Search results: The pahtway p2109 has 73 genes in the original annotation. Currently, there are 47 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
5920RARRES3HRASLS4 | HRSL4 | PLA1/2-3 | RIG1 | TIG3retinoic acid receptor responder (tazarotene induced) 311q23CV:PGCnp
DMG:Wockner_2014
6653SORL1C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250sortilin-related receptor, L(DLR class) A repeats containing11q23.2-q24.2CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
9052GPRC5AGPCR5A | PEIG-1 | RAI3 | RAIG1 | TIG1G protein-coupled receptor class C group 5 member A12p13.1CV:PGCnp
DMG:Jaffe_2016
4939OAS2-2'-5'-oligoadenylate synthetase 212q24.2CV:GWASdb
CV:PGCnp
8638OASLOASLd | TRIP-14 | TRIP14 | p59 OASL | p59-OASL | p59OASL2'-5'-oligoadenylate synthetase like12q24.2CV:PGCnp
1948EFNB2EPLG5 | HTKL | Htk-L | LERK5ephrin-B213q33CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
4860PNPNP | PRO1837 | PUNPpurine nucleoside phosphorylase14q13.1CV:GWAScat
GSMA_I
Network
PMID:cooccur
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
23002DAAM1-dishevelled associated activator of morphogenesis 114q23.1Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
6652SORDHEL-S-95n | SORD1sorbitol dehydrogenase15q15.3CV:PGCnp
DMG:Wockner_2014
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6376CX3CL1ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactinC-X3-C motif chemokine ligand 116q13CV:PGCnp
PMID:cooccur
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
10982MAPRE2CSCSC2 | EB1 | EB2 | RP1microtubule associated protein RP/EB family member 218q12.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
10964IFI44LC1orf29 | GS3686interferon induced protein 44 like1p31.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
10561IFI44MTAP44 | TLDC5 | p44interferon induced protein 441p31.1CV:PGCnp
GSMA_IIA
4599MX1IFI-78K | IFI78 | MX | MxAMX dynamin like GTPase 121q22.3CV:PGCnp
PMID:cooccur
4600MX2MXBMX dynamin like GTPase 221q22.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
7851MALLBENEmal, T-cell differentiation protein-like2q13CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
590BCHECHE1 | CHE2 | E1butyrylcholinesterase3q26.1-q26.2CV:PGCnp
PMID:cooccur
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
10874NMU-neuromedin U4q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3627CXCL10C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1C-X-C motif chemokine ligand 104q21CV:PGCnp
PMID:cooccur
10855HPSEHPA | HPA1 | HPR1 | HPSE1 | HSE1heparanase4q21.3CV:PGCnp
DMG:Jaffe_2016
10611PDLIM5ENH | ENH1 | L9 | LIMPDZ and LIM domain 54q22Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
55008HERC6-HECT and RLD domain containing E3 ubiquitin protein ligase family member 64q22.1CV:GWASdb
CV:PGCnp
55601DDX60-DEXD/H-box helicase 604q32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
6695SPOCK1SPOCK | TESTICAN | TIC1sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 15q31.2CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
10371SEMA3ACOLL1 | HH16 | Hsema-I | Hsema-III | SEMA1 | SEMAD | SEMAIII | SEMAL | SemD | coll-1semaphorin 3A7p12.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5764PTNHARP | HBGF8 | HBNF | NEGF1pleiotrophin7q33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Potential synaptic genes
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
3620IDO1IDO | IDO-1 | INDOindoleamine 2,3-dioxygenase 18p11.21PMID:cooccur
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
4856NOVCCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVhnephroblastoma overexpressed8q24.1PMID:cooccur
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
7099TLR4ARMD10 | CD284 | TLR-4 | TOLLtoll like receptor 49q33.1CV:PGCnp
PMID:cooccur
4693NDPEVR2 | FEVR | NDNorrie disease (pseudoglioma)Xp11.4CV:PGCnp
GO_Annotation
PMID:cooccur