Search results: The pahtway p2268 has 779 genes in the original annotation. Currently, there are 481 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
8872CDC123C10orf7 | D123cell division cycle 12310p13CV:PGCnp
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
23185LARP4BKIAA0217 | LARP5La ribonucleoprotein domain family member 4B10p15.3CV:PGCnp
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
7570ZNF22HKR-T1 | KOX15 | ZNF422 | Zfp422zinc finger protein 2210q11CV:PGCnp
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
56681SAR1ASAR1 | SARA1 | Sara | masra2secretion associated Ras related GTPase 1A10q22.1CV:PGCnp
DMG:Nishioka_2013
Network
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
10285SMNDC1SMNR | SPF30 | TDRD16Csurvival motor neuron domain containing 110q23CV:PGCnp
DMG:Jaffe_2016
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
2253FGF8AIGF | FGF-8 | HBGF-8 | HH6 | KAL6fibroblast growth factor 810q24CV:PGCnp
PMID:cooccur
5076PAX2FSGS7 | PAPRSpaired box 210q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
1147CHUKIKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16conserved helix-loop-helix ubiquitous kinase10q24-q25CV:PGCnp
Network
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
10360NPM3PORMIN | TMEM123nucleophosmin/nucleoplasmin 310q24.31CV:PGCnp
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6001RGS10-regulator of G-protein signaling 1010q25CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10935PRDX3AOP-1 | AOP1 | HBC189 | MER5 | PRO1748 | SP-22 | prx-IIIperoxiredoxin 310q25-q26CV:PGCnp
7511XPNPEP1APP1 | SAMP | XPNPEP | XPNPEPL | XPNPEPL1X-prolyl aminopeptidase (aminopeptidase P) 1, soluble10q25.3CV:PGCnp
DMG:Jaffe_2016
DNM:McCarthy_2014
Ascano FMRP targets
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
10480EIF3MB5 | GA17 | PCID1 | TANGO7 | hfl-B5eukaryotic translation initiation factor 3 subunit M11p13CV:PGCnp
DMG:Jaffe_2016
120526DNAJC24DPH4 | JJJ3 | ZCSL3DnaJ heat shock protein family (Hsp40) member C2411p13CV:PGCnp
10196PRMT3HRMT1L3protein arginine methyltransferase 311p15.1CV:PGCnp
DMG:Jaffe_2016
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
9646CTR9SH2BP1 | TSBP | p150 | p150TSPCTR9 homolog, Paf1/RNA polymerase II complex component11p15.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
3939LDHAGSD11 | HEL-S-133P | LDHM | PIG19lactate dehydrogenase A11p15.4CV:PGCnp
Expression
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4676NAP1L4NAP1L4b | NAP2 | NAP2L | hNAP2nucleosome assembly protein 1 like 411p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
Ascano FMRP targets
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
10978CLP1HEAB | hClp1cleavage and polyadenylation factor I subunit 111q12CV:PGCnp
DMG:Jaffe_2016
6749SSRP1FACT | FACT80 | T160structure specific recognition protein 111q12CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
Chromatin Remodeling Genes
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
1374CPT1ACPT1 | CPT1-L | L-CPT1carnitine palmitoyltransferase 1A11q13.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Expression
PMID:cooccur
10432RBM14COAA | PSP2 | SIP | SYTIP1 | TMEM137RNA binding motif protein 1411q13.2CV:PGCnp
DMG:Nishioka_2013
7481WNT11HWNT11wingless-type MMTV integration site family member 1111q13.5CV:PGCnp
DMG:Jaffe_2016
9702CEP57MVA2 | PIG8 | TSP57centrosomal protein 57kDa11q21CV:PGCnp
1662DDX10HRH-J8DEAD-box helicase 1011q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
472ATMAT1 | ATA | ATC | ATD | ATDC | ATE | TEL1 | TELO1ATM serine/threonine kinase11q22-q23CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
Ascano FMRP targets
1737DLATDLTA | PDC-E2 | PDCE2dihydrolipoamide S-acetyltransferase11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
3845KRASC-K-RAS | CFC2 | K-RAS2A | K-RAS2B | K-RAS4A | K-RAS4B | KI-RAS | KRAS1 | KRAS2 | NS | NS3 | RALD | RASK2Kirsten rat sarcoma viral oncogene homolog12p12.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanPSP
CompositeSet
586BCAT1BCATC | BCT1 | ECA39 | MECA39 | PNAS121 | PP18branched chain amino acid transaminase 112p12.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
2784GNB3-G protein subunit beta 312p13Association
PMID:cooccur
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
6472SHMT2GLYA | HEL-S-51e | SHMTserine hydroxymethyltransferase 212q12-q14CV:GWAScat
CV:PGC128
CV:PGCnp
6602SMARCD1BAF60A | CRACD1 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 112q13-q14CV:PGCnp
Network
Chromatin Remodeling Genes
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
113251LARP4PP13296La ribonucleoprotein domain family member 412q13.12CV:PGCnp
10376TUBA1BK-ALPHA-1tubulin alpha 1b12q13.12CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
7334UBE2NHEL-S-71 | UBC13 | UBCHBEN; UBC13 | UbcH-ben | UbcH13ubiquitin conjugating enzyme E2 N12q22CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
9733SART3DSAP1 | P100 | RP11-13G14 | TIP110 | p110 | p110(nrb)squamous cell carcinoma antigen recognized by T-cells 312q24.1CV:PGCnpAscano FMRP targets
6996TDGhTDGthymine DNA glycosylase12q24.1CV:PGCnp
PMID:cooccur
6128RPL6L6 | SHUJUN-2 | TAXREB107 | TXREB1ribosomal protein L612q24.1CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
8550MAPKAPK5MAPKAP-K5 | MK-5 | MK5 | PRAKmitogen-activated protein kinase-activated protein kinase 512q24.13CV:PGCnp
DMG:Jaffe_2016
605BCL7ABCL7B-cell CLL/lymphoma 7A12q24.13CV:PGCnp
Expression
84900RNFT2TMEM118ring finger protein, transmembrane 212q24.22CV:PGCnp
DMG:Wockner_2014
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
51433ANAPC5APC5anaphase promoting complex subunit 512q24.31CV:PGCnp
DNM:Fromer_2014
CompositeSet
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
5715PSMD9Rpn4 | p27proteasome 26S subunit, non-ATPase 912q24.31-q24.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
6541SLC7A1ATRC1 | CAT-1 | ERR | HCAT1 | REC1Lsolute carrier family 7 member 113q12.3CV:PGCnp
DMG:Wockner_2014
Expression
2971GTF3AAP2 | TFIIIAgeneral transcription factor IIIA13q12.3-q13.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
10301DLEU1BCMS | BCMS1 | DLB1 | DLEU2 | LEU1 | LEU2 | LINC00021 | NCRNA00021 | XTP6deleted in lymphocytic leukemia 1 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7174TPP2TPP-2 | TPPIItripeptidyl peptidase II13q32-q33CV:PGCnp
GO_Annotation
Ascano FMRP targets
3843IPO5IMB3 | KPNB3 | Pse1 | RANBP5 | imp5importin 513q32.2Association
CV:PGCnp
DMG:Jaffe_2016
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
4901NRLD14S46E | NRL-MAF | RP27neural retina leucine zipper14q11.1-q11.2GSMA_I
PMID:cooccur
3183HNRNPCC1 | C2 | HNRNP | HNRPC | SNRPCheterogeneous nuclear ribonucleoprotein C (C1/C2)14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
Potential synaptic genes
5018OXA1LOXA1oxidase (cytochrome c) assembly 1-like14q11.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
5687PSMA6IOTA | PROS27 | p27Kproteasome subunit alpha 614q13CV:GWASdb
CV:PGCnp
Network
11177BAZ1AACF1 | WALp1 | WCRF180 | hACF1bromodomain adjacent to zinc finger domain 1A14q13.2CV:GWASdb
CV:PGCnp
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
27109ATP5SATPW | FB | HSU79253ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B)14q21.3CV:PGCnp
DMG:Jaffe_2016
81542TMX1PDIA11 | TMX | TXNDC | TXNDC1thioredoxin related transmembrane protein 114q22.1CV:PGCnp
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
5684PSMA3HC8 | PSC3proteasome subunit alpha 314q23CV:PGCnp
Network
5529PPP2R5E-protein phosphatase 2 regulatory subunit B', epsilon14q23.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2079ERHDROERenhancer of rudimentary homolog (Drosophila)14q24.1DMG:Nishioka_2013
1743DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
9112MTA1-metastasis associated 114q32.3CV:PGCnp
Network
9556C14orf2MP68 | PLPMchromosome 14 open reading frame 214q32.33CV:PGCnp
3320HSP90AA1EL52 | HEL-S-65p | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP-2 | LAP2heat shock protein 90kDa alpha family class A member 114q32.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
11339OIP55730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18betaOpa interacting protein 515q15.1CV:PGCnp
DNM:Fromer_2014
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
10845CLPX-caseinolytic mitochondrial matrix peptidase chaperone subunit15q22.31DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
2108ETFAEMA | GA2 | MADDelectron transfer flavoprotein alpha subunit15q23-q25CV:PGCnp
1138CHRNA5LNCR2cholinergic receptor nicotinic alpha 5 subunit15q24CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
5428POLGMDP1 | MIRAS | MTDPS4A | MTDPS4B | PEO | POLG1 | POLGA | SANDO | SCAEpolymerase (DNA) gamma, catalytic subunit15q25CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
5685PSMA4HC9 | HsT17706 | PSC9proteasome subunit alpha 415q25.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
930CD19B4 | CVID3CD19 molecule16p11.2GSMA_IIE
PMID:cooccur
5930RBBP6MY038 | P2P-R | PACT | RBQ-1 | SNAMAretinoblastoma binding protein 616p12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
608TNFRSF17BCM | BCMA | CD269 | TNFRSF13Atumor necrosis factor receptor superfamily member 1716p13.1CV:PGCnp
7329UBE2IC358B7.1 | P18 | UBC9ubiquitin conjugating enzyme E2 I16p13.3CV:PGCnp
DMG:Jaffe_2016
Network
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
23019CNOT1AD-005 | CDC39 | NOT1 | NOT1HCCR4-NOT transcription complex subunit 116q21CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
8883NAE1A-116A10.1 | APPBP1 | HPP1 | ula-1NEDD8 activating enzyme E1 subunit 116q22CV:PGCnp
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
10204NUTF2NTF2 | PP15nuclear transport factor 216q22.1CV:PGCnp
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
9057SLC7A6LAT-2 | LAT3 | y+LAT-2solute carrier family 7 member 616q22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
CompositeSet
3735KARSCMTRIB | DFNB89 | KARS1 | KARS2 | KRSlysyl-tRNA synthetase16q23.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
5336PLCG2APLAID | FCAS3 | PLC-IV | PLC-gamma-2phospholipase C gamma 216q24.1CV:GWASdb
CV:PGCnp
PMID:cooccur
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
60528ELAC2COXPD17 | ELC2 | HPC2elaC ribonuclease Z 217p11.2CV:PGCnp
DMG:Jaffe_2016
5636PRPSAP2PAP41phosphoribosyl pyrophosphate synthetase-associated protein 217p11.2-p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
4927NUP88-nucleoporin 88kDa17p13.2CV:PGCnp
27043PELP1MNAR | P160proline, glutamate and leucine rich protein 117p13.2CV:PGCnp
DMG:Wockner_2014
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
708C1QBPGC1QBP | HABP1 | SF2p32 | gC1Q-R | gC1qR | p32complement component 1, q subcomponent binding protein17p13.3CV:PGCnp
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
55720TSR1-TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)17p13.3CV:PGCnp
DMG:Jaffe_2016
7531YWHAE14-3-3E | HEL2 | KCIP-1 | MDCR | MDStyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon17p13.3Association
CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
9349RPL23L23 | rpL17ribosomal protein L2317qCV:PGCnp
Network
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
6776STAT5AMGF | STAT5signal transducer and activator of transcription 5A17q11.2CV:PGCnp
DMG:Wockner_2014
Network
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
4763NF1NFNS | VRNF | WSSneurofibromin 117q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
26574AATFBFR2 | CHE-1 | CHE1 | DEDapoptosis antagonizing transcription factor17q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
9326ZNHIT3TRIP3zinc finger HIT-type containing 317q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
6155RPL27L27ribosomal protein L2717q21CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
10230NBR2NCRNA00192neighbor of BRCA1 gene 2 (non-protein coding)17q21CV:PGCnp
DMG:Wockner_2014
11056DDX52HUSSY19 | ROK1DEAD-box helicase 5217q21.1CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
9862MED24ARC100 | CRSP100 | CRSP4 | DRIP100 | MED5 | THRAP4 | TRAP100mediator complex subunit 2417q21.1CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
5709PSMD3P58 | RPN3 | S3 | TSTA2proteasome 26S subunit, non-ATPase 317q21.1CV:PGCnp
54474KRT20CD20 | CK-20 | CK20 | K20 | KRT21keratin 2017q21.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
2695GIP-gastric inhibitory polypeptide17q21.3-q22CV:PGCnp
PMID:cooccur
4836NMT1NMTN-myristoyltransferase 117q21.31CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
51096UTP18CGI-48 | WDR50UTP18, small subunit processome component17q21.33CV:PGCnp
DMG:Wockner_2014
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1353COX11COX11PCOX11 cytochrome c oxidase copper chaperone17q22CV:PGCnp
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
10238DCAF7AN11 | HAN11 | SWAN-1 | WDR68DDB1 and CUL4 associated factor 717q23.3CV:PGCnp
DMG:Wockner_2014
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
10672GNA13G13G protein subunit alpha 1317q24.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
94015TTYH2C17orf29tweety family member 217q25.1CV:PGCnp
DEG:Zhao_2015
3396ICT1DS-1 | DS1 | MRP-L58immature colon carcinoma transcript 117q25.1CV:PGCnp
9775EIF4A3DDX48 | MUK34 | NMP265 | NUK34 | RCPS | eIF4AIIIeukaryotic translation initiation factor 4A317q25.3CV:PGCnp
PMID:cooccur
4729NDUFV2CI-24kNADH:ubiquinone oxidoreductase core subunit V218p11.22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
22850ADNP2ZNF508ADNP homeobox 218q23CV:PGCnp
PMID:cooccur
10907TXNL4ABMKS | DIB1 | DIM1 | SNRNP15 | TXNL4 | U5-15kDthioredoxin like 4A18q23CV:PGCnp
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
6597SMARCA4BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10036CHAF1ACAF-1 | CAF1 | CAF1B | CAF1P150 | P150chromatin assembly factor 1 subunit A19p13.3CV:PGCnp
DMG:Wockner_2014
Network
51690LSM7YNL147WLSM7 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.3DMG:vanEijk_2014
Network
7064THOP1EP24.15 | MEPD_HUMAN | MP78 | TOPthimet oligopeptidase 119p13.3CV:PGCnp
DMG:Wockner_2014
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
10775POP4RPP29POP4 homolog, ribonuclease P/MRP subunit19q12CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
10452TOMM40C19orf1 | D19S1177E | PER-EC1 | PEREC1 | TOM40translocase of outer mitochondrial membrane 4019q13PMID:cooccur
5050PAFAH1B3PAFAHGplatelet activating factor acetylhydrolase 1b catalytic subunit 319q13.1GO_Annotation
PMID:cooccur
6626SNRPAMud1 | U1-A | U1Asmall nuclear ribonucleoprotein polypeptide A19q13.1CV:PGCnp
DMG:Jaffe_2016
1054CEBPGGPE1BP | IG/EBP-1CCAAT/enhancer binding protein gamma19q13.11CV:PGCnp
6633SNRPD2SMD2 | SNRPD1 | Sm-D2small nuclear ribonucleoprotein D2 polypeptide19q13.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
3276PRMT1ANM1 | HCP1 | HRMT1L2 | IR1B4protein arginine methyltransferase 119q13.3CV:PGCnpChromatin Remodeling Genes
4849CNOT3LENG2 | NOT3 | NOT3HCCR4-NOT transcription complex subunit 319q13.4CV:PGCnp
6566SLC16A1HHF7 | MCT | MCT1 | MCT1Dsolute carrier family 16 member 11p12CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
79084WDR77HKMT1069 | MEP-50 | MEP50 | Nbla10071 | p44 | p44/Mep50WD repeat domain 771p13.2CV:PGCnp
Expression
GSMA_I
829CAPZA1CAPPA1 | CAPZ | CAZ1capping actin protein of muscle Z-line alpha subunit 11p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
80143SIKE1SIKEsuppressor of IKBKE 11p13.2CV:PGCnp
6272SORT1Gp95 | LDLCQ6 | NT3 | NTR3sortilin 11p13.3|1p21.3-p13.1DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
178AGLGDEamylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase1p21CV:PGCnp
DMG:Jaffe_2016
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
11146GLMNFAP | FAP48 | FAP68 | FKBPAP | GLML | GVM | VMGLOMglomulin, FKBP associated protein1p22.1CV:PGCnp
26135SERBP1CGI-55 | CHD3IP | HABP4L | PAI-RBP1 | PAIRBP1SERPINE1 mRNA binding protein 11p31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
9403SEP15-15 kDa selenoprotein1p31CV:PGCnp
DMG:Wockner_2014
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
4116MAGOHMAGOH1 | MAGOHAmago homolog, exon junction complex core component1p32.3CV:GWASdb
CV:PGCnp
PMID:cooccur
22996TTC39AC1orf34 | DEME-6tetratricopeptide repeat domain 39A1p32.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2035EPB414.1R | EL1 | HEerythrocyte membrane protein band 4.11p33-p32CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
1802DPH2DPH2L2DPH2 homolog1p34CV:PGCnp
DMG:Jaffe_2016
3065HDAC1GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 11p34CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9682KDM4AJHDM3A | JMJD2 | JMJD2A | TDRD14Alysine demethylase 4A1p34.1CV:GWAScat
CV:PGC128
CV:PGCnp
Ascano FMRP targets
Chromatin Remodeling Genes
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
3932LCKIMD22 | LSK | YT16 | p56lck | pp58lckLCK proto-oncogene, Src family tyrosine kinase1p34.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
9410SNRNP4040K | HPRP8BP | PRP8BP | PRPF8BP | SPF38 | WDR57small nuclear ribonucleoprotein U5 subunit 401p35.2CV:PGCnp
DMG:Wockner_2014
5511PPP1R8ARD-1 | ARD1 | NIPP-1 | NIPP1 | PRO2047protein phosphatase 1 regulatory subunit 81p35.3CV:PGCnp
DMG:Wockner_2014
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
1104RCC1CHC1 | RCC1-I | SNHG3-RCC1regulator of chromosome condensation 11p36.1CV:PGCnp
DMG:Jaffe_2016
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
5692PSMB4HN3 | HsN3 | PROS-26 | PROS26proteasome subunit beta 41q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
10899JTBHJTB | HSPC222 | PAR | hJTjumping translocation breakpoint1q21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
10623POLR3CRPC3 | RPC62polymerase (RNA) III subunit C1q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
1163CKS1BCKS1 | PNAS-16 | PNAS-18 | ckshs1CDC28 protein kinase regulatory subunit 1B1q21.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
2224FDPSFPPS | FPS | POROK9farnesyl diphosphate synthase1q22CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
3068HDGFHMG1L2hepatoma-derived growth factor1q23.1CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
910CD1BCD1 | CD1A | R1CD1b molecule1q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
23215PRRC2CBAT2-iso | BAT2D1 | BAT2L2 | XTP2proline rich coiled-coil 2C1q23.3CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
9887SMG7C1orf16 | EST1C | SGA56MSMG7 nonsense mediated mRNA decay factor1q25CV:PGCnp
DMG:Jaffe_2016
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
142PARP1ADPRT | ADPRT 1 | ADPRT1 | ARTD1 | PARP | PARP-1 | PPOL | pADPRT-1poly(ADP-ribose) polymerase 11q41-q42CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
8443GNPATDAP-AT | DAPAT | DHAPAT | RCDP2glyceronephosphate O-acyltransferase1q42Association
CV:PGCnp
PMID:cooccur
CompositeSet
6726SRP9ALURBPsignal recognition particle 9kDa1q42.12CV:PGCnp
DMG:Nishioka_2013
9816URB2KIAA0133 | NET10 | NPA2URB2 ribosome biogenesis 2 homolog (S. cerevisiae)1q42.13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Ascano FMRP targets
23029RBM34-RNA binding motif protein 341q42.3DMG:Jaffe_2016
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3420IDH3BH-IDHB | RP46isocitrate dehydrogenase 3 (NAD+) beta20p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
9777TM9SF4dJ836N17.2transmembrane 9 superfamily protein member 420q11.21CV:PGCnp
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
1434CSE1LCAS | CSE1 | XPO2CSE1 chromosome segregation 1-like (yeast)20q13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
7529YWHABGW128 | HEL-S-1 | HS1 | KCIP-1 | YWHAAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta20q13.1CV:PGCnp
DMG:Wockner_2014
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
23394ADNPADNP1 | HVDAS | MRD28activity-dependent neuroprotector homeobox20q13.13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
8813DPM1CDGIE | MPDSdolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit20q13.13DMG:Wockner_2014
DNM:Fromer_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6227RPS21HLDF | S21ribosomal protein S2120q13.3CV:PGCnp
DMG:Nishioka_2013
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
10694CCT8C21orf112 | Cctq | D21S246 | PRED71chaperonin containing TCP1 subunit 821q22.11CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
539ATP5OATPO | HMC08D05 | OSCPATP synthase, H+ transporting, mitochondrial F1 complex, O subunit21q22.11CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
7290HIRADGCR1 | TUP1 | TUPLE1histone cell cycle regulator22q11.21CNV:YES
CV:PGCnp
GSMA_I
Network
PMID:cooccur
Ascano FMRP targets
5902RANBP1HTF9ARAN binding protein 122q11.21Association
CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GR_WM
GSMA_I
Network
PMID:cooccur
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6634SNRPD3SMD3 | Sm-D3small nuclear ribonucleoprotein D3 polypeptide22q11.23CV:PGCnp
DMG:Nishioka_2013
GSMA_I
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
2130EWSR1EWS | EWS-FLI1 | bK984G1.4EWS RNA binding protein 122q12.2CV:PGCnp
GSMA_I
Network
5816PVALBD22S749parvalbumin22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
158ADSLAMPS | ASASE | ASLadenylosuccinate lyase22q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
638BIKBIP1 | BP4 | NBKBCL2-interacting killer22q13.31CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
6942TCF20AR1 | SPBP | TCF-20transcription factor 20 (AR1)22q13.3|22q13.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
64795RMND5ACTLH | GID2 | GID2A | RMD5 | p44CTLHrequired for meiotic nuclear division 5 homolog A2p11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
8446DUSP11PIR1dual specificity phosphatase 112p13.1CV:PGCnp
10797MTHFD2NMDMCmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase2p13.1CV:PGCnp
84759PCGF12010002K04Rik | NSPC1 | RNF3A-2 | RNF68polycomb group ring finger 12p13.1DMG:Jaffe_2016
10199MPHOSPH10CT90 | MPP10 | MPP10P | PPP1R106M-phase phosphoprotein 102p13.3CV:PGCnp
DMG:Jaffe_2016
6509SLC1A4ASCT1 | SATT | SPATCCMsolute carrier family 1 member 42p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
56902PNO1KHRBP1 | RRP20partner of NOB1 homolog2p14CV:PGCnp
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
2956MSH6GTBP | GTMBP | HNPCC5 | HSAP | p160mutS homolog 62p16CV:PGCnp
DMG:Nishioka_2013
Network
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
10153CEBPZCBF | CBF2 | HSP-CBF | NOC1CCAAT/enhancer binding protein zeta2p22.2CV:PGCnp
DMG:Nishioka_2013
LK:YES
Ascano FMRP targets
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
246243RNASEH1H1RNA | PEOB2 | RNH1ribonuclease H12p25CV:PGCnp
56910STARD7GTT1StAR related lipid transfer domain containing 72q11.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
23020SNRNP200ASCC3L1 | BRR2 | HELIC2 | RP33 | U5-200KDsmall nuclear ribonucleoprotein U5 subunit 2002q11.2CV:PGCnp
Network
Ascano FMRP targets
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
8886DDX18MrDbDEAD-box helicase 182q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
Ascano FMRP targets
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
3938LCTLAC | LPH | LPH1lactase2q21DNM:Xu_2012
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
10651MTX2-metaxin 22q31.1CV:PGCnp
GO_Annotation
G2Cdb.human_mitochondria
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
8520HAT1KAT1histone acetyltransferase 12q31.2-q33.1CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
7341SUMO1DAP1 | GMP1 | OFC10 | PIC1 | SENP2 | SMT3 | SMT3C | SMT3H3 | UBL1small ubiquitin-like modifier 12q33CV:PGCnp
DMG:Jaffe_2016
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1933EEF1B2EEF1B | EEF1B1 | EF1Beukaryotic translation elongation factor 1 beta 22q33.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
Network
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
5757PTMATMSAprothymosin, alpha2q37.1CV:PGCnp
DMG:Jaffe_2016
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
1849DUSP7MKPX | PYST2dual specificity phosphatase 73p21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9941EXOGENDOGL1 | ENDOGL2 | ENGL | ENGL-a | ENGL-b | ENGLA | ENGLBendo/exonuclease (5'-3'), endonuclease G-like3p21.3CV:PGCnp
GSMA_I
7584ZNF35HF.10 | HF10 | Zfp105zinc finger protein 353p21.32CV:PGCnp
9943OXSR1OSR1oxidative stress responsive 13p22.2CV:PGCnp
GSMA_I
PMID:cooccur
27258LSM3SMX4 | USS2 | YLR438CLSM3 homolog, U6 small nuclear RNA and mRNA degradation associated3p25.1CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
CompositeSet
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
9797TATDN2-TatD DNase domain containing 23p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
29114TAGLN3NP22 | NP24 | NP25transgelin 33q13.2CV:PGCnp
DEG:Zhao_2015
GO_Annotation
GSMA_IIA
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
7555CNBPCNBP1 | DM2 | PROMM | RNF163 | ZCCHC22 | ZNF9CCHC-type zinc finger, nucleic acid binding protein3q21CV:PGCnp
Network
8607RUVBL1ECP-54 | ECP54 | INO80H | NMP 238 | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49ARuvB like AAA ATPase 13q21CV:PGCnp
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
11222MRPL3COXPD9 | MRL3 | RPML3mitochondrial ribosomal protein L33q21-q23CV:PGCnp
2960GTF2E1FE | TF2E1 | TFIIE-Ageneral transcription factor IIE subunit 13q21-q24CV:PGCnp
DEG:Zhao_2015
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
11235PDCD10CCM3 | TFAR15programmed cell death 103q26.1CV:PGCnp
27333GOLIM4GIMPC | GOLPH4 | GPP130 | P138golgi integral membrane protein 43q26.2CV:PGCnp
DMG:Jaffe_2016
6434TRA2BHtra2-beta | PPP1R156 | SFRS10 | SRFS10 | TRA2-BETA | TRAN2Btransformer 2 beta homolog (Drosophila)3q26.2-q27CV:PGCnp
86ACTL6AACTL6 | ARPN-BETA | Arp4 | BAF53A | INO80Kactin like 6A3q26.33CV:PGCnp
DMG:Jaffe_2016
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
7037TFRCCD71 | IMD46 | T9 | TFR | TFR1 | TR | TRFR | p90transferrin receptor3q29CNV:YES
CV:PGCnp
Network
PMID:cooccur
22916NCBP2CBC2 | CBP20 | NIP1 | PIG55nuclear cap binding protein subunit 23q29CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
23244PDS5APIG54 | SCC-112 | SCC112PDS5 cohesin associated factor A4p14CV:PGCnp
1487CTBP1BARSC-terminal binding protein 14p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
PROTEIN CLUSTERING
CompositeSet
Darnell FMRP targets
8602NOP14C4orf9 | NOL14 | RES4-25 | RES425 | UTP2NOP14 nucleolar protein4p16.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
7884SLBPHBPstem-loop binding protein4p16.3CV:PGCnp
DMG:Wockner_2014
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
6731SRP72BMFF | BMFS1 | HEL103signal recognition particle 72kDa4q11CV:PGCnp
DMG:Jaffe_2016
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1633DCK-deoxycytidine kinase4q13.3-q21.1CV:PGCnp
DMG:Jaffe_2016
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
6870TACR3HH11 | NK-3R | NK3R | NKR | TAC3RLtachykinin receptor 34q25CV:PGCnp
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
8467SMARCA5ISWI | SNF2H | WCRF135 | hISWI | hSNF2HSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 54q31.1-q31.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
Chromatin Remodeling Genes
5481PPIDCYP-40 | CYPDpeptidylprolyl isomerase D4q31.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
27292DIMT1DIM1 | DIMT1L | HSA9761 | HUSSY5DIM1 dimethyladenosine transferase 1 homolog5q12.1CV:PGCnp
DMG:Jaffe_2016
25859PART1NCRNA00206prostate androgen-regulated transcript 1 (non-protein coding)5q12.1CV:PGCnp
6880TAF9MGC:5067 | STAF31/32 | TAF2G | TAFII-31 | TAFII-32 | TAFII31 | TAFII32 | TAFIID32TATA-box binding protein associated factor 95q13.2DNM:Fromer_2014CompositeSet
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
10622POLR3GRPC32 | RPC7polymerase (RNA) III subunit G5q14.3CV:PGCnp
9140ATG12APG12 | APG12L | FBR93 | HAPG12autophagy related 125q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
3565IL4BCGF-1 | BCGF1 | BSF-1 | BSF1 | IL-4interleukin 45q31.1Association
CV:PGCnp
GR_COR
GR_WM
GSMA_I
PMID:cooccur
3313HSPA9CRP40 | CSA | EVPLS | GRP-75 | GRP75 | HEL-S-124m | HSPA9B | MOT | MOT2 | MTHSP75 | PBP74 | SAANheat shock protein family A (Hsp70) member 95q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
4869NPM1B23 | NPMnucleophosmin (nucleolar phosphoprotein B23, numatrin)5q35.1CV:PGCnp
GSMA_IIA
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
51491NOP16HSPC111 | HSPC185NOP16 nucleolar protein5q35.2CV:PGCnp
55651NHP2DKCB2 | NHP2P | NOLA2NHP2 ribonucleoprotein5q35.3CV:PGCnp
DMG:Wockner_2014
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
3187HNRNPH1HNRPH | HNRPH1 | hnRNPHheterogeneous nuclear ribonucleoprotein H1 (H)5q35.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
89845ABCC10EST182763 | MRP7 | SIMRP7ATP binding cassette subfamily C member 106p21.1CV:PGCnp
GSMA_IIE
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
11074TRIM31C6orf13 | HCG1 | HCGI | RNFtripartite motif containing 316p21.3CV:GWASdb
CV:PGCnp
GSMA_I
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10471PFDN6H2-KE2 | HKE2 | KE-2 | PFD6prefoldin subunit 66p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
6882TAF11MGC:15243 | PRO2134 | TAF2I | TAFII28TATA-box binding protein associated factor 116p21.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
6631SNRPCU1C | Yhc1small nuclear ribonucleoprotein polypeptide C6p21.31CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
80742PRR3CAT56proline rich 36p21.33CV:PGCnp
DMG:Wockner_2014
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9972NUP153HNUP153 | N153nucleoporin 153kDa6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
10048RANBP9BPM-L | BPM90 | RANBPM | RanBP7RAN binding protein 96p23CV:PGCnp
GSMA_I
Network
PMID:cooccur
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
4199ME1HUMNDME | MESmalic enzyme 1, NADP(+)-dependent, cytosolic6q12CV:PGCnp
22999RIMS1CORD7 | RAB3IP2 | RIM | RIM1regulating synaptic membrane exocytosis 16q12-q13CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10492SYNCRIPGRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Qsynaptotagmin binding, cytoplasmic RNA interacting protein6q14-q15CV:PGCnp
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
3066HDAC2HD2 | RPD3 | YAF1histone deacetylase 26q21DMG:Wockner_2014
Network
PMID:cooccur
Chromatin Remodeling Genes
25842ASF1ACGI-98 | CIA | HSPC146anti-silencing function 1A histone chaperone6q22.31CV:PGCnpChromatin Remodeling Genes
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
5110PCMT1PIMTprotein-L-isoaspartate (D-aspartate) O-methyltransferase6q25.1CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
39ACAT2-acetyl-CoA acetyltransferase 26q25.3CV:PGCnp
PMID:cooccur
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6908TBPGTF2D | GTF2D1 | HDL4 | SCA17 | TFIIDTATA-box binding protein6q27Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
23480SEC61GSSS1Sec61 translocon gamma subunit7p11.2CV:PGCnp
DMG:Jaffe_2016
5478PPIACYPA | CYPH | HEL-S-69ppeptidylprolyl isomerase A7p13CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5683PSMA2HC3 | MU | PMSA2 | PSC2proteasome subunit alpha 27p13CV:PGCnp
Expression
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
9883POM121P145 | POM121APOM121 transmembrane nucleoporin7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
7458EIF4HWBSCR1 | WSCR1 | eIF-4Heukaryotic translation initiation factor 4H7q11.23CNV:YES
CV:PGCnp
9031BAZ1BWBSCR10 | WBSCR9 | WSTFbromodomain adjacent to zinc finger domain 1B7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
11257TP53TG1LINC00096 | NCRNA00096 | P53TG1 | P53TG1-D | TP53AP1TP53 target 1 (non-protein coding)7q21.1CV:PGCnp
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
7979SHFM1DSS1 | ECD | SEM1 | SHFD1 | SHSF1 | Shfdg1split hand/foot malformation (ectrodactyly) type 17q21.3CV:PGCnp
PMID:cooccur
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
5701PSMC2MSS1 | Nbla10058 | S7proteasome 26S subunit, ATPase 27q22.1-q22.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Guipponi_2014
1738DLDDLDD | DLDH | E3 | GCSL | LAD | PHE3dihydrolipoamide dehydrogenase7q31-q32CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
6742SSBP1Mt-SSB | SOSS-B1 | SSBP | mtSSBsingle-stranded DNA binding protein 1, mitochondrial7q34DMG:Nishioka_2013
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
22976PAXIP1CAGF28 | CAGF29 | PACIP1 | PAXIP1L | PTIP | TNRC2PAX interacting protein 17q36CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
27257LSM1CASM | YJL124CLSM1 homolog, mRNA degradation associated8p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3620IDO1IDO | IDO-1 | INDOindoleamine 2,3-dioxygenase 18p11.21PMID:cooccur
2961GTF2E2FE | TF2E2 | TFIIE-Bgeneral transcription factor IIE subunit 28p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
2936GSRHEL-75 | HEL-S-122mglutathione reductase8p21.1CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
9NAT1AAC1 | MNAT | NAT-1 | NATIN-acetyltransferase 1 (arylamine N-acetyltransferase)8p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2222FDFT1DGPT | ERG9 | SQS | SSfarnesyl-diphosphate farnesyltransferase 18p23.1-p22CV:PGCnp
DMG:Jaffe_2016
9821RB1CC1ATG17 | CC1 | FIP200 | PPP1R131RB1 inducible coiled-coil 18q11CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
5591PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptide8q11CV:PGCnp
DMG:vanEijk_2014
DNM:McCarthy_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
6917TCEA1GTF2S | SII | TCEA | TF2S | TFIIStranscription elongation factor A18q11.2CV:PGCnp
DMG:Jaffe_2016
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
6921TCEB1SIII | eloCtranscription elongation factor B subunit 18q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2171FABP5E-FABP | EFABP | KFABP | PA-FABP | PAFABPfatty acid binding protein 58q21.13CV:GWASdb
CV:PGCnp
Expression
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
1875E2F5E2F-5E2F transcription factor 58q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
92140MTDH3D3 | AEG-1 | AEG1 | LYRIC | LYRIC/3D3metadherin8q22.1CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
26986PABPC1PAB1 | PABP | PABP1 | PABPC2 | PABPL1poly(A) binding protein, cytoplasmic 18q22.2-q23CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8667EIF3HEIF3S3 | eIF3-gamma | eIF3-p40eukaryotic translation initiation factor 3 subunit H8q24.11CV:PGCnp
Network
9897KIAA0196RTSC | RTSC1 | SPG8KIAA01968q24.13CV:PGCnp
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
58500ZNF250ZFP647 | ZNF647zinc finger protein 2508q24.3CV:PGCnp
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
8434RECKST15reversion inducing cysteine rich protein with kazal motifs9p13.3CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
3376IARSIARS1 | ILERS | ILRS | IRS | PRO0785isoleucyl-tRNA synthetase9q21CV:PGCnp
2395FXNCyaY | FA | FARR | FRDA | X25frataxin9q21.11CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
6850SYKp72-Sykspleen tyrosine kinase9q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
9128PRPF4HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60pre-mRNA processing factor 49q31-q33CV:PGCnp
Network
Ascano FMRP targets
11064CNTRLCEP1 | CEP110 | FAN | bA165P4.1centriolin9q33.2CV:PGCnp
23203PMPCAAlpha-MPP | INPP5E | P-55 | SCAR2peptidase (mitochondrial processing) alpha9q34.3CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
2334AFF2FMR2 | FMR2P | FRAXE | MRX2 | OX19AF4/FMR2 family member 2Xq28CV:GWASdb
CV:PGCnp
GO_Annotation
Potential synaptic genes
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes
3423IDSMPS2 | SIDSiduronate 2-sulfataseXq28CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets