| Basic Information ▶ | |
| VISDB ID | TVIS10000453_AAV2 |
|---|---|
| Fusion Name | AAV2-ENSG00000303306 integration |
| Validated | Yes |
| Curated Way | ViMIC |
| Method | Viral capture sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | #2141T |
| Sample Type | Liver tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 31375600 |
| Journal | Gut |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr8 |
| Cytogenetic Band | q12.3 |
| Human Strand | |
| Human Integration Location Type | intronic |
| Hg19 Start | 64594019 |
| Hg19 End | 64594036 |
| Hg38 Start | 63681461 |
| Hg38 End | 63681478 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | ENSG00000303306, ENSG00000287844 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Adeno-associated virus type 2 |
| Virus Subtype Name | AAV2 |
| Virus Genome Accession | - |
| TaxonomyID | 272636 |
| Virus Abbreviation | AAV2 |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 4608 |
| Virus Breakpoint2 | 4570 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 2100009 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D