| Basic Information ▶ | |
| VISDB ID | TVIS10000384 |
|---|---|
| Fusion Name | HBV-FAM90A23P integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | invPCR+NAH |
| Wet Assay | Yes |
| Sample ID | NL02.C |
| Sample Name | NL02.C |
| Sample Type | Cell line |
| Age | 35 |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 28414318 |
| Journal | Oncogenesis |
| Published Year | 2017 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr8 |
| Cytogenetic Band | p23.1 |
| Human Strand | |
| Human Integration Location Type | Intronic |
| Hg19 Start | 7441825 |
| Hg19 End | 7442040 |
| Hg38 Start | 7584303 |
| Hg38 End | 7584518 |
| Junction Sequence | TTGGACCGCACTGGGAAACACAGATGAGGAAAGTCAACAACGCTTTGTCCTTCAGTGCCTGGCTCCTTTTTCAGCTCGTCTTGCGACTCCAGGCATTATGCCTGAAAAGTCTCCCGGACGCCTGTGAGGCTCTAATTCCCTGGGTCCCATTGCCATGTCTCTGGATTTGCGAAGATCCACCGCACCCTCTGTGGAACTCCCGTGTCGGTGAACTT |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | FAM90A23 |
| Distance | 1651 |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | C |
| Virus Genome Accession | AB033556.1 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus DNA, complete genome, isolate:AK66 |
| Virus Genome Length | 3215 |
| Virus Breakpoint1 | 1625 |
| Virus Breakpoint2 | 1606 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | CATGGAAACCACCGTGAACA |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D