| Basic Information ▶ | |
| VISDB ID | TVIS10020010 |
|---|---|
| Fusion Name | HBV-TERT integration |
| Validated | Yes |
| Curated Way | VISDB1.0 |
| Method | RT-PCR+Long-range PCR |
| Wet Assay | Yes |
| Sample ID | SNU449 |
| Sample Name | SNU449 |
| Sample Type | Cell line |
| Age | - |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 12802289 |
| Journal | Oncogene |
| Published Year | 2003 |
| Human Genome ▶ | |
| Human Genome Version Description | TERT |
| Human Genome RefSeq Accession | AY007685 |
| Human Chromosome | chr5 |
| Cytogenetic Band | p15.33 |
| Human Strand | |
| Human Integration Location Type | Intonic |
| Hg19 Start | 37133 |
| Hg19 End | 37137 |
| Hg38 Start | - |
| Hg38 End | - |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | C |
| Virus Genome Accession | AF330110 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus strain T-1858 genotype C, complete genome |
| Virus Genome Length | 3215 |
| Virus Breakpoint1 | 1216 |
| Virus Breakpoint2 | 436 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | TTGGTTCTTCTGGACTACCAAGGTATGTTGCCCGTTTGTCCTCTACTTCCAGGAACATCAACTACCAGCACGGGACCATGCAAGACCTGCACGAYTCCTGCTCAAGGAACCTCTATGTTTCCCTCTTGTTGCTGTACAAAACCTTCGGACGGAAACTGCACTTGTATTCCCATCCCATCATCCTGGGCTTTCGCAAGATTCCTATGGGAGTGGGCCTCAGTCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTT |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D