Search results: The pahtway p1566 has 341 genes in the original annotation. Currently, there are 197 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10730YME1L1FTSH | MEG4 | PAMP | YME1LYME1 like 1 ATPase10p14CV:PGCnp
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
3416IDEINSULYSINinsulin degrading enzyme10q23-q25CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
27069GHITMDERP2 | HSPC282 | MICS1 | My021 | PTD010 | TMBIM5growth hormone inducible transmembrane protein10q23.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
4607MYBPC3CMD1MM | CMH4 | FHC | LVNC10 | MYBP-Cmyosin binding protein C, cardiac11p11.2CV:PGCnp
5913RAPSNCMS11 | CMS4C | FADS | RAPSYN | RNF205receptor associated protein of the synapse11p11.2CV:PGCnp
GO_Annotation
53ACP2LAPacid phosphatase 2, lysosomal11p11.2|11p12-p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7189TRAF6MGC:3310 | RNF85TNF receptor associated factor 611p12CV:PGCnp
GO_Annotation
Network
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
5331PLCB3-phospholipase C beta 311q13CV:PGCnp
DMG:Wockner_2014
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
472ATMAT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1ATM serine/threonine kinase11q22-q23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Ascano FMRP targets
6484ST3GAL4CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZST3 beta-galactoside alpha-2,3-sialyltransferase 411q24.2CV:PGCnp
80071CCDC15-coiled-coil domain containing 1511q24.2CV:PGCnp
65981CAPRIN2C1QDC1 | EEG-1 | EEG1 | RNG140caprin family member 212p11CV:PGCnp
5139PDE3ACGI-PDE | CGI-PDE A | CGI-PDE-A | HTNBphosphodiesterase 3A12p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
65125WNK1HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65WNK lysine deficient protein kinase 112p13.3CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
25840METTL7AAAM-Bmethyltransferase like 7A12q13.12CV:PGCnp
DEG:Zhao_2015
Expression
8092ALX1CART1 | FND3 | HEL23ALX homeobox 112q21.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5781PTPN11BPTP3 | CFC | JMML | METCDS | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2protein tyrosine phosphatase, non-receptor type 1112q24CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5564PRKAB1AMPK | HAMPKbprotein kinase AMP-activated non-catalytic subunit beta 112q24.1-q24.3CV:PGCnp
Network
PMID:cooccur
10993SDSSDHserine dehydratase12q24.13CV:PGCnp
PMID:cooccur
79676OGFOD2-2-oxoglutarate and iron dependent oxygenase domain containing 212q24.31CV:PGCnp
LK:YES
10186LHFP-lipoma HMGIC fusion partner13q12CV:PGCnp
DMG:Nishioka_2013
54737MPHOSPH8HSMPP8 | TWA3 | mpp8M-phase phosphoprotein 813q12.11CV:PGCnp
DMG:Jaffe_2016
283537SLC46A3FKSG16solute carrier family 46 member 313q12.3CV:PGCnp
DMG:Jaffe_2016
23047PDS5BAPRIN | AS3 | CG008PDS5 cohesin associated factor B13q12.3CV:PGCnpCompositeSet
Darnell FMRP targets
10129FRY13CDNA73 | 214K23.2 | C13orf14 | CG003 | bA207N4.2 | bA37E23.1FRY microtubule binding protein13q13.1CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
10150MBNL2MBLL | MBLL39 | PRO2032muscleblind like splicing regulator 213q32.1CV:GWASdb
CV:PGCnp
23348DOCK9ZIZ1 | ZIZIMIN1dedicator of cytokinesis 913q32.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10876EDDM3AEP3A | FAM12A | HE3-ALPHA | HE3A | HE3ALPHA | RAM1epididymal protein 3A14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
64582GPR135HUMNPIIY20G protein-coupled receptor 13514q23.1CV:PGCnp
4990SIX6MCOPCT2 | ODRMD | OPTX2 | Six9SIX homeobox 614q23.1CV:PGCnp
DMG:Jaffe_2016
3320HSP90AA1EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2heat shock protein 90kDa alpha family class A member 114q32.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
81614NIPA2-non imprinted in Prader-Willi/Angelman syndrome 215q11.2CV:PGCnp
Expression
PMID:cooccur
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
10116FEM1BF1A-ALPHA | F1AA | FEM1-betafem-1 homolog b (C. elegans)15q22DMG:Nishioka_2013
771CA12CA-XII | CAXII | HsT18816 | T18816carbonic anhydrase XII15q22CV:PGCnp
DMG:Wockner_2014
54939COMMD4-COMM domain containing 415q24.2CV:PGCnp
DMG:Wockner_2014
28232SLCO3A1OATP-D | OATP3A1 | OATPD | SLC21A11solute carrier organic anion transporter family member 3A115q26CV:GWAScat
CV:PGCnp
PMID:cooccur
1133CHRM5HM5cholinergic receptor muscarinic 515q26ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
PMID:cooccur
4122MAN2A2MANA2Xmannosidase alpha class 2A member 215q26.1CV:PGCnpCompositeSet
Darnell FMRP targets
11057ABHD2HS1-2 | LABH2 | PHPS1-2abhydrolase domain containing 215q26.1CV:PGCnp
Expression
80213TM2D3BLP2TM2 domain containing 315q26.3CV:PGCnp
3835KIF22A-328A3.2 | KID | KNSL4 | OBP | OBP-1 | OBP-2 | SEMDJL2kinesin family member 2216p11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
79724ZNF768-zinc finger protein 76816p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
3687ITGAXCD11C | SLEB6integrin subunit alpha X16p11.2CV:PGCnp
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
64718UNKLC16orf28 | ZC3H5L | ZC3HDC5Lunkempt family like zinc finger16p13.3CV:PGCnp
DMG:Montano_2016
Ascano FMRP targets
23594ORC6ORC6Lorigin recognition complex subunit 616q12CV:PGCnp
GSMA_IIE
113ADCY7AC7adenylate cyclase 716q12.1CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
6483ST3GAL2Gal-NAc6S | SIAT4B | ST3GALII | ST3GalA.2ST3 beta-galactoside alpha-2,3-sialyltransferase 216q22.1CV:PGCnp
DMG:Wockner_2014
766CA7CAVIIcarbonic anhydrase VII16q22.1CV:PGCnp
DMG:Jaffe_2016
64174DPEP2MBD2dipeptidase 216q22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
6687SPG7CAR | CMAR | PGN | SPG5CSPG7, paraplegin matrix AAA peptidase subunit16q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2175FANCAFA | FA-H | FA1 | FAA | FACA | FAH | FANCHFanconi anemia complementation group A16q24.3CV:PGCnp
4641MYO1CMMI-beta | MMIb | NMI | myr2myosin IC17p13.3CV:PGCnpAscano FMRP targets
8851CDK5R1CDK5P35 | CDK5R | NCK5A | p23 | p25 | p35 | p35nck5acyclin-dependent kinase 5, regulatory subunit 1 (p35)17q11.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3213HOXB3HOX2 | HOX2G | Hox-2.7homeobox B317q21.3CV:PGCnp
DMG:Wockner_2014
3219HOXB9HOX-2.5 | HOX2 | HOX2Ehomeobox B917q21.3CV:PGCnp
DMG:Wockner_2014
Expression
3212HOXB2HOX2 | HOX2H | Hox-2.8 | K8homeobox B217q21.32CV:PGCnp
DMG:Wockner_2014
4772NFATC1NF-ATC | NF-ATc1.2 | NFAT2 | NFATcnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 118q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
Network
6455SH3GL1CNSA1 | EEN | SH3D2B | SH3P8SH3-domain GRB2-like 119p13.3CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
23217ZFR2KIAA1086zinc finger RNA binding protein 219p13.3PMID:cooccur
22809ATF5ATFX | HMFN0395activating transcription factor 519q13.3CV:PGCnp
PMID:cooccur
581BAXBCL2L4BCL2-associated X protein19q13.3-q13.4GO_Annotation
PMID:cooccur
6253RTN2NSP2 | NSPL1 | NSPLI | SPG12reticulon 219q13.32DMG:vanEijk_2014
5586PKN2PAK2 | PRK2 | PRKCL2 | PRO2042 | Pak-2 | STK7protein kinase N21p22.2CV:PGCnp
DMG:Nishioka_2013
1491CTH-cystathionine gamma-lyase1p31.1CV:GWAScat
CV:PGCnp
GSMA_IIA
PMID:cooccur
54741LEPROTLEPR | OB-RGRP | OBRGRP | VPS55leptin receptor overlapping transcript1p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
5453POU3F1OCT6 | OTF6 | SCIPPOU class 3 homeobox 11p34.1CV:PGCnp
GO_Annotation
PMID:cooccur
63967CLSPN-claspin1p34.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
27095TRAPPC3BET3trafficking protein particle complex 31p34.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5511PPP1R8ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047protein phosphatase 1 regulatory subunit 81p35.3CV:PGCnp
DMG:Wockner_2014
11079RER1-retention in endoplasmic reticulum sorting receptor 11p36CV:PGCnp
65018PINK1BRPK | PARK6PTEN induced putative kinase 11p36DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
54455FBXO42Fbx42 | JFKF-box protein 421p36.23-p36.11CV:PGCnp
27173SLC39A1ZIP1 | ZIRTLsolute carrier family 39 member 11q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10401PIAS3ZMIZ5protein inhibitor of activated STAT 31q21CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
9826ARHGEF11GTRAP48 | PDZ-RHOGEFRho guanine nucleotide exchange factor 111q21CV:PGCnp
DNM:Fromer_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5298PI4KBNPIK | PI4K-BETA | PI4K92 | PI4KBETA | PI4KIIIBETA | PIK4CBphosphatidylinositol 4-kinase beta1q21CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
1401CRPPTX1C-reactive protein, pentraxin-related1q23.2CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
54499TMCO1HP10122 | PCIA3 | PNAS-136 | TMCC4transmembrane and coiled-coil domains 11q24.1CV:PGCnp
PMID:cooccur
10228STX6-syntaxin 61q25.3CV:PGCnp
CV:PheWAS
DEG:Sanders_2013
INTRACELLULAR TRAFFICKING
5321PLA2G4APLA2G4 | cPLA2 | cPLA2-alphaphospholipase A2 group IVA1q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
9580SOX13ICA12 | Sox-13SRY-box 131q32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
7107GPR137BTM7SF1G protein-coupled receptor 137B1q42-q43CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23219FBXO28CENP-30 | Fbx28F-box protein 281q42.11CV:PGCnp
1114CHGBSCG1chromogranin B20p12.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
7529YWHABGW128 | HEL-S-1 | HS1 | KCIP-1 | YWHAAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta20q13.1CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10955SERINC3AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1serine incorporator 320q13.12DMG:Jaffe_2016
4685NCAM2NCAM21neural cell adhesion molecule 221q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6651SONBASS1 | C21orf50 | DBP-5 | NREBP | SON3SON DNA binding protein21q22.11CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
5316PKNOX1PREP1 | pkonx1cPBX/knotted 1 homeobox 121q22.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
7263TSTRDSthiosulfate sulfurtransferase22q13.1CV:PGCnp
PMID:cooccur
8911CACNA1ICav3.3 | ca(v)3.3calcium voltage-gated channel subunit alpha1 I22q13.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
2847MCHR1GPR24 | MCH-1R | MCH1R | SLC-1 | SLC1melanin concentrating hormone receptor 122q13.2Association
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
50ACO2ACONM | HEL-S-284 | ICRD | OCA8 | OPA9aconitase 222q13.2CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9889ZBED4-zinc finger BED-type containing 422q13.33CV:GWASdb
CV:PGCnp
PMID:cooccur
4211MEIS1-Meis homeobox 12p14CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
238ALKCD246 | NBLST3anaplastic lymphoma receptor tyrosine kinase2p23Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
60509AGBL5CCP5ATP/GTP binding protein-like 52p23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
64080RBKSRBSKribokinase2p23.3CV:PGCnp
DMG:Wockner_2014
3790KCNS3KV9.3potassium voltage-gated channel modifier subfamily S member 32p24CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
PMID:cooccur
3987LIMS1PINCH | PINCH-1 | PINCH1LIM zinc finger domain containing 12q12.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
5775PTPN4MEG | PTPMEG | PTPMEG1protein tyrosine phosphatase, non-receptor type 42q14.2CV:PGCnp
GSMA_I
GSMA_IIA
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10010TANKI-TRAF | ITRAF | TRAF2TRAF family member associated NFKB activator2q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
Network
PMID:cooccur
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
9874TLK1PKU-betatousled like kinase 12q31.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
79054TRPM8LTRPC6 | TRPP8transient receptor potential cation channel subfamily M member 82q37.1CV:GWASdb
CV:PGCnp
23429RYBPAAP1 | APAP-1 | DEDAF | YEAF1RING1 and YY1 binding protein3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
10425ARIH2ARI2 | TRIAD1ariadne RBR E3 ubiquitin protein ligase 23p21CV:PGCnp
Network
7474WNT5AhWNT5Awingless-type MMTV integration site family member 5A3p21-p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10181RBM5G15 | H37 | LUCA15 | RMB5RNA binding motif protein 53p21.3CV:PGCnpAscano FMRP targets
10217CTDSPLC3orf8 | HYA22 | PSR1 | RBSP3 | SCP3CTD small phosphatase like3p21.3CV:PGCnp
GSMA_I
9807IP6K1IHPK1 | PiUSinositol hexakisphosphate kinase 13p21.31CV:PGCnp
64925CCDC71-coiled-coil domain containing 713p21.31CV:PGCnp
6565SLC15A2PEPT2solute carrier family 15 member 23q13.33CV:PGCnp
Expression
51319RSRC1BM-011 | SFRS21 | SRrp53arginine/serine-rich coiled-coil 13q25.32CV:PGCnp
PMID:cooccur
29970SCHIP1SCHIP-1schwannomin interacting protein 13q25.32-q25.33CV:PGCnp
DMG:Wockner_2014
3840KPNA4IPOA3 | QIP1 | SRP3karyopherin subunit alpha 43q25.33CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
131408FAM131AC3orf40 | FLAT715 | PRO1378family with sequence similarity 131 member A3q27.1DMG:Wockner_2014
10644IGF2BP2IMP-2 | IMP2 | VICKZ2insulin like growth factor 2 mRNA binding protein 23q27.2CV:PGCnp
PMID:cooccur
1608DGKGDAGK3 | DGK-GAMMAdiacylglycerol kinase gamma3q27.2-q27.3CV:GWASdb
CV:PGCnp
3093UBE2KE2-25K | HIP2 | HYPG | LIG | UBC1ubiquitin conjugating enzyme E2 K4p14CV:PGCnp
PMID:cooccur
10891PPARGC1ALEM6 | PGC-1(alpha) | PGC-1alpha | PGC-1v | PGC1 | PGC1A | PPARGC1PPARG coactivator 1 alpha4p15.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
23231SEL1L3Sel-1L3SEL1L family member 34p15.2CV:PGCnp
CV:PheWAS
6452SH3BP23BP-2 | 3BP2 | CRBM | CRPM | RES4-23SH3-domain binding protein 24p16.3CV:PGCnp
DMG:Wockner_2014
23142DCUN1D4-defective in cullin neddylation 1 domain containing 44q12CV:PGCnp
DMG:Wockner_2014
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
7366UGT2B15HLUG4 | UDPGT 2B8 | UDPGT2B15 | UDPGTH3 | UGT2B8UDP glucuronosyltransferase family 2 member B154q13DMG:Wockner_2014
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
2798GNRHRGNRHR1 | GRHR | HH7 | LHRHR | LRHRgonadotropin releasing hormone receptor4q21.2CV:PGCnp
10611PDLIM5ENH | ENH1 | L9 | LIMPDZ and LIM domain 54q22Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
25836NIPBLCDLS | CDLS1 | IDN3 | IDN3-B | Scc2Nipped-B homolog (Drosophila)5p13.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
90355C5orf30-chromosome 5 open reading frame 305q21.1CV:GWASdb
CV:PGCnp
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23176SEPT8SEP2septin 85q31CV:PGCnp
DEG:Maycox_2009
GSMA_I
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
11127KIF3AFLA10 | KLP-20kinesin family member 3A5q31CV:PGCnp
GSMA_I
PMID:cooccur
4238MFAP3-microfibrillar associated protein 35q32-q33.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
28978TMEM14AC6orf73 | PTD011transmembrane protein 14A6p12.2CV:PGCnp
GSMA_IIE
23304UBR2C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3ubiquitin protein ligase E3 component n-recognin 26p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
11074TRIM31C6orf13 | HCG1 | HCGI | RNFtripartite motif containing 316p21.3CV:GWASdb
CV:PGCnp
GSMA_I
10475TRIM38RNF15 | RORETtripartite motif containing 386p21.3CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
3077HFEHFE1 | HH | HLA-H | MVCD7 | TFQTL2hemochromatosis6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
8357HIST1H3HH3/k | H3F1K | H3FKhistone cluster 1, H3h6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
51389RWDD1CGI-24 | PTD013RWD domain containing 16q13-q22.33CV:GWASdb
CV:PGCnp
1268CNR1CANN6 | CB-R | CB1 | CB1A | CB1K5 | CB1R | CNRcannabinoid receptor 1 (brain)6q14-q15Association
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
CANABINOID
GPCR SIGNALLING
6885MAP3K7MEKK7 | TAK1 | TGF1amitogen-activated protein kinase kinase kinase 76q15CV:PGCnp
DMG:Jaffe_2016
Network
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
54806AHI1AHI-1 | JBTS3 | ORF1 | dJ71N10.1Abelson helper integration site 16q23.3Association
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
PMID:cooccur
Ascano FMRP targets
348995NUP43bA350J20.1 | p42nucleoporin 43kDa6q25.1CV:PGCnp
81552VOPP1ECOP | GASPvesicular, overexpressed in cancer, prosurvival protein 17p11.2CV:PGCnp
DEG:Maycox_2009
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
54504CPVLHVLPcarboxypeptidase, vitellogenic like7p15.1CV:PGCnp
GO_Annotation
PMID:cooccur
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
2768GNA12NNX3 | RMP | gepG protein subunit alpha 127p22.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G-PROTEIN RELAY
Ascano FMRP targets
781CACNA2D1CACNA2 | CACNL2A | CCHL2A | LINC01112 | lncRNA-N3calcium voltage-gated channel auxiliary subunit alpha2delta 17q21-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
349152DPY19L2P2-DPY19L2 pseudogene 27q22.1CV:PGCnp
DMG:Jaffe_2016
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5506PPP1R3AGM | PP1G | PPP1R3protein phosphatase 1 regulatory subunit 3A7q31.1CV:PGCnp
4850CNOT4CLONE243 | NOT4 | NOT4HCCR4-NOT transcription complex subunit 47q33CV:PGCnp
DMG:Nishioka_2013
2041EPHA1EPH | EPHT | EPHT1EPH receptor A17q34DMG:Wockner_2014
6604SMARCD3BAF60C | CRACD3 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 37q35-q36CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
5533PPP3CCCALNA3 | CNA3 | PP2Bgammaprotein phosphatase 3 catalytic subunit gamma8p21.3Association
Core
CV:PGCnp
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
2055CLN8C8orf61 | EPMRceroid-lipofuscinosis, neuronal 88p23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
54512EXOSC4RRP41 | RRP41A | Rrp41p | SKI6 | Ski6p | hRrp41p | p12Aexosome component 48q24.3DMG:Wockner_2014
Expression
7415VCPALS14 | CMT2Y | HEL-220 | HEL-S-70 | IBMPFD | IBMPFD1 | TERA | p97valosin containing protein9p13.3CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
54840APTXAOA | AOA1 | AXA1 | EAOH | EOAHA | FHA-HITaprataxin9p13.3CV:PGCnp
48ACO1ACONS | HEL60 | IREB1 | IREBP | IREBP1 | IRP1aconitase 19p21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9414TJP2C9DUPq21.11 | DFNA51 | DUP9q21.11 | PFIC4 | X104 | ZO2tight junction protein 29q13-q21CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
9568GABBR2GABABR2 | GPR51 | GPRC3B | HG20 | HRIHFB2099gamma-aminobutyric acid type B receptor subunit 29q22.1-q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
23071ERP44PDIA10 | TXNDC4endoplasmic reticulum protein 449q31.1CV:PGCnp
259AMBPA1M | EDC1 | HCP | HI30 | IATIL | ITI | ITIL | ITILC | UTIalpha-1-microglobulin/bikunin precursor9q32-q33CV:GWASdb
5090PBX3-pre-B-cell leukemia homeobox 39q33.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
9858PPP1R26KIAA0649protein phosphatase 1 regulatory subunit 269q34.3CV:PGCnp
2710GKGK1 | GKDglycerol kinaseXp21.3CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
CELL METABOLISM
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
2747GLUD2GDH2 | GLUDP1glutamate dehydrogenase 2Xq24-q25CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes