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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group ? | Functional group ? |
|---|---|---|---|---|---|---|
| 648 | BMI1 | FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1 | BMI1 proto-oncogene, polycomb ring finger | 10p11.23 | PMID:cooccur | Chromatin Remodeling Genes |
| 406 | ARNTL | BMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5 | aryl hydrocarbon receptor nuclear translocator like | 11p15 | CV:GWAScat CV:GWASdb CV:PGCnp PMID:cooccur | |
| 2237 | FEN1 | FEN-1 | MF1 | RAD2 | flap structure-specific endonuclease 1 | 11q12 | DMG:Nishioka_2013 DMG:Wockner_2014 PMID:cooccur | |
| 25833 | POU2F3 | Epoc-1 | OCT-11 | OCT11 | OTF-11 | PLA-1 | PLA1 | Skn-1a | POU class 2 homeobox 3 | 11q23.3 | CV:PGCnp GSMA_I | |
| 466 | ATF1 | EWS-ATF1 | FUS/ATF-1 | TREB36 | activating transcription factor 1 | 12q13 | CV:PGCnp | |
| 4801 | NFYB | CBF-A | CBF-B | HAP3 | NF-YB | nuclear transcription factor Y subunit beta | 12q23.3 | CV:PGCnp DMG:Jaffe_2016 | |
| 7027 | TFDP1 | DILC | DP1 | DRTF1 | Dp-1 | transcription factor Dp-1 | 13q34 | CV:PGCnp DMG:Wockner_2014 | |
| 5427 | POLE2 | DPE2 | polymerase (DNA) epsilon 2, accessory subunit | 14q21-q22 | CV:PGCnp | |
| 4149 | MAX | bHLHd4 | MYC associated factor X | 14q23 | CV:PGCnp PMID:cooccur | |
| 4091 | SMAD6 | AOVD2 | HsT17432 | MADH6 | MADH7 | SMAD family member 6 | 15q22.31 | CV:PGCnp DMG:Wockner_2014 | |
| 641 | BLM | BS | RECQ2 | RECQL2 | RECQL3 | Bloom syndrome RecQ like helicase | 15q26.1 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur | Ascano FMRP targets |
| 10664 | CTCF | MRD21 | CCCTC-binding factor | 16q22.1 | CV:PGCnp PMID:cooccur | |
| 7014 | TERF2 | TRBF2 | TRF2 | telomeric repeat binding factor 2 | 16q22.1 | CV:PGCnp | |
| 51479 | ANKFY1 | ANKHZN | BTBD23 | ZFYVE14 | ankyrin repeat and FYVE domain containing 1 | 17p13.3 | CV:PGCnp DMG:Jaffe_2016 | CompositeSet Ascano FMRP targets |
| 11232 | POLG2 | HP55 | MTPOLB | PEOA4 | POLB | POLG-BETA | POLGB | polymerase (DNA) gamma 2, accessory subunit | 17q | CV:PGCnp DMG:Jaffe_2016 | |
| 672 | BRCA1 | BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53 | breast cancer 1 | 17q21 | CV:PGCnp DMG:Wockner_2014 Network PMID:cooccur | |
| 7153 | TOP2A | TOP2 | TP2A | topoisomerase (DNA) II alpha | 17q21.2 | CV:PGCnp Network PMID:cooccur | Ascano FMRP targets |
| 6605 | SMARCE1 | BAF57 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | 17q21.2 | CV:PGCnp Network PMID:cooccur | Chromatin Remodeling Genes |
| 9063 | PIAS2 | ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4 | protein inhibitor of activated STAT 2 | 18q21.1 | CV:PGCnp PMID:cooccur | |
| 1786 | DNMT1 | ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaI | DNA (cytosine-5-)-methyltransferase 1 | 19p13.2 | CV:PGCnp DMG:Wockner_2014 DNM:Gulsuner_2013 PMID:cooccur | Ascano FMRP targets Chromatin Remodeling Genes |
| 4784 | NFIX | MRSHSS | NF1A | SOTOS2 | nuclear factor I/X (CCAAT-binding transcription factor) | 19p13.3 | CV:PGCnp DMG:Wockner_2014 | CompositeSet Darnell FMRP targets |
| 29128 | UHRF1 | ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95 | ubiquitin like with PHD and ring finger domains 1 | 19p13.3 | CV:PGCnp DMG:Wockner_2014 | |
| 5424 | POLD1 | CDC2 | CRCS10 | MDPL | POLD | polymerase (DNA) delta 1, catalytic subunit | 19q13.3 | CV:PGCnp DMG:Wockner_2014 Expression | |
| 4802 | NFYC | CBF-C | CBFC | H1TF2A | HAP5 | HSM | NF-YC | nuclear transcription factor Y subunit gamma | 1p32 | CV:GWASdb CV:PGCnp Expression | |
| 7709 | ZBTB17 | MIZ-1 | ZNF151 | ZNF60 | pHZ-67 | zinc finger and BTB domain containing 17 | 1p36.13 | CV:PGCnp DMG:Jaffe_2016 | |
| 8863 | PER3 | GIG13 | period circadian clock 3 | 1p36.23 | Association CV:PGCnp PMID:cooccur | |
| 10401 | PIAS3 | ZMIZ5 | protein inhibitor of activated STAT 3 | 1q21 | CNV:YES GSMA_I GSMA_IIA PMID:cooccur | |
| 5451 | POU2F1 | OCT1 | OTF1 | oct-1B | POU class 2 homeobox 1 | 1q24.2 | CV:PGCnp DMG:Wockner_2014 | |
| 9156 | EXO1 | HEX1 | hExoI | exonuclease 1 | 1q43 | CV:GWASdb CV:PGCnp | |
| 5933 | RBL1 | CP107 | PRB1 | p107 | retinoblastoma-like 1 | 20q11.2 | CV:PGCnp DMG:Jaffe_2016 | |
| 8398 | PLA2G6 | CaI-PLA2 | GVI | INAD1 | IPLA2-VIA | NBIA2 | NBIA2A | NBIA2B | PARK14 | PLA2 | PNPLA9 | iPLA2 | iPLA2beta | phospholipase A2 group VI | 22q13.1 | Association CV:PGCnp GR_Ng GR_WM PMID:cooccur | |
| 1058 | CENPA | CENP-A | CenH3 | centromere protein A | 2p23.3 | CV:PGCnp | |
| 2355 | FOSL2 | FRA2 | FOS like antigen 2 | 2p23.3 | CV:PGCnp DMG:Jaffe_2016 PMID:cooccur | |
| 6670 | SP3 | SPR2 | Sp3 transcription factor | 2q31 | CV:PGCnp Network PMID:cooccur | |
| 6772 | STAT1 | CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91 | signal transducer and activator of transcription 1 | 2q32.2 | CV:PGCnp Network PMID:cooccur | G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.humanPSD G2Cdb.humanPSP |
| 8930 | MBD4 | MED1 | methyl-CpG binding domain 4 DNA glycosylase | 3q21.3 | PMID:cooccur | Chromatin Remodeling Genes |
| 7879 | RAB7A | PRO2706 | RAB7 | RAB7A, member RAS oncogene family | 3q21.3 | CV:PGCnp DMG:Wockner_2014 | INTRACELLULAR TRAFFICKING G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS CompositeSet |
| 9575 | CLOCK | KAT13D | bHLHe8 | clock circadian regulator | 4q12 | Association CV:PGCnp DMG:Wockner_2014 PMID:cooccur | |
| 3148 | HMGB2 | HMG2 | high mobility group box 2 | 4q31 | CV:PGCnp DMG:Nishioka_2013 DMG:vanEijk_2014 PMID:cooccur | |
| 4172 | MCM3 | HCC5 | P1-MCM3 | P1.h | RLFB | minichromosome maintenance complex component 3 | 6p12 | CV:PGCnp DMG:Montano_2016 DMG:Nishioka_2013 GSMA_IIE Network | Ascano FMRP targets |
| 5089 | PBX2 | G17 | HOX12 | PBX2MHC | pre-B-cell leukemia homeobox 2 | 6p21.3 | CV:PGCnp GSMA_I | |
| 5987 | TRIM27 | RFP | RNF76 | tripartite motif containing 27 | 6p22 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation GSMA_I | |
| 11335 | CBX3 | HECH | HP1-GAMMA | HP1Hs-gamma | chromobox 3 | 7p15.2 | CV:PGCnp PMID:cooccur | |
| 4176 | MCM7 | CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104 | minichromosome maintenance complex component 7 | 7q21.3-q22.1 | DMG:Nishioka_2013 DMG:vanEijk_2014 Network PMID:cooccur | Ascano FMRP targets |
| 5078 | PAX4 | KPD | MODY9 | paired box 4 | 7q32 | CV:PGCnp | |
| 2146 | EZH2 | ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | 7q35-q36 | CV:PGCnp DMG:Wockner_2014 Network | Chromatin Remodeling Genes |
| 286 | ANK1 | ANK | SPH1 | SPH2 | ankyrin 1 | 8p11.1 | CV:PGCnp DMG:Wockner_2014 DNM:Fromer_2014 Expression Network | G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS CompositeSet Darnell FMRP targets |
| 5862 | RAB2A | LHX | RAB2 | RAB2A, member RAS oncogene family | 8q12.1 | CV:PGCnp Network PMID:cooccur | INTRACELLULAR TRAFFICKING G2Cdb.human_clathrin G2Cdb.human_Synaptosome G2Cdb.humanNRC G2Cdb.humanPSP Potential synaptic genes |
| 3297 | HSF1 | HSTF1 | heat shock transcription factor 1 | 8q24.3 | CV:PGCnp PMID:cooccur | |
| 8928 | FOXH1 | FAST-1 | FAST1 | forkhead box H1 | 8q24.3 | CV:PGCnp DMG:Jaffe_2016 | |
| 6256 | RXRA | NR2B1 | retinoid X receptor alpha | 9q34.3 | CV:GWAScat CV:PGCnp PMID:cooccur | |