Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10019989

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10019989
Fusion NameHBV unknown position integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR
Wet AssayYes
Sample IDGR10
Sample NameGR10
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID11593432
JournalOncogene
Published Year2001
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosome-
Cytogenetic Band-
Human Strand
Human Integration Location Type-
Hg19 Start-
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionV00866
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus complete DNA sequence (subtype adw)
Virus Genome Length3200
Virus Breakpoint11726
Virus Breakpoint21825
Virus Gene Name-
Virus Region Type-
Integrated Virus SequenceGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAATGATCTTTGTATTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTC
ViMIC ID-