Basic Information ▼ | |
VISDB ID | TVIS10015672 |
---|---|
Fusion Name | HBV-chr17 integration |
Validated | No |
Curated Way | VISDB1.0 |
Method | Massive anchored parallel sequencing |
Wet Assay | No |
Sample ID | 102 |
Sample Name | C102 |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | Hepatocellular carcinoma |
Disease Abbreviation | HCC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 23236287 |
Journal | PLOS Genetics |
Published Year | 2012 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr17 |
Cytogenetic Band | q21.32 |
Human Strand | + |
Human Integration Location Type | - |
Hg19 Start | 47157562 |
Hg19 End | 47157562 |
Hg38 Start | 49080200 |
Hg38 End | 49080200 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | - |
Nearby Gene | B4GALNT2P1 |
Distance | 5311 |
Virus Information ▼ | |
Virus Name | Hepatitis B virus |
Virus Subtype Name | - |
Virus Genome Accession | AY800389.1 ;AY800390.1;AY800391.1;AY800392.1 |
TaxonomyID | 10407 |
Virus Abbreviation | HBV |
Virus Genome | - |
Virus Genome Length | 0 |
Virus Breakpoint1 | - |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |