Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10016688

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10016688
Fusion NameHBV-chr13:q12 integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR and sequencing
Wet AssayYes
Sample IDNT_024524
Sample NameNT_024524
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID23842217
JournalJ Clin Gastroenterol
Published Year2015
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosomechr13
Cytogenetic Bandq12
Human Strand
Human Integration Location Type-
Hg19 Start1246514
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint11445
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-