Basic Information ▼ | |
VISDB ID | TVIS10017587 |
---|---|
Fusion Name | HBV-MLLT6 integration |
Validated | No |
Curated Way | VISDB1.0 |
Method | Transcriptome Sequencing |
Wet Assay | No |
Sample ID | 234 |
Sample Name | 234T |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | Hepatocellular carcinoma |
Disease Abbreviation | HCC |
Cancer | Yes |
Literature ▼ | |
PubMed ID | 26867494 |
Journal | Journal of Hepatology |
Published Year | 2016 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr17 |
Cytogenetic Band | q12 |
Human Strand | |
Human Integration Location Type | Exonic |
Hg19 Start | 36872024 |
Hg19 End | 36872024 |
Hg38 Start | 38715771 |
Hg38 End | 38715771 |
Junction Sequence | - |
Target Gene ▼ | |
Target Gene | MLLT6, ENSG00000275665 |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Hepatitis B virus |
Virus Subtype Name | C |
Virus Genome Accession | DQ089769.1 |
TaxonomyID | 10407 |
Virus Abbreviation | HBV |
Virus Genome | Hepatitis B virus isolate HK430, complete genome |
Virus Genome Length | 3215 |
Virus Breakpoint1 | 1516 |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | X protein;Polymerase; |
Integrated Virus Sequence | TCCTTTGTCTACGTCCCGTCGGCGCTGAATCCCGCGGACGACCCGTCTCGGGGCCGTTTGGGACTCTACCGTCCCCTTCTTCGTCTGCCGTTCCGGCCGA| |CCACGGGGCGCACCTCTCTTTACGCGGTCTCCCCGTCTGTGCCTTCTCATCTGCCGGACCGTGTGCACTTCGCTTCACCTCTGCACGTCGCATGGAGACC |
ViMIC ID | - |