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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

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TissGeneSummary

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TissGeneExp

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TissGene-miRNA

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TissGeneMut: TissGeneSNV, TissGeneCNV, and TissGeneFusions

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TissGeneNet

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TissGeneProg

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TissGeneClin: TissGeneDrug and TissGeneDisease

TissGeneSummary for TEX14
check button Gene summary
Basic gene informationGene symbolTEX14
Gene nametestis expressed 14
SynonymsCT113
CytomapUCSC genome browser: 17q22
Type of geneprotein-coding
RefGenesNM_001201457.1,
NM_031272.4,NM_198393.3,
Descriptioncancer/testis antigen 113inactive serine/threonine-protein kinase TEX14protein kinase-like protein SgK307sugen kinase 307testis expressed sequence 14testis-expressed protein 14testis-expressed sequence 14 protein
Modification date20141207
dbXrefs MIM : 605792
HGNC : HGNC
Ensembl : ENSG00000121101
Vega : OTTHUMG00000179245
ProteinUniProt:
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_TEX14
BioGPS: 56155
PathwayNCI Pathway Interaction Database: TEX14
KEGG: TEX14
REACTOME: TEX14
Pathway Commons: TEX14
ContextiHOP: TEX14
ligand binding site mutation search in PubMed: TEX14
UCL Cancer Institute: TEX14
Assigned class in TissGDB*A
Included tissue-specific gene expression resourcesHPA,TiGER,GTEx
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx)Testis
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA)TGCT
Reference showing the relevant tissue of TEX14Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells. Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):12372-7. doi: (pmid:26392564 )
go to article
Description by TissGene annotationsCancer gene
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C.

check button Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO termPubMed ID


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TissGeneExp for TEX14

check button Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
gene exp


check button Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01)
gene isoform exp


check button Gene expressions across normal tissues of GTEx data
(GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct)
- Here, we shows the matched tissue types only among our 28 cancer types.
normal gene exp


check button Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
DEG exp

- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05)
Cancer typeMean(exp) in tumorMean(exp) in matched normalLog2FCP-val.FDR
LUSC-0.628768551.236311842-1.8650803921.73E-127.76E-12
LUAD-0.6244799771.30705623-1.9315362073.33E-195.88E-18
KICH-1.370256943-0.350796943-1.019464.28E-050.000120448


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TissGene-miRNA for TEX14

check button Significantly anti-correlated miRNAs of TissGene across 28 cancer types
(Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016)
(TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21)
(TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16)
(Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25))
Cancer typemiRNA idmiRNA accessionP-val.Coeff.# samples


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TissGeneMut for TEX14
TissGeneSNV for TEX14

check button nsSNV counts per each loci.
Different colors of circles represent different cancer types. Circle size denotes number of samples.
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)

* Click on the image to enlarge it in a new window.
SNV lollipop
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check button Somatic nucleotide variants of TissGene across 28 cancer types
(X-axis: cancer type and Y-axis: % of mutated samples)
The numbers in parentheses are numbers of samples with mutation (nsSNVs).
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)
SNV distribution

- nsSNVs sorted by frequency.
AAchangeCancer type# samples
p.R6CCOAD2
p.E905KSKCM2
p.W928*HNSC1
p.S1060YUCEC1
p.P532TREAD1
p.L227FSKCM1
p.C1244YSTAD1
p.E1376AREAD1
p.E743KHNSC1
p.W1476XCOAD1
p.Q226HBLCA1
p.S1088LUCEC1
p.E1270QBLCA1
p.M908IBLCA1
p.A238SLUAD1
p.S1183CCESC1
p.S1264YREAD1
p.A613VSTAD1
p.E983QSTAD1
p.T906ALIHC1
p.I554TSARC1
p.K126*HNSC1
p.R406*UCS1
p.P569HESCA1
p.Q970*THCA1
p.E1477KLUAD1
p.E394KSKCM1
p.E606VACC1
p.S1186FSKCM1
p.D499HBLCA1
p.D1167YPAAD1
p.D477NCESC1
p.R501QLUAD1
p.S1383PUCEC1
p.L726HREAD1
p.T941ACOAD1
p.E396KCOAD1
p.E1089QPAAD1
p.R171QPCPG1
p.C308RBLCA1
p.G267ELIHC1
p.E321KLGG1
p.F1322LBLCA1
p.S245YREAD1
p.F880LREAD1
p.S379YTHYM1
p.S1345FESCA1
p.Q220HBLCA1
p.S883RLUAD1
p.E320QBLCA1
p.R412XUCS1
p.W955CESCA1
p.I642VHNSC1
p.D284NSKCM1
p.L275MSTAD1
p.S1274FLUSC1
p.W934*HNSC1
p.E730XKIRC1
p.P10LHNSC1
p.R1018MUCEC1
p.E1034AESCA1
p.P8SSKCM1
p.A390VPRAD1
p.A461VUCEC1
p.E1376*UCEC1
p.S659FSKCM1
p.S708*ESCA1
p.E749KHNSC1
p.E996KLUSC1
p.P228LLUAD1
p.A872DSARC1
p.S714XESCA1
p.R369CCOAD1
p.Y478*LUAD1
p.E552KSKCM1
p.S1070TLUAD1
p.R136HLGG1
p.S443YESCA1
p.P808TSARC1
p.A884TTHYM1
p.A213VSTAD1
p.I500VCOAD1
p.E1083QPAAD1
p.R864TBLCA1
p.G641RSKCM1
p.S278NREAD1
p.E1164*BLCA1
p.R755MSTAD1
p.V472FSKCM1
p.T411MUCEC1
p.P584SSKCM1
p.E1040KLUSC1
p.E1330DUCEC1
p.Q594EBLCA1
p.D73VLIHC1
p.E1046*CESC1
p.N466IBRCA1
p.E621KUCEC1
p.S1197ABLCA1
p.A787VSKCM1
p.A51VTHYM1
p.R1442KSKCM1
p.A244SLUAD1
p.A1296TSKCM1
p.E1158*BLCA1
p.P1272SSKCM1
p.R116QPRAD1
p.E596DUCEC1
p.P234LESCA1
p.Q1492HLUSC1
p.D1419YREAD1
p.M344IPRAD1
p.E1394DLUAD1
p.R1281ILGG1
p.Q418HLUSC1
p.P272LSKCM1
p.P1448QLUAD1
p.A936TCOAD1
p.S877RLUAD1
p.R406GBLCA1
p.R1395IOV1
p.S1269CBLCA1
p.P640ABLCA1
p.P228LESCA1
p.G332SSTAD1
p.T1048KSARC1
p.W259*LUAD1
p.E590DUCEC1
p.S1191ABLCA1
p.R171WSTAD1
p.A1296TUCEC1
p.N276DUCEC1
p.A1196DSTAD1
p.V31FBRCA1
p.A973TPAAD1
p.L1324PBLCA1
p.C147RSTAD1
p.W216*KICH1
p.A1288SSKCM1
p.E1243*UCEC1
p.P1410LSKCM1
p.A967TTHYM1
p.E1314KSKCM1
p.Q498ELUAD1
p.E612VACC1
p.V264AUCEC1
p.R493XCOAD1
p.P965AKIRP1
p.E757KSKCM1
p.E1076KLUAD1
p.K852NKIRP1
p.L413IUCEC1
p.A218VREAD1
p.F1316LBLCA1
p.S1099LUCEC1
p.W949CESCA1
p.M902IBLCA1
p.Q515HBLCA1
p.R193*LUAD1
p.A588DSARC1
p.E611QCESC1
p.Q145HSKCM1
p.L43FSKCM1
p.D1419YBLCA1
p.D756HLUAD1
p.G996ESKCM1
p.A1353ESARC1
p.P825SBLCA1
p.G185_spliceGBM1
p.R507QLUAD1
p.D762HLUAD1
p.R171WPRAD1
p.S372NLGG1
p.A218VCOAD1
p.D1072NLUAD1
p.A384VPRAD1
p.I636VHNSC1
p.P831SBLCA1
p.G100DSTAD1
p.S1087FLUAD1
p.N124KLIHC1
p.A218GSKCM1
p.P10HLUAD1
p.E992QLUAD1
p.A1112VLUAD1
p.G181DCHOL1
p.R85PBRCA1
p.G1474CLGG1
p.D1401EKIRC1
p.C1238YSTAD1
p.T1009MSTAD1
p.D1173YPAAD1
p.H1403RLIHC1
p.E1092KSKCM1
p.R297QBRCA1
p.A961TTHYM1
p.D1407EKIRC1
p.R323SLIHC1
p.P971AKIRP1
p.H94RSTAD1
p.V235ELUAD1
p.Q145LLUAD1
p.R335*THCA1
p.E314QBLCA1
p.R85HESCA1
p.L43IREAD1


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TissGeneCNV for TEX14

check button Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples)
(TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16)
CNV


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TissGeneFusions for TEX14

check button Fusion genes including TissGene
(ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01)
DatabaseSrcCancer typeSampleFusion geneORF5'-gene BP3'-gene BP
Chimerdb3.0FusionScanBRCATCGA-C8-A1HO-01AGRB2-TEX145'UTR-CDSchr17:73401569chr17:56707915
Chimerdb3.0FusionScanBRCATCGA-A7-A2KD-01AKIAA0100-TEX14Out-of-Framechr17:26965269chr17:56692706
Chimerdb3.0FusionScanESCATCGA-L5-A8NJ-01APITPNC1-TEX14CDS-5'UTRchr17:65529066chr17:56729363
TCGAfusionPortalPRADABRCATCGA-A7-A2KD-01AKIAA0100-TEX14Out-of-frameChr17:26965270Chr17:56692706
TCGAfusionPortalPRADABRCATCGA-A8-A07I-01ATEX14-SDK2Out-of-frameChr17:56661861Chr17:71387677
TCGAfusionPortalPRADABRCATCGA-EW-A1J1-01AARHGAP23-TEX14In-frameChr17:36642381Chr17:56707915


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TissGeneNet for TEX14

check button Co-expressed gene networks based on protein-protein interaction data (CePIN)
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(PINA2 ppi data)
BRCA (tumor)BRCA (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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COAD (tumor)COAD (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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HNSC (tumor)HNSC (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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KICH (tumor)KICH (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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KIRC (tumor)KIRC (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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KIRP (tumor)KIRP (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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LIHC (tumor)LIHC (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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LUAD (tumor)LUAD (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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LUSC (tumor)LUSC (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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PRAD (tumor)PRAD (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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STAD (tumor)STAD (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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THCA (tumor)THCA (normal)
TEX14, CEP55 (tumor)TEX14, CEP55 (normal)
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TissGeneProg for TEX14

check button Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image to enlarge it in a new window.
survival 1

check button Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 2

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 3

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 4

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TissGeneClin for TEX14
TissGeneDrug for TEX14

check button Drug information targeting TissGene
(DrugBank Version 5.0.6, 2017-04-01)
DrugBank IDDrug nameDrug activityDrug typeDrug status


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TissGeneDisease for TEX14

check button Disease information associated with TissGene
(DisGeNet, 2016-06-01)
Disease IDDisease name# pubmedsSource
umls:C0004509Azoospermia1GAD
umls:C0006142Malignant neoplasm of breast1BeFree,GAD
umls:C0028960Oligospermia1GAD
umls:C0678222Breast Carcinoma1BeFree
umls:C1336708Testicular Germ Cell Tumor1BeFree