Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10017445

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10017445
Fusion NameHBV-chr16 integration
ValidatedYes
Curated WayVISDB1.0
MethodPCR and Sanger sequencing
Wet AssayYes
Sample IDN/A
Sample NameN/A
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID26397742
JournalMOLECULAR MEDICINE REPORTS
Published Year2015
Human Genome
Human Genome Version Description
Human Genome RefSeq Accession
Human Chromosomechr16
Cytogenetic Band-
Human Strand
Human Integration Location Type-
Hg19 Start51320015
Hg19 End51319900
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint11631
Virus Breakpoint21807
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-