chr1 | 35646397 | 35646653 | E069 | 41162 |
chr1 | 35646720 | 35646837 | E069 | 40978 |
chr1 | 35646851 | 35646951 | E069 | 40864 |
chr1 | 35650148 | 35650202 | E069 | 37613 |
chr1 | 35650241 | 35650298 | E069 | 37517 |
chr1 | 35650521 | 35650585 | E069 | 37230 |
chr1 | 35650636 | 35650724 | E069 | 37091 |
chr1 | 35650829 | 35650869 | E069 | 36946 |
chr1 | 35651073 | 35651212 | E069 | 36603 |
chr1 | 35651394 | 35651480 | E069 | 36335 |
chr1 | 35651665 | 35651816 | E069 | 35999 |
chr1 | 35651888 | 35651938 | E069 | 35877 |
chr1 | 35652060 | 35652124 | E069 | 35691 |
chr1 | 35652185 | 35652425 | E069 | 35390 |
chr1 | 35652603 | 35652680 | E069 | 35135 |
chr1 | 35652776 | 35652840 | E069 | 34975 |
chr1 | 35653598 | 35653714 | E069 | 34101 |
chr1 | 35653848 | 35653931 | E069 | 33884 |
chr1 | 35653995 | 35654158 | E069 | 33657 |
chr1 | 35654204 | 35654264 | E069 | 33551 |
chr1 | 35654396 | 35654464 | E069 | 33351 |
chr1 | 35654596 | 35654855 | E069 | 32960 |
chr1 | 35655023 | 35655106 | E069 | 32709 |
chr1 | 35655268 | 35655336 | E069 | 32479 |
chr1 | 35667655 | 35668280 | E069 | 19535 |
chr1 | 35675830 | 35676630 | E069 | 11185 |
chr1 | 35736521 | 35736571 | E069 | 48706 |
chr1 | 35646072 | 35646178 | E070 | 41637 |
chr1 | 35646397 | 35646653 | E070 | 41162 |
chr1 | 35646720 | 35646837 | E070 | 40978 |
chr1 | 35646851 | 35646951 | E070 | 40864 |
chr1 | 35647466 | 35647540 | E070 | 40275 |
chr1 | 35647549 | 35647651 | E070 | 40164 |
chr1 | 35647692 | 35647778 | E070 | 40037 |
chr1 | 35648058 | 35648191 | E070 | 39624 |
chr1 | 35648556 | 35648606 | E070 | 39209 |
chr1 | 35648632 | 35648672 | E070 | 39143 |
chr1 | 35649120 | 35649160 | E070 | 38655 |
chr1 | 35649277 | 35649327 | E070 | 38488 |
chr1 | 35649379 | 35649639 | E070 | 38176 |
chr1 | 35650057 | 35650107 | E070 | 37708 |
chr1 | 35650148 | 35650202 | E070 | 37613 |
chr1 | 35650241 | 35650298 | E070 | 37517 |
chr1 | 35650521 | 35650585 | E070 | 37230 |
chr1 | 35651665 | 35651816 | E070 | 35999 |
chr1 | 35651888 | 35651938 | E070 | 35877 |
chr1 | 35652060 | 35652124 | E070 | 35691 |
chr1 | 35652185 | 35652425 | E070 | 35390 |
chr1 | 35652603 | 35652680 | E070 | 35135 |
chr1 | 35652776 | 35652840 | E070 | 34975 |
chr1 | 35653598 | 35653714 | E070 | 34101 |
chr1 | 35653848 | 35653931 | E070 | 33884 |
chr1 | 35653995 | 35654158 | E070 | 33657 |
chr1 | 35654204 | 35654264 | E070 | 33551 |
chr1 | 35654396 | 35654464 | E070 | 33351 |
chr1 | 35666820 | 35667036 | E070 | 20779 |
chr1 | 35667042 | 35667102 | E070 | 20713 |
chr1 | 35667352 | 35667406 | E070 | 20409 |
chr1 | 35667655 | 35668280 | E070 | 19535 |
chr1 | 35675830 | 35676630 | E070 | 11185 |
chr1 | 35687031 | 35687159 | E070 | 656 |
chr1 | 35688003 | 35688873 | E070 | 188 |
chr1 | 35688989 | 35689134 | E070 | 1174 |
chr1 | 35736521 | 35736571 | E070 | 48706 |
chr1 | 35643934 | 35644954 | E071 | 42861 |
chr1 | 35645055 | 35645141 | E071 | 42674 |
chr1 | 35645307 | 35645362 | E071 | 42453 |
chr1 | 35645418 | 35645565 | E071 | 42250 |
chr1 | 35645624 | 35645777 | E071 | 42038 |
chr1 | 35645784 | 35645992 | E071 | 41823 |
chr1 | 35646072 | 35646178 | E071 | 41637 |
chr1 | 35646397 | 35646653 | E071 | 41162 |
chr1 | 35646720 | 35646837 | E071 | 40978 |
chr1 | 35646851 | 35646951 | E071 | 40864 |
chr1 | 35648058 | 35648191 | E071 | 39624 |
chr1 | 35648556 | 35648606 | E071 | 39209 |
chr1 | 35650829 | 35650869 | E071 | 36946 |
chr1 | 35651073 | 35651212 | E071 | 36603 |
chr1 | 35652185 | 35652425 | E071 | 35390 |
chr1 | 35652603 | 35652680 | E071 | 35135 |
chr1 | 35652776 | 35652840 | E071 | 34975 |
chr1 | 35653995 | 35654158 | E071 | 33657 |
chr1 | 35654204 | 35654264 | E071 | 33551 |
chr1 | 35654396 | 35654464 | E071 | 33351 |
chr1 | 35654596 | 35654855 | E071 | 32960 |
chr1 | 35655023 | 35655106 | E071 | 32709 |
chr1 | 35667655 | 35668280 | E071 | 19535 |
chr1 | 35675830 | 35676630 | E071 | 11185 |
chr1 | 35645624 | 35645777 | E072 | 42038 |
chr1 | 35645784 | 35645992 | E072 | 41823 |
chr1 | 35646072 | 35646178 | E072 | 41637 |
chr1 | 35646397 | 35646653 | E072 | 41162 |
chr1 | 35646720 | 35646837 | E072 | 40978 |
chr1 | 35648058 | 35648191 | E072 | 39624 |
chr1 | 35650057 | 35650107 | E072 | 37708 |
chr1 | 35650148 | 35650202 | E072 | 37613 |
chr1 | 35650241 | 35650298 | E072 | 37517 |
chr1 | 35650521 | 35650585 | E072 | 37230 |
chr1 | 35650636 | 35650724 | E072 | 37091 |
chr1 | 35650829 | 35650869 | E072 | 36946 |
chr1 | 35651073 | 35651212 | E072 | 36603 |
chr1 | 35651394 | 35651480 | E072 | 36335 |
chr1 | 35651665 | 35651816 | E072 | 35999 |
chr1 | 35651888 | 35651938 | E072 | 35877 |
chr1 | 35652060 | 35652124 | E072 | 35691 |
chr1 | 35652185 | 35652425 | E072 | 35390 |
chr1 | 35652603 | 35652680 | E072 | 35135 |
chr1 | 35652776 | 35652840 | E072 | 34975 |
chr1 | 35654204 | 35654264 | E072 | 33551 |
chr1 | 35654396 | 35654464 | E072 | 33351 |
chr1 | 35654596 | 35654855 | E072 | 32960 |
chr1 | 35655023 | 35655106 | E072 | 32709 |
chr1 | 35675830 | 35676630 | E072 | 11185 |
chr1 | 35645055 | 35645141 | E073 | 42674 |
chr1 | 35645307 | 35645362 | E073 | 42453 |
chr1 | 35645418 | 35645565 | E073 | 42250 |
chr1 | 35645624 | 35645777 | E073 | 42038 |
chr1 | 35645784 | 35645992 | E073 | 41823 |
chr1 | 35646072 | 35646178 | E073 | 41637 |
chr1 | 35646397 | 35646653 | E073 | 41162 |
chr1 | 35646720 | 35646837 | E073 | 40978 |
chr1 | 35646851 | 35646951 | E073 | 40864 |
chr1 | 35650148 | 35650202 | E073 | 37613 |
chr1 | 35650241 | 35650298 | E073 | 37517 |
chr1 | 35650521 | 35650585 | E073 | 37230 |
chr1 | 35650636 | 35650724 | E073 | 37091 |
chr1 | 35650829 | 35650869 | E073 | 36946 |
chr1 | 35651073 | 35651212 | E073 | 36603 |
chr1 | 35651394 | 35651480 | E073 | 36335 |
chr1 | 35651665 | 35651816 | E073 | 35999 |
chr1 | 35651888 | 35651938 | E073 | 35877 |
chr1 | 35652060 | 35652124 | E073 | 35691 |
chr1 | 35652185 | 35652425 | E073 | 35390 |
chr1 | 35653598 | 35653714 | E073 | 34101 |
chr1 | 35653848 | 35653931 | E073 | 33884 |
chr1 | 35653995 | 35654158 | E073 | 33657 |
chr1 | 35654204 | 35654264 | E073 | 33551 |
chr1 | 35654396 | 35654464 | E073 | 33351 |
chr1 | 35654596 | 35654855 | E073 | 32960 |
chr1 | 35655023 | 35655106 | E073 | 32709 |
chr1 | 35667655 | 35668280 | E073 | 19535 |
chr1 | 35645784 | 35645992 | E074 | 41823 |
chr1 | 35646072 | 35646178 | E074 | 41637 |
chr1 | 35646397 | 35646653 | E074 | 41162 |
chr1 | 35646720 | 35646837 | E074 | 40978 |
chr1 | 35646851 | 35646951 | E074 | 40864 |
chr1 | 35648058 | 35648191 | E074 | 39624 |
chr1 | 35648556 | 35648606 | E074 | 39209 |
chr1 | 35651665 | 35651816 | E074 | 35999 |
chr1 | 35651888 | 35651938 | E074 | 35877 |
chr1 | 35652060 | 35652124 | E074 | 35691 |
chr1 | 35653598 | 35653714 | E074 | 34101 |
chr1 | 35653848 | 35653931 | E074 | 33884 |
chr1 | 35653995 | 35654158 | E074 | 33657 |
chr1 | 35654204 | 35654264 | E074 | 33551 |
chr1 | 35654396 | 35654464 | E074 | 33351 |
chr1 | 35654596 | 35654855 | E074 | 32960 |
chr1 | 35655023 | 35655106 | E074 | 32709 |
chr1 | 35655268 | 35655336 | E074 | 32479 |
chr1 | 35655572 | 35655720 | E074 | 32095 |
chr1 | 35655841 | 35655892 | E074 | 31923 |
chr1 | 35667655 | 35668280 | E074 | 19535 |
chr1 | 35645418 | 35645565 | E081 | 42250 |
chr1 | 35651665 | 35651816 | E081 | 35999 |
chr1 | 35651888 | 35651938 | E081 | 35877 |
chr1 | 35652060 | 35652124 | E081 | 35691 |
chr1 | 35652185 | 35652425 | E081 | 35390 |
chr1 | 35652603 | 35652680 | E081 | 35135 |
chr1 | 35652776 | 35652840 | E081 | 34975 |
chr1 | 35654596 | 35654855 | E081 | 32960 |
chr1 | 35655023 | 35655106 | E081 | 32709 |
chr1 | 35655268 | 35655336 | E081 | 32479 |
chr1 | 35667655 | 35668280 | E081 | 19535 |
chr1 | 35688003 | 35688873 | E081 | 188 |
chr1 | 35688989 | 35689134 | E081 | 1174 |
chr1 | 35736521 | 35736571 | E081 | 48706 |
chr1 | 35643934 | 35644954 | E082 | 42861 |
chr1 | 35645055 | 35645141 | E082 | 42674 |
chr1 | 35645307 | 35645362 | E082 | 42453 |
chr1 | 35645418 | 35645565 | E082 | 42250 |
chr1 | 35645624 | 35645777 | E082 | 42038 |
chr1 | 35645784 | 35645992 | E082 | 41823 |
chr1 | 35646072 | 35646178 | E082 | 41637 |
chr1 | 35646397 | 35646653 | E082 | 41162 |
chr1 | 35646720 | 35646837 | E082 | 40978 |
chr1 | 35646851 | 35646951 | E082 | 40864 |
chr1 | 35647466 | 35647540 | E082 | 40275 |
chr1 | 35647549 | 35647651 | E082 | 40164 |
chr1 | 35650057 | 35650107 | E082 | 37708 |
chr1 | 35651665 | 35651816 | E082 | 35999 |
chr1 | 35651888 | 35651938 | E082 | 35877 |
chr1 | 35652060 | 35652124 | E082 | 35691 |
chr1 | 35652185 | 35652425 | E082 | 35390 |
chr1 | 35652603 | 35652680 | E082 | 35135 |
chr1 | 35652776 | 35652840 | E082 | 34975 |
chr1 | 35653995 | 35654158 | E082 | 33657 |
chr1 | 35654204 | 35654264 | E082 | 33551 |
chr1 | 35654396 | 35654464 | E082 | 33351 |
chr1 | 35736521 | 35736571 | E082 | 48706 |
chr1 | 35736662 | 35736733 | E082 | 48847 |
chr1 | 35736816 | 35736903 | E082 | 49001 |
Promoter annotation
Chromosome | Start | End | Region | TSS distance |
---|---|---|---|---|
chr1 | 35657032 | 35659526 | E067 | 28289 |
chr1 | 35733859 | 35735529 | E067 | 46044 |
chr1 | 35657032 | 35659526 | E068 | 28289 |
chr1 | 35733859 | 35735529 | E068 | 46044 |
chr1 | 35657032 | 35659526 | E069 | 28289 |
chr1 | 35733859 | 35735529 | E069 | 46044 |
chr1 | 35657032 | 35659526 | E070 | 28289 |
chr1 | 35733859 | 35735529 | E070 | 46044 |
chr1 | 35657032 | 35659526 | E071 | 28289 |
chr1 | 35733859 | 35735529 | E071 | 46044 |
chr1 | 35657032 | 35659526 | E072 | 28289 |
chr1 | 35733859 | 35735529 | E072 | 46044 |
chr1 | 35657032 | 35659526 | E073 | 28289 |
chr1 | 35733859 | 35735529 | E073 | 46044 |
chr1 | 35657032 | 35659526 | E074 | 28289 |
chr1 | 35733859 | 35735529 | E074 | 46044 |
chr1 | 35733859 | 35735529 | E081 | 46044 |
chr1 | 35657032 | 35659526 | E082 | 28289 |
chr1 | 35733859 | 35735529 | E082 | 46044 |