Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10000033

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10000033
Fusion NameHBV-chr18:q22.2 integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR and sequencing
Wet AssayYes
Sample IDKM
Sample NameKM
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID15806150
JournalOncogene
Published Year2005
Human Genome
Human Genome Version DescriptionHg16
Human Genome RefSeq AccessionGCF_000001405.10
Human Chromosomechr18
Cytogenetic Bandq22.2
Human Strand
Human Integration Location Type-
Hg19 Start-
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-