Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10016665

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10016665
Fusion NameHBV-TULP1 integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR and sequencing
Wet AssayYes
Sample IDNT_007592
Sample NameNT_007592
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID23842217
JournalJ Clin Gastroenterol
Published Year2015
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosomechr6
Cytogenetic Bandp21.2
Human Strand
Human Integration Location Typeintron
Hg19 Start35421045
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint11395
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-