| Basic Information ▶ | |
| VISDB ID | TVIS10000445_AAV2 |
|---|---|
| Fusion Name | AAV2-BBS12 integration |
| Validated | Yes |
| Curated Way | ViMIC |
| Method | Viral capture sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | #2848T |
| Sample Type | Liver tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 31375600 |
| Journal | Gut |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr4 |
| Cytogenetic Band | q27 |
| Human Strand | |
| Human Integration Location Type | exonic |
| Hg19 Start | 123664084 |
| Hg19 End | 123664103 |
| Hg38 Start | 122742929 |
| Hg38 End | 122742948 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | BBS12 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Adeno-associated virus type 2 |
| Virus Subtype Name | AAV2/13 |
| Virus Genome Accession | - |
| TaxonomyID | 272636 |
| Virus Abbreviation | AAV2 |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 4630 |
| Virus Breakpoint2 | 3730 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 2100001 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D