| Basic Information ▶ | |
| VISDB ID | TVIS10019080 |
|---|---|
| Fusion Name | HBV-THUMPD3-AS1 integration |
| Validated | No |
| Curated Way | VISDB1.0 |
| Method | Bioinformatic analysis using VirusFinder |
| Wet Assay | No |
| Sample ID | 70 |
| Sample Name | 70N |
| Sample Type | Nontumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 22634754 |
| Journal | Nature GeNetics |
| Published Year | 2012 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr3 |
| Cytogenetic Band | p25.3 |
| Human Strand | |
| Human Integration Location Type | Intron2 |
| Hg19 Start | 9438781 |
| Hg19 End | 9438870 |
| Hg38 Start | 9397097 |
| Hg38 End | 9397186 |
| Junction Sequence | CCATTTGTGTTTTCACACACGGCGGGAGGAGAAACGGCCAATCGGCGACAAGAGGCTAGCCGGAAGCGCTCCTCCCTCTGCGAGAGCAA |
| Target Gene ▶ | |
| Target Gene | THUMPD3-AS1 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | NC_003977 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus (strain ayw) genome |
| Virus Genome Length | 3182 |
| Virus Breakpoint1 | - |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
| Predicted VIS Effect ▶ | |
| Transcript | Transcript 1: ENST00000468186.5, Transcript 2: ENST00000661342.1, Transcript 3: ENST00000741671.1, Transcript 4: ENST00000741673.1, Transcript 5: ENST00000741672.1, Transcript 6: ENST00000685076.3, Transcript 7: ENST00000741674.1, Transcript 8: ENST00000519043.5, Transcript 9: ENST00000657509.1, Transcript 10: ENST00000687342.2, Transcript 11: ENST00000702696.2, Transcript 12: ENST00000702536.2, Transcript 13: ENST00000741676.1, Transcript 14: ENST00000741684.1, Transcript 15: ENST00000741683.1, Transcript 16: ENST00000741681.1, Transcript 17: ENST00000521609.5, Transcript 18: ENST00000741679.1, Transcript 19: ENST00000741680.1, Transcript 20: ENST00000685952.2, Transcript 21: ENST00000741678.1, Transcript 22: ENST00000741677.1, Transcript 23: ENST00000741675.1, Transcript 24: ENST00000741685.1, Transcript 25: ENST00000741682.1, Transcript 26: ENST00000520629.5, Transcript 27: ENST00000654392.1, Transcript 28: ENST00000741686.1, Transcript 29: ENST00000467069.7, Transcript 30: ENST00000469846.5, Transcript 31: ENST00000522525.6, Transcript 32: ENST00000664441.3, Transcript 33: ENST00000665983.1, Transcript 34: ENST00000661714.1, Transcript 35: ENST00000660363.2, Transcript 36: ENST00000481221.8, Transcript 37: ENST00000667458.1, Transcript 38: ENST00000520447.1, Transcript 39: ENST00000524210.2, Transcript 40: ENST00000664273.1, Transcript 41: ENST00000741694.1, Transcript 42: ENST00000521267.5, Transcript 43: ENST00000741687.1, Transcript 44: ENST00000520396.1, Transcript 45: ENST00000494680.6, Transcript 46: ENST00000741693.1, Transcript 47: ENST00000741696.1, Transcript 48: ENST00000741688.1, Transcript 49: ENST00000741697.1, Transcript 50: ENST00000741700.1, Transcript 51: ENST00000489616.2, Transcript 52: ENST00000741690.1, Transcript 53: ENST00000741689.1, Transcript 54: ENST00000689821.2, Transcript 55: ENST00000518437.3, Transcript 56: ENST00000741691.1, Transcript 57: ENST00000741692.1, Transcript 58: ENST00000522221.2, Transcript 59: ENST00000480904.3, Transcript 60: ENST00000521708.2, Transcript 61: ENST00000498199.1, Transcript 62: ENST00000741702.1, Transcript 63: ENST00000741705.1, Transcript 64: ENST00000741706.1, Transcript 65: ENST00000741704.1, Transcript 66: ENST00000741703.1, Transcript 67: ENST00000741701.1, Transcript 68: ENST00000741699.1, Transcript 69: ENST00000741695.1, Transcript 70: ENST00000741708.1, Transcript 71: ENST00000741710.1, Transcript 72: ENST00000866905.1, Transcript 73: ENST00000431285.5, Transcript 74: ENST00000402198.7, Transcript 75: ENST00000866906.1, Transcript 76: ENST00000866907.1, Transcript 77: ENST00000683012.1, Transcript 78: ENST00000463180.5, Transcript 79: ENST00000478475.5, Transcript 80: ENST00000415650.5, Transcript 81: ENST00000682536.1, Transcript 82: ENST00000663774.1, Transcript 83: ENST00000683262.1, Transcript 84: ENST00000688835.1, Transcript 85: ENST00000691175.1, Transcript 86: ENST00000684606.1, Transcript 87: ENST00000691925.1, Transcript 88: ENST00000693430.1, Transcript 89: ENST00000665872.1, Transcript 90: ENST00000666307.1, Transcript 91: ENST00000443339.5, Transcript 92: ENST00000406341.5 |
| Transcript 1 Gene Id | ENSG00000206573.12 |
| Transcript 1 Gene Name | THUMPD3-AS1 |
| Transcript 1 Region | promoter |
| Transcript 1 Impact | promoter_insertion |
| Transcript 2 Gene Id | ENSG00000206573.12 |
| Transcript 2 Gene Name | THUMPD3-AS1 |
| Transcript 2 Region | intron |
| Transcript 2 Impact | intronic_insertion |
| Transcript 3 Gene Id | ENSG00000206573.12 |
| Transcript 3 Gene Name | THUMPD3-AS1 |
| Transcript 3 Region | intron |
| Transcript 3 Impact | intronic_insertion |
| Transcript 4 Gene Id | ENSG00000206573.12 |
| Transcript 4 Gene Name | THUMPD3-AS1 |
| Transcript 4 Region | promoter |
| Transcript 4 Impact | promoter_insertion |
| Transcript 5 Gene Id | ENSG00000206573.12 |
| Transcript 5 Gene Name | THUMPD3-AS1 |
| Transcript 5 Region | intron |
| Transcript 5 Impact | intronic_insertion |
| Transcript 6 Gene Id | ENSG00000206573.12 |
| Transcript 6 Gene Name | THUMPD3-AS1 |
| Transcript 6 Region | intron |
| Transcript 6 Impact | intronic_insertion |
| Transcript 7 Gene Id | ENSG00000206573.12 |
| Transcript 7 Gene Name | THUMPD3-AS1 |
| Transcript 7 Region | intron |
| Transcript 7 Impact | intronic_insertion |
| Transcript 8 Gene Id | ENSG00000206573.12 |
| Transcript 8 Gene Name | THUMPD3-AS1 |
| Transcript 8 Region | intron |
| Transcript 8 Impact | intronic_insertion |
| Transcript 9 Gene Id | ENSG00000206573.12 |
| Transcript 9 Gene Name | THUMPD3-AS1 |
| Transcript 9 Region | intron |
| Transcript 9 Impact | intronic_insertion |
| Transcript 10 Gene Id | ENSG00000206573.12 |
| Transcript 10 Gene Name | THUMPD3-AS1 |
| Transcript 10 Region | intron |
| Transcript 10 Impact | intronic_insertion |
| Transcript 11 Gene Id | ENSG00000206573.12 |
| Transcript 11 Gene Name | THUMPD3-AS1 |
| Transcript 11 Region | intron |
| Transcript 11 Impact | intronic_insertion |
| Transcript 12 Gene Id | ENSG00000206573.12 |
| Transcript 12 Gene Name | THUMPD3-AS1 |
| Transcript 12 Region | intron |
| Transcript 12 Impact | intronic_insertion |
| Transcript 13 Gene Id | ENSG00000206573.12 |
| Transcript 13 Gene Name | THUMPD3-AS1 |
| Transcript 13 Region | intron |
| Transcript 13 Impact | intronic_insertion |
| Transcript 14 Gene Id | ENSG00000206573.12 |
| Transcript 14 Gene Name | THUMPD3-AS1 |
| Transcript 14 Region | promoter |
| Transcript 14 Impact | promoter_insertion |
| Transcript 15 Gene Id | ENSG00000206573.12 |
| Transcript 15 Gene Name | THUMPD3-AS1 |
| Transcript 15 Region | promoter |
| Transcript 15 Impact | promoter_insertion |
| Transcript 16 Gene Id | ENSG00000206573.12 |
| Transcript 16 Gene Name | THUMPD3-AS1 |
| Transcript 16 Region | promoter |
| Transcript 16 Impact | promoter_insertion |
| Transcript 17 Gene Id | ENSG00000206573.12 |
| Transcript 17 Gene Name | THUMPD3-AS1 |
| Transcript 17 Region | intron |
| Transcript 17 Impact | intronic_insertion |
| Transcript 18 Gene Id | ENSG00000206573.12 |
| Transcript 18 Gene Name | THUMPD3-AS1 |
| Transcript 18 Region | intron |
| Transcript 18 Impact | intronic_insertion |
| Transcript 19 Gene Id | ENSG00000206573.12 |
| Transcript 19 Gene Name | THUMPD3-AS1 |
| Transcript 19 Region | intron |
| Transcript 19 Impact | intronic_insertion |
| Transcript 20 Gene Id | ENSG00000206573.12 |
| Transcript 20 Gene Name | THUMPD3-AS1 |
| Transcript 20 Region | intron |
| Transcript 20 Impact | intronic_insertion |
| Transcript 21 Gene Id | ENSG00000206573.12 |
| Transcript 21 Gene Name | THUMPD3-AS1 |
| Transcript 21 Region | intron |
| Transcript 21 Impact | intronic_insertion |
| Transcript 22 Gene Id | ENSG00000206573.12 |
| Transcript 22 Gene Name | THUMPD3-AS1 |
| Transcript 22 Region | intron |
| Transcript 22 Impact | intronic_insertion |
| Transcript 23 Gene Id | ENSG00000206573.12 |
| Transcript 23 Gene Name | THUMPD3-AS1 |
| Transcript 23 Region | intron |
| Transcript 23 Impact | intronic_insertion |
| Transcript 24 Gene Id | ENSG00000206573.12 |
| Transcript 24 Gene Name | THUMPD3-AS1 |
| Transcript 24 Region | intron |
| Transcript 24 Impact | intronic_insertion |
| Transcript 25 Gene Id | ENSG00000206573.12 |
| Transcript 25 Gene Name | THUMPD3-AS1 |
| Transcript 25 Region | promoter |
| Transcript 25 Impact | promoter_insertion |
| Transcript 26 Gene Id | ENSG00000206573.12 |
| Transcript 26 Gene Name | THUMPD3-AS1 |
| Transcript 26 Region | promoter |
| Transcript 26 Impact | promoter_insertion |
| Transcript 27 Gene Id | ENSG00000206573.12 |
| Transcript 27 Gene Name | THUMPD3-AS1 |
| Transcript 27 Region | promoter |
| Transcript 27 Impact | promoter_insertion |
| Transcript 28 Gene Id | ENSG00000206573.12 |
| Transcript 28 Gene Name | THUMPD3-AS1 |
| Transcript 28 Region | intron |
| Transcript 28 Impact | intronic_insertion |
| Transcript 29 Gene Id | ENSG00000206573.12 |
| Transcript 29 Gene Name | THUMPD3-AS1 |
| Transcript 29 Region | intron |
| Transcript 29 Impact | intronic_insertion |
| Transcript 30 Gene Id | ENSG00000206573.12 |
| Transcript 30 Gene Name | THUMPD3-AS1 |
| Transcript 30 Region | intron |
| Transcript 30 Impact | intronic_insertion |
| Transcript 31 Gene Id | ENSG00000206573.12 |
| Transcript 31 Gene Name | THUMPD3-AS1 |
| Transcript 31 Region | intron |
| Transcript 31 Impact | intronic_insertion |
| Transcript 32 Gene Id | ENSG00000206573.12 |
| Transcript 32 Gene Name | THUMPD3-AS1 |
| Transcript 32 Region | intron |
| Transcript 32 Impact | intronic_insertion |
| Transcript 33 Gene Id | ENSG00000206573.12 |
| Transcript 33 Gene Name | THUMPD3-AS1 |
| Transcript 33 Region | promoter |
| Transcript 33 Impact | promoter_insertion |
| Transcript 34 Gene Id | ENSG00000206573.12 |
| Transcript 34 Gene Name | THUMPD3-AS1 |
| Transcript 34 Region | intron |
| Transcript 34 Impact | intronic_insertion |
| Transcript 35 Gene Id | ENSG00000206573.12 |
| Transcript 35 Gene Name | THUMPD3-AS1 |
| Transcript 35 Region | intron |
| Transcript 35 Impact | intronic_insertion |
| Transcript 36 Gene Id | ENSG00000206573.12 |
| Transcript 36 Gene Name | THUMPD3-AS1 |
| Transcript 36 Region | intron |
| Transcript 36 Impact | intronic_insertion |
| Transcript 37 Gene Id | ENSG00000206573.12 |
| Transcript 37 Gene Name | THUMPD3-AS1 |
| Transcript 37 Region | intron |
| Transcript 37 Impact | intronic_insertion |
| Transcript 38 Gene Id | ENSG00000206573.12 |
| Transcript 38 Gene Name | THUMPD3-AS1 |
| Transcript 38 Region | intron |
| Transcript 38 Impact | intronic_insertion |
| Transcript 39 Gene Id | ENSG00000206573.12 |
| Transcript 39 Gene Name | THUMPD3-AS1 |
| Transcript 39 Region | promoter |
| Transcript 39 Impact | promoter_insertion |
| Transcript 40 Gene Id | ENSG00000206573.12 |
| Transcript 40 Gene Name | THUMPD3-AS1 |
| Transcript 40 Region | intron |
| Transcript 40 Impact | intronic_insertion |
| Transcript 41 Gene Id | ENSG00000206573.12 |
| Transcript 41 Gene Name | THUMPD3-AS1 |
| Transcript 41 Region | promoter |
| Transcript 41 Impact | promoter_insertion |
| Transcript 42 Gene Id | ENSG00000206573.12 |
| Transcript 42 Gene Name | THUMPD3-AS1 |
| Transcript 42 Region | promoter |
| Transcript 42 Impact | promoter_insertion |
| Transcript 43 Gene Id | ENSG00000206573.12 |
| Transcript 43 Gene Name | THUMPD3-AS1 |
| Transcript 43 Region | intron |
| Transcript 43 Impact | intronic_insertion |
| Transcript 44 Gene Id | ENSG00000206573.12 |
| Transcript 44 Gene Name | THUMPD3-AS1 |
| Transcript 44 Region | promoter |
| Transcript 44 Impact | promoter_insertion |
| Transcript 45 Gene Id | ENSG00000206573.12 |
| Transcript 45 Gene Name | THUMPD3-AS1 |
| Transcript 45 Region | intron |
| Transcript 45 Impact | intronic_insertion |
| Transcript 46 Gene Id | ENSG00000206573.12 |
| Transcript 46 Gene Name | THUMPD3-AS1 |
| Transcript 46 Region | exon_non_coding |
| Transcript 46 Impact | noncoding_exon_insertion |
| Transcript 47 Gene Id | ENSG00000206573.12 |
| Transcript 47 Gene Name | THUMPD3-AS1 |
| Transcript 47 Region | promoter |
| Transcript 47 Impact | promoter_insertion |
| Transcript 48 Gene Id | ENSG00000206573.12 |
| Transcript 48 Gene Name | THUMPD3-AS1 |
| Transcript 48 Region | intron |
| Transcript 48 Impact | intronic_insertion |
| Transcript 49 Gene Id | ENSG00000206573.12 |
| Transcript 49 Gene Name | THUMPD3-AS1 |
| Transcript 49 Region | promoter |
| Transcript 49 Impact | promoter_insertion |
| Transcript 50 Gene Id | ENSG00000206573.12 |
| Transcript 50 Gene Name | THUMPD3-AS1 |
| Transcript 50 Region | exon_non_coding |
| Transcript 50 Impact | noncoding_exon_insertion |
| Transcript 51 Gene Id | ENSG00000206573.12 |
| Transcript 51 Gene Name | THUMPD3-AS1 |
| Transcript 51 Region | promoter |
| Transcript 51 Impact | promoter_insertion |
| Transcript 52 Gene Id | ENSG00000206573.12 |
| Transcript 52 Gene Name | THUMPD3-AS1 |
| Transcript 52 Region | intron |
| Transcript 52 Impact | intronic_insertion |
| Transcript 53 Gene Id | ENSG00000206573.12 |
| Transcript 53 Gene Name | THUMPD3-AS1 |
| Transcript 53 Region | intron |
| Transcript 53 Impact | intronic_insertion |
| Transcript 54 Gene Id | ENSG00000206573.12 |
| Transcript 54 Gene Name | THUMPD3-AS1 |
| Transcript 54 Region | intron |
| Transcript 54 Impact | intronic_insertion |
| Transcript 55 Gene Id | ENSG00000206573.12 |
| Transcript 55 Gene Name | THUMPD3-AS1 |
| Transcript 55 Region | intron |
| Transcript 55 Impact | intronic_insertion |
| Transcript 56 Gene Id | ENSG00000206573.12 |
| Transcript 56 Gene Name | THUMPD3-AS1 |
| Transcript 56 Region | intron |
| Transcript 56 Impact | intronic_insertion |
| Transcript 57 Gene Id | ENSG00000206573.12 |
| Transcript 57 Gene Name | THUMPD3-AS1 |
| Transcript 57 Region | intron |
| Transcript 57 Impact | intronic_insertion |
| Transcript 58 Gene Id | ENSG00000206573.12 |
| Transcript 58 Gene Name | THUMPD3-AS1 |
| Transcript 58 Region | intron |
| Transcript 58 Impact | intronic_insertion |
| Transcript 59 Gene Id | ENSG00000206573.12 |
| Transcript 59 Gene Name | THUMPD3-AS1 |
| Transcript 59 Region | exon_non_coding |
| Transcript 59 Impact | noncoding_exon_insertion |
| Transcript 60 Gene Id | ENSG00000206573.12 |
| Transcript 60 Gene Name | THUMPD3-AS1 |
| Transcript 60 Region | intron |
| Transcript 60 Impact | intronic_insertion |
| Transcript 61 Gene Id | ENSG00000206573.12 |
| Transcript 61 Gene Name | THUMPD3-AS1 |
| Transcript 61 Region | promoter |
| Transcript 61 Impact | promoter_insertion |
| Transcript 62 Gene Id | ENSG00000206573.12 |
| Transcript 62 Gene Name | THUMPD3-AS1 |
| Transcript 62 Region | promoter |
| Transcript 62 Impact | promoter_insertion |
| Transcript 63 Gene Id | ENSG00000206573.12 |
| Transcript 63 Gene Name | THUMPD3-AS1 |
| Transcript 63 Region | promoter |
| Transcript 63 Impact | promoter_insertion |
| Transcript 64 Gene Id | ENSG00000206573.12 |
| Transcript 64 Gene Name | THUMPD3-AS1 |
| Transcript 64 Region | promoter |
| Transcript 64 Impact | promoter_insertion |
| Transcript 65 Gene Id | ENSG00000206573.12 |
| Transcript 65 Gene Name | THUMPD3-AS1 |
| Transcript 65 Region | promoter |
| Transcript 65 Impact | promoter_insertion |
| Transcript 66 Gene Id | ENSG00000206573.12 |
| Transcript 66 Gene Name | THUMPD3-AS1 |
| Transcript 66 Region | promoter |
| Transcript 66 Impact | promoter_insertion |
| Transcript 67 Gene Id | ENSG00000206573.12 |
| Transcript 67 Gene Name | THUMPD3-AS1 |
| Transcript 67 Region | promoter |
| Transcript 67 Impact | promoter_insertion |
| Transcript 68 Gene Id | ENSG00000206573.12 |
| Transcript 68 Gene Name | THUMPD3-AS1 |
| Transcript 68 Region | intron |
| Transcript 68 Impact | intronic_insertion |
| Transcript 69 Gene Id | ENSG00000206573.12 |
| Transcript 69 Gene Name | THUMPD3-AS1 |
| Transcript 69 Region | intron |
| Transcript 69 Impact | intronic_insertion |
| Transcript 70 Gene Id | ENSG00000206573.12 |
| Transcript 70 Gene Name | THUMPD3-AS1 |
| Transcript 70 Region | intron |
| Transcript 70 Impact | intronic_insertion |
| Transcript 71 Gene Id | ENSG00000206573.12 |
| Transcript 71 Gene Name | THUMPD3-AS1 |
| Transcript 71 Region | exon_non_coding |
| Transcript 71 Impact | noncoding_exon_insertion |
| Transcript 72 Gene Id | ENSG00000168137.21 |
| Transcript 72 Gene Name | SETD5 |
| Transcript 72 Region | promoter |
| Transcript 72 Impact | promoter_insertion |
| Transcript 73 Gene Id | ENSG00000168137.21 |
| Transcript 73 Gene Name | SETD5 |
| Transcript 73 Region | promoter |
| Transcript 73 Impact | promoter_insertion |
| Transcript 74 Gene Id | ENSG00000168137.21 |
| Transcript 74 Gene Name | SETD5 |
| Transcript 74 Region | promoter |
| Transcript 74 Impact | promoter_insertion |
| Transcript 75 Gene Id | ENSG00000168137.21 |
| Transcript 75 Gene Name | SETD5 |
| Transcript 75 Region | promoter |
| Transcript 75 Impact | promoter_insertion |
| Transcript 76 Gene Id | ENSG00000168137.21 |
| Transcript 76 Gene Name | SETD5 |
| Transcript 76 Region | promoter |
| Transcript 76 Impact | promoter_insertion |
| Transcript 77 Gene Id | ENSG00000168137.21 |
| Transcript 77 Gene Name | SETD5 |
| Transcript 77 Region | promoter |
| Transcript 77 Impact | promoter_insertion |
| Transcript 78 Gene Id | ENSG00000168137.21 |
| Transcript 78 Gene Name | SETD5 |
| Transcript 78 Region | promoter |
| Transcript 78 Impact | promoter_insertion |
| Transcript 79 Gene Id | ENSG00000168137.21 |
| Transcript 79 Gene Name | SETD5 |
| Transcript 79 Region | promoter |
| Transcript 79 Impact | promoter_insertion |
| Transcript 80 Gene Id | ENSG00000168137.21 |
| Transcript 80 Gene Name | SETD5 |
| Transcript 80 Region | promoter |
| Transcript 80 Impact | promoter_insertion |
| Transcript 81 Gene Id | ENSG00000168137.21 |
| Transcript 81 Gene Name | SETD5 |
| Transcript 81 Region | promoter |
| Transcript 81 Impact | promoter_insertion |
| Transcript 82 Gene Id | ENSG00000168137.21 |
| Transcript 82 Gene Name | SETD5 |
| Transcript 82 Region | promoter |
| Transcript 82 Impact | promoter_insertion |
| Transcript 83 Gene Id | ENSG00000168137.21 |
| Transcript 83 Gene Name | SETD5 |
| Transcript 83 Region | promoter |
| Transcript 83 Impact | promoter_insertion |
| Transcript 84 Gene Id | ENSG00000168137.21 |
| Transcript 84 Gene Name | SETD5 |
| Transcript 84 Region | promoter |
| Transcript 84 Impact | promoter_insertion |
| Transcript 85 Gene Id | ENSG00000168137.21 |
| Transcript 85 Gene Name | SETD5 |
| Transcript 85 Region | promoter |
| Transcript 85 Impact | promoter_insertion |
| Transcript 86 Gene Id | ENSG00000168137.21 |
| Transcript 86 Gene Name | SETD5 |
| Transcript 86 Region | promoter |
| Transcript 86 Impact | promoter_insertion |
| Transcript 87 Gene Id | ENSG00000168137.21 |
| Transcript 87 Gene Name | SETD5 |
| Transcript 87 Region | promoter |
| Transcript 87 Impact | promoter_insertion |
| Transcript 88 Gene Id | ENSG00000168137.21 |
| Transcript 88 Gene Name | SETD5 |
| Transcript 88 Region | promoter |
| Transcript 88 Impact | promoter_insertion |
| Transcript 89 Gene Id | ENSG00000168137.21 |
| Transcript 89 Gene Name | SETD5 |
| Transcript 89 Region | promoter |
| Transcript 89 Impact | promoter_insertion |
| Transcript 90 Gene Id | ENSG00000168137.21 |
| Transcript 90 Gene Name | SETD5 |
| Transcript 90 Region | promoter |
| Transcript 90 Impact | promoter_insertion |
| Transcript 91 Gene Id | ENSG00000168137.21 |
| Transcript 91 Gene Name | SETD5 |
| Transcript 91 Region | promoter |
| Transcript 91 Impact | promoter_insertion |
| Transcript 92 Gene Id | ENSG00000168137.21 |
| Transcript 92 Gene Name | SETD5 |
| Transcript 92 Region | promoter |
| Transcript 92 Impact | promoter_insertion |
| AlphaGenome Analysis | |
| Window | chr3:9331561-9462633 |
| RNA-seq Change (±2kb) | Mean: -0.00473677646368742 | Peak: 3.522216796875 |
| ATAC Change (±2kb) | Mean: 0.1202765479683876 | Peak: 200.1796875 |
| Interpretation | RNA-seq: minimal change -5.1% | Splice sites: no signal in region (REF≈0, ALT≈0) | ATAC: minimal change 9.1% |
| Visualization | |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D