Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10015897

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10015897
Fusion NameHBV-KIF24 integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR and sequencing
Wet AssayYes
Sample ID09H-60
Sample Name09H-60
Sample TypeTumor
Age57
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID22962577
JournalPLoS One
Published Year2012
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr9
Cytogenetic Bandp13.3
Human Strand-
Human Integration Location TypeIntron
Hg19 Start34295985
Hg19 End34295985
Hg38 Start34295987
Hg38 End34295987
Junction Sequence-
Target Gene
Target GeneKIF24
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint11561
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-