Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10016661

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10016661
Fusion NameHBV-chr2 integration
ValidatedYes
Curated WayVISDB1.0
MethodInverse nested PCR (invPCR)
Wet AssayYes
Sample IDP5
Sample NameP5
Sample TypeNontumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID20519397
JournalJOURNAL OF VIROLOGY
Published Year2010
Human Genome
Human Genome Version DescriptionFeb_2009_build
Human Genome RefSeq Accession
Human Chromosomechr2
Cytogenetic Bandq31.1
Human Strand-
Human Integration Location TypeIntergene
Hg19 Start174851224
Hg19 End174851224
Hg38 Start173986496
Hg38 End173986496
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionV01460.1
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus (strain ayw) genome
Virus Genome Length3182
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-