Basic Information ▼ | |
VISDB ID | TVIS10001132 |
---|---|
Fusion Name | HBV-LOC105374103 integration |
Validated | No |
Curated Way | VISDB1.0 |
Method | High-throughput Viral Integration Detection method |
Wet Assay | No |
Sample ID | 75405 |
Sample Name | 075405T |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | Hepatocellular carcinoma |
Disease Abbreviation | HCC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 27703150 |
Journal | NATURE COMMUNICATIONS |
Published Year | 2016 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr3 |
Cytogenetic Band | q22.1 |
Human Strand | |
Human Integration Location Type | Intronic |
Hg19 Start | 129866866 |
Hg19 End | 129866866 |
Hg38 Start | 130148023 |
Hg38 End | 130148023 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | ENSG00000302494, LINC02021 |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Hepatitis B virus |
Virus Subtype Name | - |
Virus Genome Accession | AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1 |
TaxonomyID | 10407 |
Virus Abbreviation | HBV |
Virus Genome | - |
Virus Genome Length | 0 |
Virus Breakpoint1 | - |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |