Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10016910

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10016910
Fusion NameHBV-chr4: integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR and sequencing
Wet AssayYes
Sample ID327
Sample Name327
Sample TypeNontumor
Age-
Gender-
Disease Information
Disease NameChronic HBV (CHB) infection
Disease AbbreviationCHB
CancerNo
Literature
PubMed ID29797342
JournalJ Med Virol
Published Year2018
Human Genome
Human Genome Version DescriptionGRCh38.p12
Human Genome RefSeq AccessionGCF_000001405.38
Human Chromosomechr4
Cytogenetic Band-
Human Strand
Human Integration Location TypeIntergenic
Hg19 Start-
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint11338
Virus Breakpoint21897
Virus Gene Name-
Virus Region TypeX
Integrated Virus Sequence-
ViMIC ID-