Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10016609

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10016609
Fusion NameHBV-chr6:p12.1 integration
ValidatedYes
Curated WayVISDB1.0
MethodinvPCR+NAH
Wet AssayYes
Sample ID15
Sample Name15
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID18023912
JournalJournal of Hepatology
Published Year2008
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosomechr6
Cytogenetic Bandp12.1
Human Strand
Human Integration Location Type-
Hg19 Start46424722
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region TypeHBV-X
Integrated Virus Sequence-
ViMIC ID-