| Basic Information ▼ | |
| VISDB ID | TVIS10000448_AAV2 |
|---|---|
| Fusion Name | AAV2-ENSG00000294563 integration |
| Validated | Yes |
| Curated Way | ViMIC |
| Method | Viral capture sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | #1920T |
| Sample Type | Liver tumor |
| Age | - |
| Gender | - |
| Disease Information ▼ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▼ | |
| PubMed ID | 31375600 |
| Journal | Gut |
| Published Year | 2020 |
| Human Genome ▼ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr12 |
| Cytogenetic Band | q14.1 |
| Human Strand | |
| Human Integration Location Type | intronic |
| Hg19 Start | 58249978 |
| Hg19 End | 58249995 |
| Hg38 Start | 57856195 |
| Hg38 End | 57856212 |
| Junction Sequence | - |
| Target Gene ▼ | |
| Target Gene | ENSG00000294563 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▼ | |
| Virus Name | Adeno-associated virus type 2 |
| Virus Subtype Name | AAV2 |
| Virus Genome Accession | - |
| TaxonomyID | 272636 |
| Virus Abbreviation | AAV2 |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 4202 |
| Virus Breakpoint2 | 4042 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 2100004 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D