| Basic Information ▶ | |
| VISDB ID | TVIS10019997 |
|---|---|
| Fusion Name | HBV-ATP2A1 integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | Alu PCR |
| Wet Assay | Yes |
| Sample ID | 86T |
| Sample Name | 86T |
| Sample Type | Tumor |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 11593432 |
| Journal | Oncogene |
| Published Year | 2001 |
| Human Genome ▶ | |
| Human Genome Version Description | U96773 |
| Human Genome RefSeq Accession | U96773 |
| Human Chromosome | chr16 |
| Cytogenetic Band | p12.1 |
| Human Strand | |
| Human Integration Location Type | exon3 |
| Hg19 Start | 1979 |
| Hg19 End | 2293 |
| Hg38 Start | - |
| Hg38 End | - |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | V00866 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus complete DNA sequence (subtype adw) |
| Virus Genome Length | 3200 |
| Virus Breakpoint1 | 1720 |
| Virus Breakpoint2 | 1819 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | GTTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAATGATCTTTGTATTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAAC |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D